RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 LINC00469Q8N7U9 141 aa9.53□□□□□ -0.88
SS18L1-202ENST00000370848 MRPL35Q9NZE8 188 aaKnown RBP9.53□□□□□ -0.88
SS18L1-202ENST00000370848 TOMM7Q9P0U1 55 aa9.53□□□□□ -0.88
SS18L1-202ENST00000370848 TINCRA0A1B0GVN0 87 aa9.52□□□□□ -0.89
SS18L1-202ENST00000370848 NDUFA6P56556 154 aa9.52□□□□□ -0.89
SS18L1-202ENST00000370848 SEC11AP67812 179 aa9.52□□□□□ -0.89
SS18L1-202ENST00000370848 PLA2G2DQ9UNK4 145 aa9.52□□□□□ -0.89
SS18L1-202ENST00000370848 IGLV5-45A0A087WSX0 123 aa9.51□□□□□ -0.89
SS18L1-202ENST00000370848 SMIM1B2RUZ4 78 aa9.51□□□□□ -0.89
SS18L1-202ENST00000370848 LINC00310P59036 64 aa9.51□□□□□ -0.89
SS18L1-202ENST00000370848 RNF151Q2KHN1 245 aa9.51□□□□□ -0.89
SS18L1-202ENST00000370848 CHCHD1Q96BP2 118 aaKnown RBP9.51□□□□□ -0.89
SS18L1-202ENST00000370848 PACRGQ96M98 296 aaPredicted RBP9.51□□□□□ -0.89
SS18L1-202ENST00000370848 F8WDY8 70 aa9.5□□□□□ -0.89
SS18L1-202ENST00000370848 SPINK8P0C7L1 97 aa9.5□□□□□ -0.89
SS18L1-202ENST00000370848 BAGE3Q86Y29 109 aa9.5□□□□□ -0.89
SS18L1-202ENST00000370848 PKIGQ9Y2B9 76 aa9.5□□□□□ -0.89
SS18L1-202ENST00000370848 A0A1W2PNN7 141 aa9.49□□□□□ -0.89
SS18L1-202ENST00000370848 IGLC3P0DOY3 106 aa9.49□□□□□ -0.89
SS18L1-202ENST00000370848 C9orf116Q5BN46 136 aaPredicted RBP9.49□□□□□ -0.89
SS18L1-202ENST00000370848 Q8IZM0 81 aa9.49□□□□□ -0.89
SS18L1-202ENST00000370848 FAM19A2Q8N3H0 131 aa9.49□□□□□ -0.89
SS18L1-202ENST00000370848 ATP5LO75964 103 aa9.48□□□□□ -0.89
SS18L1-202ENST00000370848 PRSS2P07478 247 aa9.48□□□□□ -0.89
SS18L1-202ENST00000370848 Q6ZRP5 223 aa9.48□□□□□ -0.89
SS18L1-202ENST00000370848 LINC00474Q9P2X8 69 aa9.48□□□□□ -0.89
SS18L1-202ENST00000370848 NUPR1O60356 82 aa9.47□□□□□ -0.89
SS18L1-202ENST00000370848 SERF1AO75920 110 aa9.47□□□□□ -0.89
SS18L1-202ENST00000370848 S100A1P23297 94 aa9.47□□□□□ -0.89
SS18L1-202ENST00000370848 C6orf226Q5I0X4 101 aa9.47□□□□□ -0.89
SS18L1-202ENST00000370848 LRP2P98164 4655 aa9.46□□□□□ -0.89
SS18L1-202ENST00000370848 TRBV30A0A0K0K1B3 111 aa9.46□□□□□ -0.9
SS18L1-202ENST00000370848 HSBP1O75506 76 aa9.46□□□□□ -0.9
SS18L1-202ENST00000370848 TLX1NBP0CAT3 122 aa9.46□□□□□ -0.9
SS18L1-202ENST00000370848 ZNF22P17026 224 aaPredicted RBP9.46□□□□□ -0.9
SS18L1-202ENST00000370848 CKS1BP61024 79 aa9.46□□□□□ -0.9
SS18L1-202ENST00000370848 GAGE2EQ4V326 116 aa9.46□□□□□ -0.9
SS18L1-202ENST00000370848 GAGE2DQ9UEU5 116 aa9.46□□□□□ -0.9
SS18L1-202ENST00000370848 FAM168BA1KXE4 195 aa9.45□□□□□ -0.9
SS18L1-202ENST00000370848 C11orf86A6NJI1 115 aa9.45□□□□□ -0.9
SS18L1-202ENST00000370848 COX7B2Q8TF08 81 aa9.45□□□□□ -0.9
SS18L1-202ENST00000370848 IFI27L1Q96BM0 104 aa9.45□□□□□ -0.9
SS18L1-202ENST00000370848 C7orf33Q8WU49 177 aa9.43□□□□□ -0.9
SS18L1-202ENST00000370848 CHTOPQ9Y3Y2 248 aaKnown RBP9.43□□□□□ -0.9
SS18L1-202ENST00000370848 NDUFC2-KCTD14E9PQ53 114 aa9.42□□□□□ -0.9
SS18L1-202ENST00000370848 F8VRH5 84 aa9.42□□□□□ -0.9
SS18L1-202ENST00000370848 H3BRM9 83 aa9.42□□□□□ -0.9
SS18L1-202ENST00000370848 PHF5AQ7RTV0 110 aaKnown RBP9.42□□□□□ -0.9
SS18L1-202ENST00000370848 KRTAP7-1Q8IUC3 87 aa9.42□□□□□ -0.9
SS18L1-202ENST00000370848 IGLV5-39A0A0G2JS06 123 aa9.41□□□□□ -0.9
SS18L1-202ENST00000370848 C9orf129Q5T035 196 aaKnown RBP9.41□□□□□ -0.9
SS18L1-202ENST00000370848 FAM19A5Q7Z5A7 132 aaPredicted RBP9.41□□□□□ -0.9
SS18L1-202ENST00000370848 TRAV12-1A0A0B4J245 112 aa9.4□□□□□ -0.9
SS18L1-202ENST00000370848 H0Y8G0 127 aa9.4□□□□□ -0.9
SS18L1-202ENST00000370848 CXCL5P42830 114 aa9.4□□□□□ -0.9
SS18L1-202ENST00000370848 PRR3P79522 188 aaKnown RBP9.4□□□□□ -0.9
SS18L1-202ENST00000370848 TMEM170BQ5T4T1 132 aa9.4□□□□□ -0.9
SS18L1-202ENST00000370848 HIST1H2BKO60814 126 aa9.39□□□□□ -0.91
SS18L1-202ENST00000370848 HIST1H2BJP06899 126 aa9.39□□□□□ -0.91
SS18L1-202ENST00000370848 HIST1H2BOP23527 126 aa9.39□□□□□ -0.91
SS18L1-202ENST00000370848 HIST1H2BBP33778 126 aa9.39□□□□□ -0.91
SS18L1-202ENST00000370848 HIST1H2BDP58876 126 aa9.39□□□□□ -0.91
SS18L1-202ENST00000370848 HIST1H2BCP62807 126 aa9.39□□□□□ -0.91
SS18L1-202ENST00000370848 HIST2H2BEQ16778 126 aa9.39□□□□□ -0.91
SS18L1-202ENST00000370848 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.39□□□□□ -0.91
SS18L1-202ENST00000370848 HIST1H2BHQ93079 126 aa9.39□□□□□ -0.91
SS18L1-202ENST00000370848 LINC01600Q96MT4 127 aa9.39□□□□□ -0.91
SS18L1-202ENST00000370848 HIST1H2BNQ99877 126 aa9.39□□□□□ -0.91
SS18L1-202ENST00000370848 HIST1H2BMQ99879 126 aa9.39□□□□□ -0.91
SS18L1-202ENST00000370848 ATP6V1G1O75348 118 aa9.38□□□□□ -0.91
SS18L1-202ENST00000370848 LEPROTL1O95214 131 aa9.38□□□□□ -0.91
SS18L1-202ENST00000370848 FABP4P15090 132 aa9.38□□□□□ -0.91
SS18L1-202ENST00000370848 XAGE1AQ9HD64 81 aa9.38□□□□□ -0.91
SS18L1-202ENST00000370848 ODF1Q14990 250 aa9.37□□□□□ -0.91
SS18L1-202ENST00000370848 KRTAP11-1Q8IUC1 163 aa9.37□□□□□ -0.91
SS18L1-202ENST00000370848 RNF213Q63HN8 5207 aa9.36□□□□□ -0.91
SS18L1-202ENST00000370848 TMEM223A0PJW6 202 aa9.35□□□□□ -0.91
SS18L1-202ENST00000370848 M0QXV9 152 aa9.34□□□□□ -0.91
SS18L1-202ENST00000370848 PMCHL2Q9BQD1 86 aa9.34□□□□□ -0.91
SS18L1-202ENST00000370848 HSPB8Q9UJY1 196 aa9.34□□□□□ -0.91
SS18L1-202ENST00000370848 ZNF625Q96I27 306 aaPredicted RBP9.33□□□□□ -0.92
SS18L1-202ENST00000370848 PSORS1C2Q9UIG4 136 aa9.33□□□□□ -0.92
SS18L1-202ENST00000370848 PFN2P35080 140 aa9.32□□□□□ -0.92
SS18L1-202ENST00000370848 KRTAP10-8P60410 259 aa9.31□□□□□ -0.92
SS18L1-202ENST00000370848 SRSF9Q13242 221 aaKnown RBP eCLIP9.31□□□□□ -0.92
SS18L1-202ENST00000370848 SPINK6Q6UWN8 80 aa9.31□□□□□ -0.92
SS18L1-202ENST00000370848 ERG28Q9UKR5 140 aa9.3□□□□□ -0.92
SS18L1-202ENST00000370848 C1orf137Q5JT78 98 aa9.29□□□□□ -0.92
SS18L1-202ENST00000370848 C22orf24Q9Y442 160 aa9.29□□□□□ -0.92
SS18L1-202ENST00000370848 TSPEAR-AS2P59090 65 aa9.28□□□□□ -0.92
SS18L1-202ENST00000370848 UBE2BP63146 152 aa9.28□□□□□ -0.92
SS18L1-202ENST00000370848 MAP1LC3CQ9BXW4 147 aa9.27□□□□□ -0.93
SS18L1-202ENST00000370848 A0A0U1RRA0 63 aa9.26□□□□□ -0.93
SS18L1-202ENST00000370848 DPM2O94777 84 aa9.26□□□□□ -0.93
SS18L1-202ENST00000370848 PLNP26678 52 aa9.26□□□□□ -0.93
SS18L1-202ENST00000370848 COA6Q5JTJ3 125 aaKnown RBP9.26□□□□□ -0.93
SS18L1-202ENST00000370848 REG3GQ6UW15 175 aa9.26□□□□□ -0.93
SS18L1-202ENST00000370848 IGKCP01834 107 aa9.25□□□□□ -0.93
SS18L1-202ENST00000370848 SND1-IT1Q9HBX3 110 aa9.25□□□□□ -0.93
SS18L1-202ENST00000370848 GAGE10A6NGK3 116 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms