RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 TRAPPC1Q9Y5R8 145 aa12.73□□□□□ -0.37
SMNDC1-201ENST00000369592 NDUFA5Q16718 116 aa12.72□□□□□ -0.37
SMNDC1-201ENST00000369592 FA2HQ7L5A8 372 aa12.72□□□□□ -0.37
SMNDC1-201ENST00000369592 Q8IZM0 81 aa12.72□□□□□ -0.37
SMNDC1-201ENST00000369592 CST9LQ9H4G1 147 aa12.72□□□□□ -0.37
SMNDC1-201ENST00000369592 TINCRA0A1B0GVN0 87 aa12.71□□□□□ -0.37
SMNDC1-201ENST00000369592 SRSF9Q13242 221 aaKnown RBP eCLIP12.71□□□□□ -0.37
SMNDC1-201ENST00000369592 KRTAP7-1Q8IUC3 87 aa12.71□□□□□ -0.37
SMNDC1-201ENST00000369592 GEMIN7Q9H840 131 aaKnown RBP12.69□□□□□ -0.38
SMNDC1-201ENST00000369592 TNXBP22105 4242 aa12.68□□□□□ -0.38
SMNDC1-201ENST00000369592 SMCO4Q9NRQ5 59 aa12.68□□□□□ -0.38
SMNDC1-201ENST00000369592 FAM168BA1KXE4 195 aa12.67□□□□□ -0.38
SMNDC1-201ENST00000369592 SMIM1B2RUZ4 78 aa12.67□□□□□ -0.38
SMNDC1-201ENST00000369592 NDUFC2-KCTD14E9PQ53 114 aa12.67□□□□□ -0.38
SMNDC1-201ENST00000369592 LINC00614P0C842 121 aa12.67□□□□□ -0.38
SMNDC1-201ENST00000369592 PMVKQ15126 192 aa12.67□□□□□ -0.38
SMNDC1-201ENST00000369592 PHF5AQ7RTV0 110 aaKnown RBP12.66□□□□□ -0.38
SMNDC1-201ENST00000369592 LCE2BO14633 110 aa12.65□□□□□ -0.38
SMNDC1-201ENST00000369592 PRSS2P07478 247 aa12.65□□□□□ -0.38
SMNDC1-201ENST00000369592 PDZD11Q5EBL8 140 aa12.65□□□□□ -0.38
SMNDC1-201ENST00000369592 C6orf226Q5I0X4 101 aa12.65□□□□□ -0.38
SMNDC1-201ENST00000369592 C9orf129Q5T035 196 aaKnown RBP12.65□□□□□ -0.38
SMNDC1-201ENST00000369592 PACRGQ96M98 296 aaPredicted RBP12.65□□□□□ -0.38
SMNDC1-201ENST00000369592 TOMM7Q9P0U1 55 aa12.65□□□□□ -0.38
SMNDC1-201ENST00000369592 GAGE2EQ4V326 116 aa12.64□□□□□ -0.39
SMNDC1-201ENST00000369592 SPINK6Q6UWN8 80 aa12.64□□□□□ -0.39
SMNDC1-201ENST00000369592 KRTAP11-1Q8IUC1 163 aa12.64□□□□□ -0.39
SMNDC1-201ENST00000369592 LINC00469Q8N7U9 141 aa12.64□□□□□ -0.39
SMNDC1-201ENST00000369592 GAGE2DQ9UEU5 116 aa12.64□□□□□ -0.39
SMNDC1-201ENST00000369592 PSORS1C2Q9UIG4 136 aa12.64□□□□□ -0.39
SMNDC1-201ENST00000369592 CKS1BP61024 79 aa12.63□□□□□ -0.39
SMNDC1-201ENST00000369592 IGLC3P0DOY3 106 aa12.62□□□□□ -0.39
SMNDC1-201ENST00000369592 F8VRH5 84 aa12.61□□□□□ -0.39
SMNDC1-201ENST00000369592 HBDP02042 147 aa12.61□□□□□ -0.39
SMNDC1-201ENST00000369592 LINC01600Q96MT4 127 aa12.61□□□□□ -0.39
SMNDC1-201ENST00000369592 CXCL5P42830 114 aa12.6□□□□□ -0.39
SMNDC1-201ENST00000369592 ODF1Q14990 250 aa12.6□□□□□ -0.39
SMNDC1-201ENST00000369592 RAB5BP61020 215 aa12.59□□□□□ -0.39
SMNDC1-201ENST00000369592 PMCHL1Q16048 86 aa12.59□□□□□ -0.39
SMNDC1-201ENST00000369592 FAM19A5Q7Z5A7 132 aaPredicted RBP12.59□□□□□ -0.39
SMNDC1-201ENST00000369592 CBLN2Q8IUK8 224 aa12.59□□□□□ -0.39
SMNDC1-201ENST00000369592 COX7B2Q8TF08 81 aa12.59□□□□□ -0.39
SMNDC1-201ENST00000369592 RNF213Q63HN8 5207 aa12.58□□□□□ -0.39
SMNDC1-201ENST00000369592 IGLV5-39A0A0G2JS06 123 aa12.58□□□□□ -0.4
SMNDC1-201ENST00000369592 SPINK8P0C7L1 97 aa12.57□□□□□ -0.4
SMNDC1-201ENST00000369592 SLC7A5P1Q8MH63 180 aa12.56□□□□□ -0.4
SMNDC1-201ENST00000369592 ATP5LO75964 103 aa12.55□□□□□ -0.4
SMNDC1-201ENST00000369592 ZNF22P17026 224 aaPredicted RBP12.55□□□□□ -0.4
SMNDC1-201ENST00000369592 M0QXV9 152 aa12.54□□□□□ -0.4
SMNDC1-201ENST00000369592 KRTAP10-8P60410 259 aa12.54□□□□□ -0.4
SMNDC1-201ENST00000369592 C1orf137Q5JT78 98 aa12.54□□□□□ -0.4
SMNDC1-201ENST00000369592 CHCHD1Q96BP2 118 aaKnown RBP12.54□□□□□ -0.4
SMNDC1-201ENST00000369592 H3BRM9 83 aa12.53□□□□□ -0.4
SMNDC1-201ENST00000369592 IGLV7-43P04211 117 aa12.52□□□□□ -0.41
SMNDC1-201ENST00000369592 REG3GQ6UW15 175 aa12.52□□□□□ -0.41
SMNDC1-201ENST00000369592 XAGE1AQ9HD64 81 aa12.52□□□□□ -0.41
SMNDC1-201ENST00000369592 C11orf86A6NJI1 115 aa12.51□□□□□ -0.41
SMNDC1-201ENST00000369592 NDUFA6P56556 154 aa12.5□□□□□ -0.41
SMNDC1-201ENST00000369592 BAGE3Q86Y29 109 aa12.5□□□□□ -0.41
SMNDC1-201ENST00000369592 C22orf24Q9Y442 160 aa12.5□□□□□ -0.41
SMNDC1-201ENST00000369592 TP73-AS1Q9UF72 201 aa12.49□□□□□ -0.41
SMNDC1-201ENST00000369592 TRGC2P03986 189 aa12.48□□□□□ -0.41
SMNDC1-201ENST00000369592 TRAV12-1A0A0B4J245 112 aa12.47□□□□□ -0.41
SMNDC1-201ENST00000369592 LINC00310P59036 64 aa12.47□□□□□ -0.41
SMNDC1-201ENST00000369592 COLCA2A8K830 154 aa12.46□□□□□ -0.41
SMNDC1-201ENST00000369592 IFI27L1Q96BM0 104 aa12.46□□□□□ -0.41
SMNDC1-201ENST00000369592 LRP2P98164 4655 aa12.44□□□□□ -0.42
SMNDC1-201ENST00000369592 IGLV5-37A0A075B6J1 123 aa12.44□□□□□ -0.42
SMNDC1-201ENST00000369592 UBE2BP63146 152 aa12.44□□□□□ -0.42
SMNDC1-201ENST00000369592 CHTOPQ9Y3Y2 248 aaKnown RBP12.44□□□□□ -0.42
SMNDC1-201ENST00000369592 DIRC1Q969H9 104 aa12.43□□□□□ -0.42
SMNDC1-201ENST00000369592 ZNF625Q96I27 306 aaPredicted RBP12.43□□□□□ -0.42
SMNDC1-201ENST00000369592 H0Y9J4 135 aa12.42□□□□□ -0.42
SMNDC1-201ENST00000369592 LBHQ53QV2 105 aaPredicted RBP12.42□□□□□ -0.42
SMNDC1-201ENST00000369592 MRPL55Q7Z7F7 128 aaKnown RBP12.42□□□□□ -0.42
SMNDC1-201ENST00000369592 FAM19A2Q8N3H0 131 aa12.42□□□□□ -0.42
SMNDC1-201ENST00000369592 TMEM223A0PJW6 202 aa12.41□□□□□ -0.42
SMNDC1-201ENST00000369592 TMEM170BQ5T4T1 132 aa12.41□□□□□ -0.42
SMNDC1-201ENST00000369592 HSBP1O75506 76 aa12.4□□□□□ -0.42
SMNDC1-201ENST00000369592 NUPR1O60356 82 aa12.39□□□□□ -0.43
SMNDC1-201ENST00000369592 SERF1AO75920 110 aa12.39□□□□□ -0.43
SMNDC1-201ENST00000369592 KRTAP1-4P0C5Y4 121 aa12.39□□□□□ -0.43
SMNDC1-201ENST00000369592 COX17Q14061 63 aa12.39□□□□□ -0.43
SMNDC1-201ENST00000369592 LINC00167Q96N53 147 aa12.39□□□□□ -0.43
SMNDC1-201ENST00000369592 ERG28Q9UKR5 140 aa12.39□□□□□ -0.43
SMNDC1-201ENST00000369592 PFN2P35080 140 aa12.37□□□□□ -0.43
SMNDC1-201ENST00000369592 SFTA2Q6UW10 78 aa12.37□□□□□ -0.43
SMNDC1-201ENST00000369592 ZNF861PO60384 105 aa12.36□□□□□ -0.43
SMNDC1-201ENST00000369592 SND1-IT1Q9HBX3 110 aa12.36□□□□□ -0.43
SMNDC1-201ENST00000369592 VPREB1P12018 145 aa12.34□□□□□ -0.43
SMNDC1-201ENST00000369592 LEPROTL1O95214 131 aa12.33□□□□□ -0.44
SMNDC1-201ENST00000369592 Q8NDZ9 215 aa12.33□□□□□ -0.44
SMNDC1-201ENST00000369592 BCE1O60756 84 aa12.32□□□□□ -0.44
SMNDC1-201ENST00000369592 PRR26Q8N8Z3 221 aa12.32□□□□□ -0.44
SMNDC1-201ENST00000369592 RPL37AP8A6NKH3 93 aa12.31□□□□□ -0.44
SMNDC1-201ENST00000369592 KRTAP13-1Q8IUC0 172 aa12.31□□□□□ -0.44
SMNDC1-201ENST00000369592 GAGE10A6NGK3 116 aa12.3□□□□□ -0.44
SMNDC1-201ENST00000369592 SCO1O75880 301 aa12.3□□□□□ -0.44
SMNDC1-201ENST00000369592 IGLV1-50A0A075B6I6 118 aa12.29□□□□□ -0.44
SMNDC1-201ENST00000369592 NKAPP1Q8N9T2 125 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms