RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 C10orf25Q5T742 122 aa9.09□□□□□ -0.95
GDPD3-201ENST00000360688 CBLN2Q8IUK8 224 aa9.09□□□□□ -0.95
GDPD3-201ENST00000360688 TLX1NBP0CAT3 122 aa9.08□□□□□ -0.96
GDPD3-201ENST00000360688 UNQ6190/PRO20217Q6UXQ8 127 aa9.08□□□□□ -0.96
GDPD3-201ENST00000360688 ERASQ7Z444 233 aa9.08□□□□□ -0.96
GDPD3-201ENST00000360688 C18orf32Q8TCD1 76 aa9.08□□□□□ -0.96
GDPD3-201ENST00000360688 SCGB3A1Q96QR1 104 aa9.08□□□□□ -0.96
GDPD3-201ENST00000360688 AMELXQ99217 191 aa9.08□□□□□ -0.96
GDPD3-201ENST00000360688 UBE2D1P51668 147 aa9.07□□□□□ -0.96
GDPD3-201ENST00000360688 RAB5BP61020 215 aa9.07□□□□□ -0.96
GDPD3-201ENST00000360688 LINC00173Q6ZV60 143 aa9.07□□□□□ -0.96
GDPD3-201ENST00000360688 FAM19A5Q7Z5A7 132 aaPredicted RBP9.07□□□□□ -0.96
GDPD3-201ENST00000360688 C6orf48Q9UBA6 75 aa9.07□□□□□ -0.96
GDPD3-201ENST00000360688 IGLV1-50A0A075B6I6 118 aa9.06□□□□□ -0.96
GDPD3-201ENST00000360688 KRTAP1-4P0C5Y4 121 aa9.06□□□□□ -0.96
GDPD3-201ENST00000360688 LINC00242Q5T6M2 205 aa9.06□□□□□ -0.96
GDPD3-201ENST00000360688 KRTAP7-1Q8IUC3 87 aa9.06□□□□□ -0.96
GDPD3-201ENST00000360688 LINC00614P0C842 121 aa9.05□□□□□ -0.96
GDPD3-201ENST00000360688 SEC11AP67812 179 aa9.05□□□□□ -0.96
GDPD3-201ENST00000360688 GAGE2EQ4V326 116 aa9.05□□□□□ -0.96
GDPD3-201ENST00000360688 ZC2HC1BQ5TFG8 222 aa9.05□□□□□ -0.96
GDPD3-201ENST00000360688 GAGE2DQ9UEU5 116 aa9.05□□□□□ -0.96
GDPD3-201ENST00000360688 FAM19A3Q7Z5A8 133 aa9.05□□□□□ -0.96
GDPD3-201ENST00000360688 HERVK_113P63121 156 aa9.04□□□□□ -0.96
GDPD3-201ENST00000360688 KIAA0087Q14695 138 aa9.04□□□□□ -0.96
GDPD3-201ENST00000360688 LINC01561Q8N1V8 128 aa9.04□□□□□ -0.96
GDPD3-201ENST00000360688 M0QXV9 152 aa9.03□□□□□ -0.96
GDPD3-201ENST00000360688 HBDP02042 147 aa9.03□□□□□ -0.96
GDPD3-201ENST00000360688 URB1-AS1Q96HZ7 61 aa9.03□□□□□ -0.96
GDPD3-201ENST00000360688 UBE2BP63146 152 aa9.02□□□□□ -0.97
GDPD3-201ENST00000360688 GEMIN7Q9H840 131 aaKnown RBP9.02□□□□□ -0.97
GDPD3-201ENST00000360688 C2orf82Q6UX34 121 aa9.01□□□□□ -0.97
GDPD3-201ENST00000360688 A0A096LNJ9 63 aa9□□□□□ -0.97
GDPD3-201ENST00000360688 TRBV30A0A0K0K1B3 111 aa9□□□□□ -0.97
GDPD3-201ENST00000360688 NDUFC2-KCTD14E9PQ53 114 aa9□□□□□ -0.97
GDPD3-201ENST00000360688 PMVKQ15126 192 aa9□□□□□ -0.97
GDPD3-201ENST00000360688 PRR4Q16378 134 aa9□□□□□ -0.97
GDPD3-201ENST00000360688 C9orf129Q5T035 196 aaKnown RBP9□□□□□ -0.97
GDPD3-201ENST00000360688 CHCHD1Q96BP2 118 aaKnown RBP9□□□□□ -0.97
GDPD3-201ENST00000360688 TRGC2P03986 189 aa8.99□□□□□ -0.97
GDPD3-201ENST00000360688 RPL13AP40429 203 aaKnown RBP8.99□□□□□ -0.97
GDPD3-201ENST00000360688 PACRGQ96M98 296 aaPredicted RBP8.99□□□□□ -0.97
GDPD3-201ENST00000360688 CST9LQ9H4G1 147 aa8.99□□□□□ -0.97
GDPD3-201ENST00000360688 TINCRA0A1B0GVN0 87 aa8.98□□□□□ -0.97
GDPD3-201ENST00000360688 ATP5LO75964 103 aa8.98□□□□□ -0.97
GDPD3-201ENST00000360688 PMCHL1Q16048 86 aa8.98□□□□□ -0.97
GDPD3-201ENST00000360688 LINC00469Q8N7U9 141 aa8.98□□□□□ -0.97
GDPD3-201ENST00000360688 PRSS2P07478 247 aa8.97□□□□□ -0.97
GDPD3-201ENST00000360688 PDZD11Q5EBL8 140 aa8.97□□□□□ -0.97
GDPD3-201ENST00000360688 BAGE3Q86Y29 109 aa8.97□□□□□ -0.97
GDPD3-201ENST00000360688 CDKN2A-AS1Q9UH64 79 aa8.97□□□□□ -0.97
GDPD3-201ENST00000360688 COLCA2A8K830 154 aa8.96□□□□□ -0.98
GDPD3-201ENST00000360688 NDUFA6P56556 154 aa8.96□□□□□ -0.98
GDPD3-201ENST00000360688 IGLV5-45A0A087WSX0 123 aa8.95□□□□□ -0.98
GDPD3-201ENST00000360688 ZNF861PO60384 105 aa8.95□□□□□ -0.98
GDPD3-201ENST00000360688 HSBP1O75506 76 aa8.95□□□□□ -0.98
GDPD3-201ENST00000360688 Q8IZM0 81 aa8.95□□□□□ -0.98
GDPD3-201ENST00000360688 TOMM7Q9P0U1 55 aa8.95□□□□□ -0.98
GDPD3-201ENST00000360688 H3BRM9 83 aa8.94□□□□□ -0.98
GDPD3-201ENST00000360688 CKS1BP61024 79 aa8.94□□□□□ -0.98
GDPD3-201ENST00000360688 C6orf226Q5I0X4 101 aa8.94□□□□□ -0.98
GDPD3-201ENST00000360688 SMIM1B2RUZ4 78 aa8.92□□□□□ -0.98
GDPD3-201ENST00000360688 SCO1O75880 301 aa8.92□□□□□ -0.98
GDPD3-201ENST00000360688 IGLC3P0DOY3 106 aa8.92□□□□□ -0.98
GDPD3-201ENST00000360688 CXCL5P42830 114 aa8.92□□□□□ -0.98
GDPD3-201ENST00000360688 C22orf24Q9Y442 160 aa8.92□□□□□ -0.98
GDPD3-201ENST00000360688 NUPR1O60356 82 aa8.91□□□□□ -0.98
GDPD3-201ENST00000360688 TSPAN13O95857 204 aa8.9□□□□□ -0.98
GDPD3-201ENST00000360688 COX7B2Q8TF08 81 aa8.9□□□□□ -0.98
GDPD3-201ENST00000360688 IFI27L1Q96BM0 104 aa8.9□□□□□ -0.98
GDPD3-201ENST00000360688 XAGE1AQ9HD64 81 aa8.9□□□□□ -0.98
GDPD3-201ENST00000360688 TRAV12-1A0A0B4J245 112 aa8.89□□□□□ -0.99
GDPD3-201ENST00000360688 SERF1AO75920 110 aa8.89□□□□□ -0.99
GDPD3-201ENST00000360688 SPINK8P0C7L1 97 aa8.89□□□□□ -0.99
GDPD3-201ENST00000360688 FAM19A2Q8N3H0 131 aa8.89□□□□□ -0.99
GDPD3-201ENST00000360688 A0A087X002 238 aa8.88□□□□□ -0.99
GDPD3-201ENST00000360688 A0A0U1RQV1 116 aa8.88□□□□□ -0.99
GDPD3-201ENST00000360688 F8VRH5 84 aa8.88□□□□□ -0.99
GDPD3-201ENST00000360688 LBHQ53QV2 105 aaPredicted RBP8.88□□□□□ -0.99
GDPD3-201ENST00000360688 CHTOPQ9Y3Y2 248 aaKnown RBP8.88□□□□□ -0.99
GDPD3-201ENST00000360688 LEPROTL1O95214 131 aa8.87□□□□□ -0.99
GDPD3-201ENST00000360688 ZNF22P17026 224 aaPredicted RBP8.87□□□□□ -0.99
GDPD3-201ENST00000360688 FAT4Q6V0I7 4981 aa8.87□□□□□ -0.99
GDPD3-201ENST00000360688 C11orf86A6NJI1 115 aa8.86□□□□□ -0.99
GDPD3-201ENST00000360688 LINC00310P59036 64 aa8.86□□□□□ -0.99
GDPD3-201ENST00000360688 TP73-AS1Q9UF72 201 aa8.86□□□□□ -0.99
GDPD3-201ENST00000360688 RPL28P46779 137 aaKnown RBP8.85□□□□□ -0.99
GDPD3-201ENST00000360688 TMEM170BQ5T4T1 132 aa8.85□□□□□ -0.99
GDPD3-201ENST00000360688 MRPL55Q7Z7F7 128 aaKnown RBP8.85□□□□□ -0.99
GDPD3-201ENST00000360688 HSPB8Q9UJY1 196 aa8.85□□□□□ -0.99
GDPD3-201ENST00000360688 IGLV5-39A0A0G2JS06 123 aa8.84□□□□□ -0.99
GDPD3-201ENST00000360688 BCE1O60756 84 aa8.84□□□□□ -0.99
GDPD3-201ENST00000360688 CRYGAP11844 174 aa8.84□□□□□ -0.99
GDPD3-201ENST00000360688 KRTAP9-2Q9BYQ4 174 aa8.84□□□□□ -0.99
GDPD3-201ENST00000360688 HIST1H2BKO60814 126 aa8.83□□□□□ -1
GDPD3-201ENST00000360688 HIST1H2BJP06899 126 aa8.83□□□□□ -1
GDPD3-201ENST00000360688 S100A1P23297 94 aa8.83□□□□□ -1
GDPD3-201ENST00000360688 HIST1H2BOP23527 126 aa8.83□□□□□ -1
GDPD3-201ENST00000360688 HIST1H2BBP33778 126 aa8.83□□□□□ -1
GDPD3-201ENST00000360688 HIST1H2BDP58876 126 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms