RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 TET1Q8NFU7 2136 aa1.09□□□□□ -2.23
RNU4-42P-201ENST00000364738 IGKV1D-42A0A075B6H8 117 aa1.09□□□□□ -2.23
RNU4-42P-201ENST00000364738 IGLV2-18A0A075B6J9 118 aa1.09□□□□□ -2.23
RNU4-42P-201ENST00000364738 IGHV3OR16-8A0A075B7F1 116 aa1.09□□□□□ -2.23
RNU4-42P-201ENST00000364738 TRAV21A0A0B4J279 112 aa1.09□□□□□ -2.23
RNU4-42P-201ENST00000364738 IGHV3-64DA0A0J9YX35 117 aa1.09□□□□□ -2.23
RNU4-42P-201ENST00000364738 A0A1B0GVX0 72 aa1.09□□□□□ -2.23
RNU4-42P-201ENST00000364738 TFF1P04155 84 aa1.09□□□□□ -2.23
RNU4-42P-201ENST00000364738 DEFB114Q30KQ6 69 aa1.09□□□□□ -2.23
RNU4-42P-201ENST00000364738 LINC00483Q53H64 154 aa1.09□□□□□ -2.23
RNU4-42P-201ENST00000364738 C1orf137Q5JT78 98 aa1.09□□□□□ -2.23
RNU4-42P-201ENST00000364738 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.09□□□□□ -2.23
RNU4-42P-201ENST00000364738 WFDC9Q8NEX5 89 aa1.09□□□□□ -2.23
RNU4-42P-201ENST00000364738 LINC00208Q96KT6 92 aa1.09□□□□□ -2.23
RNU4-42P-201ENST00000364738 HIGD2AQ9BW72 106 aa1.09□□□□□ -2.23
RNU4-42P-201ENST00000364738 CNFNQ9BYD5 112 aa1.09□□□□□ -2.23
RNU4-42P-201ENST00000364738 TNRC6BQ9UPQ9 1833 aaKnown RBP1.09□□□□□ -2.23
RNU4-42P-201ENST00000364738 FBN1P35555 2871 aaKnown RBP1.09□□□□□ -2.24
RNU4-42P-201ENST00000364738 SPTBP11277 2137 aa1.09□□□□□ -2.24
RNU4-42P-201ENST00000364738 MYO7BQ6PIF6 2116 aa1.09□□□□□ -2.24
RNU4-42P-201ENST00000364738 MUC4Q99102 2169 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 TET2Q6N021 2002 aaPredicted RBP1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 IGHV3-64A0A075B6Q5 118 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 IGHV1-18A0A0C4DH31 117 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 A0A1W2PNM2 257 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 C17orf98A8MV24 154 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 CTSGP08311 255 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 MGPP08493 103 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 DEFA4P12838 97 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 ERHP84090 104 aaKnown RBP1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 CSAG1Q6PB30 78 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 MIR7-3HGQ8N6C7 128 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 TMEM105Q8N8V8 129 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 Q8NAQ8 132 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 FDCSPQ8NFU4 85 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 COX7B2Q8TF08 81 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 ZCCHC13Q8WW36 166 aaKnown RBP1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 DMAC1Q96GE9 116 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 C20orf166-AS1Q96NR2 134 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 WFDC10AQ9H1F0 79 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 PLAC8Q9NZF1 115 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 ZNRD1Q9P1U0 126 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 KLK9Q9UKQ9 250 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 SSC5DA1L4H1 1573 aa1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 MDC1Q14676 2089 aaKnown RBP1.08□□□□□ -2.24
RNU4-42P-201ENST00000364738 ARFGEF3Q5TH69 2177 aa1.07□□□□□ -2.24
RNU4-42P-201ENST00000364738 IGKV1D-37A0A075B6S9 117 aa1.07□□□□□ -2.24
RNU4-42P-201ENST00000364738 IGKV1OR2-108A0A075B7D4 117 aa1.07□□□□□ -2.24
RNU4-42P-201ENST00000364738 LOC110117498A0A087WWA1 95 aa1.07□□□□□ -2.24
RNU4-42P-201ENST00000364738 CLPSL1A2RUU4 121 aa1.07□□□□□ -2.24
RNU4-42P-201ENST00000364738 ODF3BA8MYP8 253 aa1.07□□□□□ -2.24
RNU4-42P-201ENST00000364738 H0Y9P7 68 aa1.07□□□□□ -2.24
RNU4-42P-201ENST00000364738 UQCR11O14957 56 aa1.07□□□□□ -2.24
RNU4-42P-201ENST00000364738 HAMPP81172 84 aa1.07□□□□□ -2.24
RNU4-42P-201ENST00000364738 LINC00322Q6ZN03 302 aaPredicted RBP1.07□□□□□ -2.24
RNU4-42P-201ENST00000364738 NTM-AS1Q6ZSK4 140 aa1.07□□□□□ -2.24
RNU4-42P-201ENST00000364738 Q8TAT8 98 aa1.07□□□□□ -2.24
RNU4-42P-201ENST00000364738 CIRBP-AS1Q8TBR5 109 aa1.07□□□□□ -2.24
RNU4-42P-201ENST00000364738 ZNF625Q96I27 306 aaPredicted RBP1.07□□□□□ -2.24
RNU4-42P-201ENST00000364738 GAFA1Q96PS6 74 aa1.07□□□□□ -2.24
RNU4-42P-201ENST00000364738 SMIM2Q9BVW6 85 aa1.07□□□□□ -2.24
RNU4-42P-201ENST00000364738 PI4KAP42356 2102 aa1.07□□□□□ -2.24
RNU4-42P-201ENST00000364738 MED13Q9UHV7 2174 aa1.07□□□□□ -2.24
RNU4-42P-201ENST00000364738 CEP192Q8TEP8 1941 aa1.07□□□□□ -2.24
RNU4-42P-201ENST00000364738 ZGRF1Q86YA3 2104 aa1.06□□□□□ -2.24
RNU4-42P-201ENST00000364738 INTS1Q8N201 2190 aaKnown RBP1.06□□□□□ -2.24
RNU4-42P-201ENST00000364738 ZNF407Q9C0G0 2248 aa1.06□□□□□ -2.24
RNU4-42P-201ENST00000364738 IGKV3D-11A0A0A0MRZ8 115 aa1.06□□□□□ -2.24
RNU4-42P-201ENST00000364738 ETDCA0A1B0GVM5 59 aa1.06□□□□□ -2.24
RNU4-42P-201ENST00000364738 NUPR2A6NF83 97 aa1.06□□□□□ -2.24
RNU4-42P-201ENST00000364738 A8MUU9 505 aa1.06□□□□□ -2.24
RNU4-42P-201ENST00000364738 NDUFA4O00483 81 aa1.06□□□□□ -2.24
RNU4-42P-201ENST00000364738 IGHV3-53P01767 116 aa1.06□□□□□ -2.24
RNU4-42P-201ENST00000364738 TLX1NBP0CAT3 122 aa1.06□□□□□ -2.24
RNU4-42P-201ENST00000364738 DEFB113Q30KQ7 82 aa1.06□□□□□ -2.24
RNU4-42P-201ENST00000364738 KRTAP25-1Q3LHN0 102 aa1.06□□□□□ -2.24
RNU4-42P-201ENST00000364738 HCP5Q6MZN7 132 aa1.06□□□□□ -2.24
RNU4-42P-201ENST00000364738 KRTAP26-1Q6PEX3 210 aa1.06□□□□□ -2.24
RNU4-42P-201ENST00000364738 C15orf56Q8N910 161 aa1.06□□□□□ -2.24
RNU4-42P-201ENST00000364738 C4orf3Q8WVX3 66 aa1.06□□□□□ -2.24
RNU4-42P-201ENST00000364738 TTTY12Q9BZ98 90 aa1.06□□□□□ -2.24
RNU4-42P-201ENST00000364738 ARHGAP32A7KAX9 2087 aa1.06□□□□□ -2.24
RNU4-42P-201ENST00000364738 GOLGA4Q13439 2230 aaKnown RBP1.05□□□□□ -2.24
RNU4-42P-201ENST00000364738 HEATR5BQ9P2D3 2071 aa1.05□□□□□ -2.24
RNU4-42P-201ENST00000364738 TRGV2A0A075B6R0 118 aa1.05□□□□□ -2.24
RNU4-42P-201ENST00000364738 TRGV4A0A0C4DH28 118 aa1.05□□□□□ -2.24
RNU4-42P-201ENST00000364738 H3BSH0 61 aa1.05□□□□□ -2.24
RNU4-42P-201ENST00000364738 NCR3O14931 201 aa1.05□□□□□ -2.24
RNU4-42P-201ENST00000364738 NDUFA1O15239 70 aa1.05□□□□□ -2.24
RNU4-42P-201ENST00000364738 IGLV3-1P01715 115 aa1.05□□□□□ -2.24
RNU4-42P-201ENST00000364738 IGLV7-43P04211 117 aa1.05□□□□□ -2.24
RNU4-42P-201ENST00000364738 P0C880 135 aa1.05□□□□□ -2.24
RNU4-42P-201ENST00000364738 CCL3L1P16619 93 aa1.05□□□□□ -2.24
RNU4-42P-201ENST00000364738 CCL18P55774 89 aa1.05□□□□□ -2.24
RNU4-42P-201ENST00000364738 DEFB112Q30KQ8 113 aa1.05□□□□□ -2.24
RNU4-42P-201ENST00000364738 KRTAP13-2Q52LG2 175 aa1.05□□□□□ -2.24
RNU4-42P-201ENST00000364738 SPATA8Q6RVD6 105 aa1.05□□□□□ -2.24
RNU4-42P-201ENST00000364738 DEFB106AQ8N104 65 aa1.05□□□□□ -2.24
RNU4-42P-201ENST00000364738 LINC00308Q8TCZ7 52 aa1.05□□□□□ -2.24
RNU4-42P-201ENST00000364738 KCNQ1DNQ9H478 68 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms