RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 BAGE3Q86Y29 109 aa11.7□□□□□ -0.54
CHTOP-202ENST00000368687 TOMM7Q9P0U1 55 aa11.7□□□□□ -0.54
CHTOP-202ENST00000368687 TRGC2P03986 189 aa11.69□□□□□ -0.54
CHTOP-202ENST00000368687 C6orf48Q9UBA6 75 aa11.69□□□□□ -0.54
CHTOP-202ENST00000368687 HERC1Q15751 4861 aa11.68□□□□□ -0.54
CHTOP-202ENST00000368687 HSBP1O75506 76 aa11.68□□□□□ -0.54
CHTOP-202ENST00000368687 IGLC3P0DOY3 106 aa11.68□□□□□ -0.54
CHTOP-202ENST00000368687 NDUFA6P56556 154 aa11.68□□□□□ -0.54
CHTOP-202ENST00000368687 PMCHL1Q16048 86 aa11.68□□□□□ -0.54
CHTOP-202ENST00000368687 SMIM1B2RUZ4 78 aa11.67□□□□□ -0.54
CHTOP-202ENST00000368687 C10orf25Q5T742 122 aa11.67□□□□□ -0.54
CHTOP-202ENST00000368687 DMBT1Q9UGM3 2413 aaPredicted RBP11.67□□□□□ -0.54
CHTOP-202ENST00000368687 COLCA2A8K830 154 aa11.66□□□□□ -0.54
CHTOP-202ENST00000368687 NDUFC2-KCTD14E9PQ53 114 aa11.66□□□□□ -0.54
CHTOP-202ENST00000368687 F8VRH5 84 aa11.66□□□□□ -0.54
CHTOP-202ENST00000368687 KRTAP10-4P60372 401 aaPredicted RBP11.66□□□□□ -0.54
CHTOP-202ENST00000368687 C2orf82Q6UX34 121 aa11.65□□□□□ -0.54
CHTOP-202ENST00000368687 COX7B2Q8TF08 81 aa11.64□□□□□ -0.55
CHTOP-202ENST00000368687 TRAV12-1A0A0B4J245 112 aa11.63□□□□□ -0.55
CHTOP-202ENST00000368687 Q6ZRP5 223 aa11.63□□□□□ -0.55
CHTOP-202ENST00000368687 IFI27L1Q96BM0 104 aa11.63□□□□□ -0.55
CHTOP-202ENST00000368687 C9orf116Q5BN46 136 aaPredicted RBP11.62□□□□□ -0.55
CHTOP-202ENST00000368687 SFTA2Q6UW10 78 aa11.61□□□□□ -0.55
CHTOP-202ENST00000368687 SPINK8P0C7L1 97 aa11.6□□□□□ -0.55
CHTOP-202ENST00000368687 GAGE2EQ4V326 116 aa11.6□□□□□ -0.55
CHTOP-202ENST00000368687 GAGE2DQ9UEU5 116 aa11.6□□□□□ -0.55
CHTOP-202ENST00000368687 CHTOPQ9Y3Y2 248 aaKnown RBP11.6□□□□□ -0.55
CHTOP-202ENST00000368687 SERF1AO75920 110 aa11.59□□□□□ -0.55
CHTOP-202ENST00000368687 ZNF22P17026 224 aaPredicted RBP11.59□□□□□ -0.55
CHTOP-202ENST00000368687 IGLV5-39A0A0G2JS06 123 aa11.58□□□□□ -0.56
CHTOP-202ENST00000368687 A0A1W2PNN7 141 aa11.58□□□□□ -0.56
CHTOP-202ENST00000368687 LEPROTL1O95214 131 aa11.58□□□□□ -0.56
CHTOP-202ENST00000368687 PRR3P79522 188 aaKnown RBP11.58□□□□□ -0.56
CHTOP-202ENST00000368687 HSPB8Q9UJY1 196 aa11.58□□□□□ -0.56
CHTOP-202ENST00000368687 TMEM170BQ5T4T1 132 aa11.57□□□□□ -0.56
CHTOP-202ENST00000368687 FAM19A2Q8N3H0 131 aa11.57□□□□□ -0.56
CHTOP-202ENST00000368687 C11orf86A6NJI1 115 aa11.56□□□□□ -0.56
CHTOP-202ENST00000368687 ODF1Q14990 250 aa11.56□□□□□ -0.56
CHTOP-202ENST00000368687 KRTAP29-1A8MX34 341 aaPredicted RBP11.54□□□□□ -0.56
CHTOP-202ENST00000368687 OXTP01178 125 aa11.54□□□□□ -0.56
CHTOP-202ENST00000368687 SCO1O75880 301 aa11.53□□□□□ -0.56
CHTOP-202ENST00000368687 J3QL48 77 aa11.52□□□□□ -0.57
CHTOP-202ENST00000368687 LINC00310P59036 64 aa11.52□□□□□ -0.57
CHTOP-202ENST00000368687 FAM19A5Q7Z5A7 132 aaPredicted RBP11.52□□□□□ -0.57
CHTOP-202ENST00000368687 M0QXV9 152 aa11.51□□□□□ -0.57
CHTOP-202ENST00000368687 COX17Q14061 63 aa11.51□□□□□ -0.57
CHTOP-202ENST00000368687 C9orf129Q5T035 196 aaKnown RBP11.51□□□□□ -0.57
CHTOP-202ENST00000368687 FAM168BA1KXE4 195 aa11.5□□□□□ -0.57
CHTOP-202ENST00000368687 PLNP26678 52 aa11.5□□□□□ -0.57
CHTOP-202ENST00000368687 TMEM223A0PJW6 202 aa11.49□□□□□ -0.57
CHTOP-202ENST00000368687 HIST1H2BKO60814 126 aa11.49□□□□□ -0.57
CHTOP-202ENST00000368687 HIST1H2BJP06899 126 aa11.49□□□□□ -0.57
CHTOP-202ENST00000368687 HIST1H2BOP23527 126 aa11.49□□□□□ -0.57
CHTOP-202ENST00000368687 HIST1H2BBP33778 126 aa11.49□□□□□ -0.57
CHTOP-202ENST00000368687 HNRNPA3P51991 378 aaKnown RBP11.49□□□□□ -0.57
CHTOP-202ENST00000368687 HIST1H2BDP58876 126 aa11.49□□□□□ -0.57
CHTOP-202ENST00000368687 HIST1H2BCP62807 126 aa11.49□□□□□ -0.57
CHTOP-202ENST00000368687 HIST2H2BEQ16778 126 aa11.49□□□□□ -0.57
CHTOP-202ENST00000368687 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.49□□□□□ -0.57
CHTOP-202ENST00000368687 PHF5AQ7RTV0 110 aaKnown RBP11.49□□□□□ -0.57
CHTOP-202ENST00000368687 HIST1H2BHQ93079 126 aa11.49□□□□□ -0.57
CHTOP-202ENST00000368687 HIST1H2BNQ99877 126 aa11.49□□□□□ -0.57
CHTOP-202ENST00000368687 HIST1H2BMQ99879 126 aa11.49□□□□□ -0.57
CHTOP-202ENST00000368687 S100A1P23297 94 aa11.48□□□□□ -0.57
CHTOP-202ENST00000368687 LRP1Q07954 4544 aaKnown RBP11.48□□□□□ -0.57
CHTOP-202ENST00000368687 H0Y8G0 127 aa11.47□□□□□ -0.57
CHTOP-202ENST00000368687 LBHQ53QV2 105 aaPredicted RBP11.47□□□□□ -0.57
CHTOP-202ENST00000368687 SPINK6Q6UWN8 80 aa11.47□□□□□ -0.57
CHTOP-202ENST00000368687 MAP1LC3CQ9BXW4 147 aa11.47□□□□□ -0.57
CHTOP-202ENST00000368687 XAGE1AQ9HD64 81 aa11.47□□□□□ -0.57
CHTOP-202ENST00000368687 TP73-AS1Q9UF72 201 aa11.47□□□□□ -0.57
CHTOP-202ENST00000368687 PSORS1C2Q9UIG4 136 aa11.47□□□□□ -0.57
CHTOP-202ENST00000368687 FABP4P15090 132 aa11.46□□□□□ -0.57
CHTOP-202ENST00000368687 UBE2BP63146 152 aa11.46□□□□□ -0.57
CHTOP-202ENST00000368687 ERG28Q9UKR5 140 aa11.46□□□□□ -0.57
CHTOP-202ENST00000368687 PLA2G2DQ9UNK4 145 aa11.46□□□□□ -0.57
CHTOP-202ENST00000368687 PKHD1L1Q86WI1 4243 aa11.46□□□□□ -0.58
CHTOP-202ENST00000368687 NUPR1O60356 82 aa11.45□□□□□ -0.58
CHTOP-202ENST00000368687 ZNF625Q96I27 306 aaPredicted RBP11.45□□□□□ -0.58
CHTOP-202ENST00000368687 LINC00587B1AMM8 73 aa11.43□□□□□ -0.58
CHTOP-202ENST00000368687 DPM2O94777 84 aa11.43□□□□□ -0.58
CHTOP-202ENST00000368687 PFN2P35080 140 aa11.43□□□□□ -0.58
CHTOP-202ENST00000368687 HERVK_113P61574 105 aa11.43□□□□□ -0.58
CHTOP-202ENST00000368687 C1orf137Q5JT78 98 aa11.43□□□□□ -0.58
CHTOP-202ENST00000368687 KRTAP7-1Q8IUC3 87 aa11.43□□□□□ -0.58
CHTOP-202ENST00000368687 HERV-K104P63124 156 aa11.42□□□□□ -0.58
CHTOP-202ENST00000368687 REG3GQ6UW15 175 aa11.42□□□□□ -0.58
CHTOP-202ENST00000368687 C22orf24Q9Y442 160 aa11.42□□□□□ -0.58
CHTOP-202ENST00000368687 SERTAD4-AS1Q5TG53 156 aa11.41□□□□□ -0.58
CHTOP-202ENST00000368687 MRPL55Q7Z7F7 128 aaKnown RBP11.41□□□□□ -0.58
CHTOP-202ENST00000368687 FAT3Q8TDW7 4589 aa11.41□□□□□ -0.58
CHTOP-202ENST00000368687 IGKCP01834 107 aa11.4□□□□□ -0.58
CHTOP-202ENST00000368687 SRSF9Q13242 221 aaKnown RBP eCLIP11.4□□□□□ -0.581e-7■□□□□ 8.6
CHTOP-202ENST00000368687 COA6Q5JTJ3 125 aaKnown RBP11.4□□□□□ -0.58
CHTOP-202ENST00000368687 NKAPP1Q8N9T2 125 aa11.4□□□□□ -0.58
CHTOP-202ENST00000368687 PLEKHB2Q96CS7 222 aa11.4□□□□□ -0.58
CHTOP-202ENST00000368687 IGLV5-37A0A075B6J1 123 aa11.39□□□□□ -0.59
CHTOP-202ENST00000368687 MYMXA0A1B0GTQ4 84 aa11.38□□□□□ -0.59
CHTOP-202ENST00000368687 IGLV7-43P04211 117 aa11.38□□□□□ -0.59
CHTOP-202ENST00000368687 RPL24P83731 157 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms