RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 TMEM170BQ5T4T1 132 aa6.12□□□□□ -1.43
CNIH4-202ENST00000366857 TENM2Q9NT68 2774 aa6.12□□□□□ -1.43
CNIH4-202ENST00000366857 NDUFA12Q9UI09 145 aa6.12□□□□□ -1.43
CNIH4-202ENST00000366857 LINC00269Q8N2A0 174 aa6.11□□□□□ -1.43
CNIH4-202ENST00000366857 LINC00167Q96N53 147 aa6.11□□□□□ -1.43
CNIH4-202ENST00000366857 TRBV30A0A0K0K1B3 111 aa6.11□□□□□ -1.43
CNIH4-202ENST00000366857 HERV-K104P63124 156 aa6.11□□□□□ -1.43
CNIH4-202ENST00000366857 REG3AQ06141 175 aa6.11□□□□□ -1.43
CNIH4-202ENST00000366857 COX7B2Q8TF08 81 aa6.11□□□□□ -1.43
CNIH4-202ENST00000366857 IFITM1P13164 125 aa6.11□□□□□ -1.43
CNIH4-202ENST00000366857 A4D1N5 150 aa6.1□□□□□ -1.43
CNIH4-202ENST00000366857 COX17Q14061 63 aa6.1□□□□□ -1.43
CNIH4-202ENST00000366857 IBA57-AS1B1ANH7 110 aa6.1□□□□□ -1.43
CNIH4-202ENST00000366857 HERVK_113P61574 105 aa6.09□□□□□ -1.43
CNIH4-202ENST00000366857 C10orf25Q5T742 122 aa6.09□□□□□ -1.43
CNIH4-202ENST00000366857 CHCHD10Q8WYQ3 142 aaPredicted RBP6.09□□□□□ -1.43
CNIH4-202ENST00000366857 PRB2P02812 416 aaPredicted RBP6.09□□□□□ -1.43
CNIH4-202ENST00000366857 SMAGPQ0VAQ4 97 aa6.09□□□□□ -1.43
CNIH4-202ENST00000366857 TLX1NBP0CAT3 122 aa6.08□□□□□ -1.44
CNIH4-202ENST00000366857 C11orf45Q8TAV5 145 aa6.08□□□□□ -1.44
CNIH4-202ENST00000366857 SMIM13P0DJ93 91 aa6.08□□□□□ -1.44
CNIH4-202ENST00000366857 TRAV8-4A0A0B4J246 113 aa6.08□□□□□ -1.44
CNIH4-202ENST00000366857 LINC00337Q8N6G1 96 aa6.08□□□□□ -1.44
CNIH4-202ENST00000366857 Q9H8V8 135 aa6.08□□□□□ -1.44
CNIH4-202ENST00000366857 A6NDN8 102 aa6.08□□□□□ -1.44
CNIH4-202ENST00000366857 SFTA2Q6UW10 78 aa6.08□□□□□ -1.44
CNIH4-202ENST00000366857 SDIM1Q6ZPB5 146 aa6.08□□□□□ -1.44
CNIH4-202ENST00000366857 TRAV10A0A0B4J240 114 aa6.07□□□□□ -1.44
CNIH4-202ENST00000366857 TRAV13-1A0A0B4J241 112 aa6.07□□□□□ -1.44
CNIH4-202ENST00000366857 F8WDY8 70 aa6.07□□□□□ -1.44
CNIH4-202ENST00000366857 NDUFC2O95298 119 aa6.07□□□□□ -1.44
CNIH4-202ENST00000366857 DEFB121Q5J5C9 76 aa6.07□□□□□ -1.44
CNIH4-202ENST00000366857 C15orf53Q8NAA6 179 aa6.07□□□□□ -1.44
CNIH4-202ENST00000366857 OBSCN-AS1Q96MR7 158 aa6.07□□□□□ -1.44
CNIH4-202ENST00000366857 DEFB131BA0A096LNP1 70 aa6.07□□□□□ -1.44
CNIH4-202ENST00000366857 TMEM238C9JI98 176 aa6.07□□□□□ -1.44
CNIH4-202ENST00000366857 MUC7Q8TAX7 377 aa6.07□□□□□ -1.44
CNIH4-202ENST00000366857 LGALS3P17931 250 aaKnown RBP6.06□□□□□ -1.44
CNIH4-202ENST00000366857 SS18Q15532 418 aa6.06□□□□□ -1.44
CNIH4-202ENST00000366857 C6orf48Q9UBA6 75 aa6.06□□□□□ -1.44
CNIH4-202ENST00000366857 KRTAP4-16G5E9R7 235 aaPredicted RBP6.05□□□□□ -1.44
CNIH4-202ENST00000366857 CCL18P55774 89 aa6.05□□□□□ -1.44
CNIH4-202ENST00000366857 RNF151Q2KHN1 245 aa6.05□□□□□ -1.44
CNIH4-202ENST00000366857 CASC10Q5T4H9 136 aa6.05□□□□□ -1.44
CNIH4-202ENST00000366857 NHP2Q9NX24 153 aaKnown RBP6.05□□□□□ -1.44
CNIH4-202ENST00000366857 NOTCH1P46531 2555 aa6.05□□□□□ -1.44
CNIH4-202ENST00000366857 LRCOL1A6NCL2 159 aa6.05□□□□□ -1.44
CNIH4-202ENST00000366857 HIST1H4GQ99525 98 aa6.05□□□□□ -1.44
CNIH4-202ENST00000366857 TRIAP1O43715 76 aa6.05□□□□□ -1.44
CNIH4-202ENST00000366857 TCL1BO95988 128 aa6.05□□□□□ -1.44
CNIH4-202ENST00000366857 GCSHP23434 173 aa6.05□□□□□ -1.44
CNIH4-202ENST00000366857 RPL28P46779 137 aaKnown RBP6.05□□□□□ -1.44
CNIH4-202ENST00000366857 PRO1854Q9UHT4 67 aa6.05□□□□□ -1.44
CNIH4-202ENST00000366857 IGLV6-57P01721 117 aa6.04□□□□□ -1.44
CNIH4-202ENST00000366857 C6orf223Q8N319 242 aa6.04□□□□□ -1.44
CNIH4-202ENST00000366857 PLA2G2DQ9UNK4 145 aa6.04□□□□□ -1.44
CNIH4-202ENST00000366857 IGLV5-37A0A075B6J1 123 aa6.04□□□□□ -1.44
CNIH4-202ENST00000366857 UBE2L6O14933 153 aa6.04□□□□□ -1.44
CNIH4-202ENST00000366857 H3BUT2 72 aa6.03□□□□□ -1.44
CNIH4-202ENST00000366857 C2orf48Q96LS8 159 aa6.03□□□□□ -1.44
CNIH4-202ENST00000366857 FAM218AQ96MZ4 157 aa6.03□□□□□ -1.44
CNIH4-202ENST00000366857 CHCHD5Q9BSY4 110 aa6.03□□□□□ -1.44
CNIH4-202ENST00000366857 Q6ZR54 194 aa6.03□□□□□ -1.44
CNIH4-202ENST00000366857 DAND5Q8N907 189 aa6.03□□□□□ -1.44
CNIH4-202ENST00000366857 ERG28Q9UKR5 140 aa6.03□□□□□ -1.44
CNIH4-202ENST00000366857 STAB2Q8WWQ8 2551 aa6.03□□□□□ -1.44
CNIH4-202ENST00000366857 NHLRC4P0CG21 123 aaPredicted RBP6.02□□□□□ -1.45
CNIH4-202ENST00000366857 C2orf82Q6UX34 121 aa6.02□□□□□ -1.45
CNIH4-202ENST00000366857 GEMIN7Q9H840 131 aaKnown RBP6.02□□□□□ -1.45
CNIH4-202ENST00000366857 CXCL5P42830 114 aa6.02□□□□□ -1.45
CNIH4-202ENST00000366857 PRSS2P07478 247 aa6.02□□□□□ -1.45
CNIH4-202ENST00000366857 RPL24P83731 157 aaKnown RBP6.01□□□□□ -1.45
CNIH4-202ENST00000366857 CARD19Q96LW7 228 aa6.01□□□□□ -1.45
CNIH4-202ENST00000366857 C9orf129Q5T035 196 aaKnown RBP6.01□□□□□ -1.45
CNIH4-202ENST00000366857 GAGE12HA6NDE8 117 aa6.01□□□□□ -1.45
CNIH4-202ENST00000366857 PGPEP1Q9NXJ5 209 aa6.01□□□□□ -1.45
CNIH4-202ENST00000366857 COX7A2LO14548 114 aa6□□□□□ -1.45
CNIH4-202ENST00000366857 WFDC2Q14508 124 aa6□□□□□ -1.45
CNIH4-202ENST00000366857 BATFQ16520 125 aa6□□□□□ -1.45
CNIH4-202ENST00000366857 C5orf38Q86SI9 138 aa6□□□□□ -1.45
CNIH4-202ENST00000366857 NAA38Q9BRA0 125 aaKnown RBP6□□□□□ -1.45
CNIH4-202ENST00000366857 TRAV16A0A0A6YYK6 109 aaPredicted RBP6□□□□□ -1.45
CNIH4-202ENST00000366857 LST1O00453 97 aa6□□□□□ -1.45
CNIH4-202ENST00000366857 SND1-IT1Q9HBX3 110 aa6□□□□□ -1.45
CNIH4-202ENST00000366857 XCL1P47992 114 aa6□□□□□ -1.45
CNIH4-202ENST00000366857 F8W1H4 67 aa5.99□□□□□ -1.45
CNIH4-202ENST00000366857 CNBPP62633 177 aaKnown RBP5.99□□□□□ -1.45
CNIH4-202ENST00000366857 VPREB1P12018 145 aa5.99□□□□□ -1.45
CNIH4-202ENST00000366857 HSPG2P98160 4391 aa5.99□□□□□ -1.45
CNIH4-202ENST00000366857 UNQ6190/PRO20217Q6UXQ8 127 aa5.99□□□□□ -1.45
CNIH4-202ENST00000366857 MIR7-3HGQ8N6C7 128 aa5.99□□□□□ -1.45
CNIH4-202ENST00000366857 C9orf116Q5BN46 136 aaPredicted RBP5.99□□□□□ -1.45
CNIH4-202ENST00000366857 ANGP03950 147 aaKnown RBP5.98□□□□□ -1.45
CNIH4-202ENST00000366857 SPRR1AP35321 89 aa5.98□□□□□ -1.45
CNIH4-202ENST00000366857 Q6ZRP5 223 aa5.98□□□□□ -1.45
CNIH4-202ENST00000366857 KLK12Q9UKR0 248 aa5.98□□□□□ -1.45
CNIH4-202ENST00000366857 RPL13AP40429 203 aaKnown RBP5.98□□□□□ -1.45
CNIH4-202ENST00000366857 TNXBP22105 4242 aa5.98□□□□□ -1.45
CNIH4-202ENST00000366857 TMEM238LA0A1B0GVL6 79 aa5.97□□□□□ -1.45
CNIH4-202ENST00000366857 A6NJY4 79 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms