RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 CCKP06307 115 aa12.15□□□□□ -0.47
CHUK-201ENST00000370397 C16orf74Q96GX8 76 aa12.13□□□□□ -0.47
CHUK-201ENST00000370397 LINC00959A0A1B0GUT2 108 aa12.13□□□□□ -0.47
CHUK-201ENST00000370397 PFN2P35080 140 aa12.13□□□□□ -0.47
CHUK-201ENST00000370397 WFDC10AQ9H1F0 79 aa12.13□□□□□ -0.47
CHUK-201ENST00000370397 JMJD1CQ15652 2540 aa12.13□□□□□ -0.47
CHUK-201ENST00000370397 KIR2DL5BQ8NHK3 375 aa12.12□□□□□ -0.47
CHUK-201ENST00000370397 USP17L23D6RBM5 183 aa12.12□□□□□ -0.47
CHUK-201ENST00000370397 DPH3Q96FX2 82 aa12.11□□□□□ -0.47
CHUK-201ENST00000370397 Q8NDZ9 215 aa12.11□□□□□ -0.47
CHUK-201ENST00000370397 WNK1Q9H4A3 2382 aa12.11□□□□□ -0.47
CHUK-201ENST00000370397 IGKV3OR2-268A0A0C4DH90 116 aa12.1□□□□□ -0.47
CHUK-201ENST00000370397 KHDC1LQ5JSQ8 128 aa12.1□□□□□ -0.47
CHUK-201ENST00000370397 TLN2Q9Y4G6 2542 aa12.1□□□□□ -0.47
CHUK-201ENST00000370397 ORMDL1Q9P0S3 153 aa12.1□□□□□ -0.47
CHUK-201ENST00000370397 Q8N814 137 aa12.09□□□□□ -0.47
CHUK-201ENST00000370397 PAX4O43316 350 aa12.09□□□□□ -0.47
CHUK-201ENST00000370397 TMEM258P61165 79 aa12.09□□□□□ -0.47
CHUK-201ENST00000370397 HILS1P60008 231 aa12.08□□□□□ -0.48
CHUK-201ENST00000370397 TRGV2A0A075B6R0 118 aa12.07□□□□□ -0.48
CHUK-201ENST00000370397 PRR3P79522 188 aaKnown RBP12.07□□□□□ -0.48
CHUK-201ENST00000370397 Q8IZM0 81 aa12.07□□□□□ -0.48
CHUK-201ENST00000370397 KIAA0087Q14695 138 aa12.07□□□□□ -0.48
CHUK-201ENST00000370397 LRRK2Q5S007 2527 aa12.06□□□□□ -0.48
CHUK-201ENST00000370397 APCP25054 2843 aa12.06□□□□□ -0.48
CHUK-201ENST00000370397 KRTAP1-3Q8IUG1 177 aa12.06□□□□□ -0.48
CHUK-201ENST00000370397 CCL24O00175 119 aa12.06□□□□□ -0.48
CHUK-201ENST00000370397 KRTAP10-9P60411 292 aa12.05□□□□□ -0.48
CHUK-201ENST00000370397 LINC00612Q8N6U2 182 aa12.05□□□□□ -0.48
CHUK-201ENST00000370397 SMIM9A6NGZ8 99 aa12.05□□□□□ -0.48
CHUK-201ENST00000370397 TRGV4A0A0C4DH28 118 aa12.04□□□□□ -0.48
CHUK-201ENST00000370397 A0A1B0GUV1 79 aa12.04□□□□□ -0.48
CHUK-201ENST00000370397 NDUFC2O95298 119 aa12.03□□□□□ -0.48
CHUK-201ENST00000370397 OR13C6PQ8NH95 151 aa12.03□□□□□ -0.48
CHUK-201ENST00000370397 WFDC9Q8NEX5 89 aa12.03□□□□□ -0.48
CHUK-201ENST00000370397 C11orf68Q9H3H3 251 aaKnown RBP12.03□□□□□ -0.48
CHUK-201ENST00000370397 A0A1W2PRX2 142 aa12.03□□□□□ -0.48
CHUK-201ENST00000370397 C11orf44Q8N8P7 122 aa12.02□□□□□ -0.49
CHUK-201ENST00000370397 ITPR3Q14573 2671 aa12.02□□□□□ -0.49
CHUK-201ENST00000370397 JMJD7-PLA2G4BH0Y9G9 81 aa12.01□□□□□ -0.49
CHUK-201ENST00000370397 FAM19A1Q7Z5A9 133 aa12.01□□□□□ -0.49
CHUK-201ENST00000370397 TMEM86BQ8N661 226 aa12.01□□□□□ -0.49
CHUK-201ENST00000370397 ESM1Q9NQ30 184 aa12.01□□□□□ -0.49
CHUK-201ENST00000370397 C6orf226Q5I0X4 101 aa12.01□□□□□ -0.49
CHUK-201ENST00000370397 ATP5EP2Q5VTU8 51 aa12.01□□□□□ -0.49
CHUK-201ENST00000370397 IGLV1-51P01701 117 aa12□□□□□ -0.49
CHUK-201ENST00000370397 XCL1P47992 114 aa12□□□□□ -0.49
CHUK-201ENST00000370397 DSCR8Q96T75 97 aa12□□□□□ -0.49
CHUK-201ENST00000370397 IGHV4-28A0A0C4DH34 117 aa12□□□□□ -0.49
CHUK-201ENST00000370397 Q5XG85 94 aa12□□□□□ -0.49
CHUK-201ENST00000370397 PTPN13Q12923 2485 aa12□□□□□ -0.49
CHUK-201ENST00000370397 RPL35AP18077 110 aaKnown RBP11.99□□□□□ -0.49
CHUK-201ENST00000370397 C5orf47Q569G3 176 aa11.99□□□□□ -0.49
CHUK-201ENST00000370397 HELZ2Q9BYK8 2649 aaKnown RBP11.99□□□□□ -0.49
CHUK-201ENST00000370397 ABCA12Q86UK0 2595 aa11.99□□□□□ -0.49
CHUK-201ENST00000370397 TMEM256-PLSCR3K7ERE1 68 aa11.99□□□□□ -0.49
CHUK-201ENST00000370397 DNAJC9-AS1A6NH13 148 aa11.99□□□□□ -0.49
CHUK-201ENST00000370397 TRBV10-3A0A0K0K1G6 114 aa11.98□□□□□ -0.49
CHUK-201ENST00000370397 M0R2N4 97 aa11.97□□□□□ -0.49
CHUK-201ENST00000370397 COX17Q14061 63 aa11.97□□□□□ -0.49
CHUK-201ENST00000370397 Q6ZQT0 140 aa11.97□□□□□ -0.49
CHUK-201ENST00000370397 SPATA3Q8NHX4 192 aa11.97□□□□□ -0.49
CHUK-201ENST00000370397 EPM2AB3EWF7 344 aa11.96□□□□□ -0.49
CHUK-201ENST00000370397 ENHOQ6UWT2 76 aa11.96□□□□□ -0.5
CHUK-201ENST00000370397 NAV2Q8IVL1 2488 aa11.95□□□□□ -0.5
CHUK-201ENST00000370397 GCN1Q92616 2671 aaKnown RBP11.95□□□□□ -0.5
CHUK-201ENST00000370397 DEFB113Q30KQ7 82 aa11.95□□□□□ -0.5
CHUK-201ENST00000370397 LINC00575Q6W349 94 aa11.95□□□□□ -0.5
CHUK-201ENST00000370397 GHRHP01286 108 aa11.94□□□□□ -0.5
CHUK-201ENST00000370397 C9orf116Q5BN46 136 aaPredicted RBP11.94□□□□□ -0.5
CHUK-201ENST00000370397 NBEAL2Q6ZNJ1 2754 aa11.94□□□□□ -0.5
CHUK-201ENST00000370397 TRAV23DV6A0A075B6W5 121 aa11.94□□□□□ -0.5
CHUK-201ENST00000370397 LOC110117498A0A087WWA1 95 aa11.94□□□□□ -0.5
CHUK-201ENST00000370397 S100A7L2Q5SY68 101 aa11.94□□□□□ -0.5
CHUK-201ENST00000370397 CLPSL2Q6UWE3 100 aa11.94□□□□□ -0.5
CHUK-201ENST00000370397 CMC4P56277 68 aaPredicted RBP11.93□□□□□ -0.5
CHUK-201ENST00000370397 Q8N3U1 123 aa11.93□□□□□ -0.5
CHUK-201ENST00000370397 GYPEP15421 78 aa11.93□□□□□ -0.5
CHUK-201ENST00000370397 C6orf99Q4VX62 202 aa11.93□□□□□ -0.5
CHUK-201ENST00000370397 NDUFC2-KCTD14E9PQ53 114 aa11.91□□□□□ -0.5
CHUK-201ENST00000370397 C6orf223Q8N319 242 aa11.91□□□□□ -0.5
CHUK-201ENST00000370397 CD164L2Q6UWJ8 174 aa11.91□□□□□ -0.5
CHUK-201ENST00000370397 WIPF1O43516 503 aa11.91□□□□□ -0.5
CHUK-201ENST00000370397 X6R8D5 127 aa11.9□□□□□ -0.5
CHUK-201ENST00000370397 SONP18583 2426 aaKnown RBP11.89□□□□□ -0.51
CHUK-201ENST00000370397 VWFP04275 2813 aa11.89□□□□□ -0.51
CHUK-201ENST00000370397 DEFB130BP0DP73 79 aa11.88□□□□□ -0.51
CHUK-201ENST00000370397 DEFB130AP0DP74 79 aa11.88□□□□□ -0.51
CHUK-201ENST00000370397 C4orf26Q17RF5 130 aa11.88□□□□□ -0.51
CHUK-201ENST00000370397 LINC01006Q8NI28 216 aa11.88□□□□□ -0.51
CHUK-201ENST00000370397 IGLV6-57P01721 117 aa11.88□□□□□ -0.51
CHUK-201ENST00000370397 LINC00269Q8N2A0 174 aa11.88□□□□□ -0.51
CHUK-201ENST00000370397 LINC00482Q8N8I6 264 aa11.88□□□□□ -0.51
CHUK-201ENST00000370397 PDZD2O15018 2839 aa11.88□□□□□ -0.51
CHUK-201ENST00000370397 H7BZZ5 65 aa11.87□□□□□ -0.51
CHUK-201ENST00000370397 C10orf25Q5T742 122 aa11.87□□□□□ -0.51
CHUK-201ENST00000370397 CHCHD10Q8WYQ3 142 aaPredicted RBP11.87□□□□□ -0.51
CHUK-201ENST00000370397 C9orf66Q5T8R8 295 aa11.86□□□□□ -0.51
CHUK-201ENST00000370397 C16orf95Q9H693 158 aa11.86□□□□□ -0.51
CHUK-201ENST00000370397 ZNF561-AS1K7EIQ3 104 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms