RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 GAGE12GP0CL81 117 aa14.2□□□□□ -0.14
CBWD3-201ENST00000360171 GAGE12IP0CL82 117 aa14.2□□□□□ -0.14
CBWD3-201ENST00000360171 TRAV13-2A0A0B4J235 113 aa14.19□□□□□ -0.14
CBWD3-201ENST00000360171 SMIM9A6NGZ8 99 aa14.19□□□□□ -0.14
CBWD3-201ENST00000360171 NOTCH1P46531 2555 aa14.18□□□□□ -0.14
CBWD3-201ENST00000360171 RPL28P46779 137 aaKnown RBP14.17□□□□□ -0.14
CBWD3-201ENST00000360171 COX7B2Q8TF08 81 aa14.16□□□□□ -0.14
CBWD3-201ENST00000360171 IMUPQ9GZP8 106 aa14.16□□□□□ -0.14
CBWD3-201ENST00000360171 NBEAL1Q6ZS30 2694 aa14.15□□□□□ -0.14
CBWD3-201ENST00000360171 TRGV2A0A075B6R0 118 aa14.15□□□□□ -0.14
CBWD3-201ENST00000360171 IGHV4-28A0A0C4DH34 117 aa14.14□□□□□ -0.15
CBWD3-201ENST00000360171 DEFB4AO15263 64 aa14.14□□□□□ -0.15
CBWD3-201ENST00000360171 CRPP02741 224 aa14.13□□□□□ -0.15
CBWD3-201ENST00000360171 BAALC-AS2P0C853 105 aa14.13□□□□□ -0.15
CBWD3-201ENST00000360171 LINC00612Q8N6U2 182 aa14.13□□□□□ -0.15
CBWD3-201ENST00000360171 Q8NAQ8 132 aa14.13□□□□□ -0.15
CBWD3-201ENST00000360171 SDIM1Q6ZPB5 146 aa14.13□□□□□ -0.15
CBWD3-201ENST00000360171 PRB2P02812 416 aaPredicted RBP14.12□□□□□ -0.15
CBWD3-201ENST00000360171 MIR7-3HGQ8N6C7 128 aa14.12□□□□□ -0.15
CBWD3-201ENST00000360171 B5MCH6 92 aa14.11□□□□□ -0.15
CBWD3-201ENST00000360171 DEFB130BP0DP73 79 aa14.11□□□□□ -0.15
CBWD3-201ENST00000360171 DEFB130AP0DP74 79 aa14.11□□□□□ -0.15
CBWD3-201ENST00000360171 FAM218AQ96MZ4 157 aa14.11□□□□□ -0.15
CBWD3-201ENST00000360171 TRBV6-8A0A0A6YYG3 113 aa14.1□□□□□ -0.15
CBWD3-201ENST00000360171 IGHV3OR16-9A0A0B4J2B5 98 aa14.1□□□□□ -0.15
CBWD3-201ENST00000360171 TRGV4A0A0C4DH28 118 aa14.1□□□□□ -0.15
CBWD3-201ENST00000360171 LOC100131303A0A0U1RQF7 123 aa14.1□□□□□ -0.15
CBWD3-201ENST00000360171 RETNQ9HD89 108 aa14.1□□□□□ -0.15
CBWD3-201ENST00000360171 C22orf24Q9Y442 160 aa14.1□□□□□ -0.15
CBWD3-201ENST00000360171 INAFM2P0DMQ5 153 aa14.1□□□□□ -0.15
CBWD3-201ENST00000360171 MIFP14174 115 aa14.1□□□□□ -0.15
CBWD3-201ENST00000360171 SND1-IT1Q9HBX3 110 aa14.1□□□□□ -0.15
CBWD3-201ENST00000360171 LINC00643Q86TS7 51 aa14.09□□□□□ -0.15
CBWD3-201ENST00000360171 LINC00337Q8N6G1 96 aa14.09□□□□□ -0.15
CBWD3-201ENST00000360171 MGAM2Q2M2H8 2515 aa14.09□□□□□ -0.15
CBWD3-201ENST00000360171 IGKV2-28A0A075B6P5 120 aa14.09□□□□□ -0.15
CBWD3-201ENST00000360171 IBA57-AS1B1ANH7 110 aa14.09□□□□□ -0.15
CBWD3-201ENST00000360171 CCDC179H3BU77 68 aa14.09□□□□□ -0.15
CBWD3-201ENST00000360171 IGKV2D-28P01615 120 aa14.09□□□□□ -0.15
CBWD3-201ENST00000360171 A0A087WZ39 114 aa14.08□□□□□ -0.16
CBWD3-201ENST00000360171 FHL2Q14192 279 aa14.08□□□□□ -0.16
CBWD3-201ENST00000360171 LYRM9A8MSI8 78 aa14.07□□□□□ -0.16
CBWD3-201ENST00000360171 CELA1Q9UNI1 258 aa14.07□□□□□ -0.16
CBWD3-201ENST00000360171 IGLV4-60A0A075B6I1 120 aa14.06□□□□□ -0.16
CBWD3-201ENST00000360171 SS18L2Q9UHA2 77 aa14.06□□□□□ -0.16
CBWD3-201ENST00000360171 H0YGX0 51 aa14.05□□□□□ -0.16
CBWD3-201ENST00000360171 MALP21145 153 aa14.05□□□□□ -0.16
CBWD3-201ENST00000360171 KPRPQ5T749 579 aaPredicted RBP14.05□□□□□ -0.16
CBWD3-201ENST00000360171 TOMM7Q9P0U1 55 aa14.05□□□□□ -0.16
CBWD3-201ENST00000360171 K7EIL1 84 aa14.04□□□□□ -0.16
CBWD3-201ENST00000360171 LINC00158P58513 81 aa14.04□□□□□ -0.16
CBWD3-201ENST00000360171 SMCR5Q8TEV8 140 aa14.04□□□□□ -0.16
CBWD3-201ENST00000360171 CCL18P55774 89 aa14.03□□□□□ -0.16
CBWD3-201ENST00000360171 CHCHD5Q9BSY4 110 aa14.03□□□□□ -0.16
CBWD3-201ENST00000360171 SMIM11BQ8TCY0 68 aa14.03□□□□□ -0.16
CBWD3-201ENST00000360171 TENM3Q9P273 2699 aa14.03□□□□□ -0.16
CBWD3-201ENST00000360171 DNAL4O96015 105 aa14□□□□□ -0.17
CBWD3-201ENST00000360171 CXCL5P42830 114 aa14□□□□□ -0.17
CBWD3-201ENST00000360171 IGKV3OR2-268A0A0C4DH90 116 aa14□□□□□ -0.17
CBWD3-201ENST00000360171 LINC00959A0A1B0GUT2 108 aa14□□□□□ -0.17
CBWD3-201ENST00000360171 DAD1P61803 113 aa13.99□□□□□ -0.17
CBWD3-201ENST00000360171 Q9HAA7 133 aa13.99□□□□□ -0.17
CBWD3-201ENST00000360171 ATP5G1P05496 136 aa13.99□□□□□ -0.17
CBWD3-201ENST00000360171 SPART-AS1P0CW21 52 aa13.98□□□□□ -0.17
CBWD3-201ENST00000360171 LINC01561Q8N1V8 128 aa13.98□□□□□ -0.17
CBWD3-201ENST00000360171 A0A1B0GUV1 79 aa13.98□□□□□ -0.17
CBWD3-201ENST00000360171 FAM236AA0A1B0GUQ0 79 aa13.97□□□□□ -0.17
CBWD3-201ENST00000360171 FAM236BA0A1B0GV22 79 aa13.97□□□□□ -0.17
CBWD3-201ENST00000360171 OBSCN-AS1Q96MR7 158 aa13.97□□□□□ -0.17
CBWD3-201ENST00000360171 A0A087WYN8 130 aa13.96□□□□□ -0.17
CBWD3-201ENST00000360171 C5orf38Q86SI9 138 aa13.96□□□□□ -0.17
CBWD3-201ENST00000360171 SVIPQ8NHG7 77 aa13.95□□□□□ -0.18
CBWD3-201ENST00000360171 Q8IZM0 81 aa13.95□□□□□ -0.18
CBWD3-201ENST00000360171 GAGE2AQ6NT46 116 aa13.94□□□□□ -0.18
CBWD3-201ENST00000360171 PRO0255Q9UI72 69 aa13.94□□□□□ -0.18
CBWD3-201ENST00000360171 PFN2P35080 140 aa13.93□□□□□ -0.18
CBWD3-201ENST00000360171 SS18Q15532 418 aa13.93□□□□□ -0.18
CBWD3-201ENST00000360171 C6orf226Q5I0X4 101 aa13.93□□□□□ -0.18
CBWD3-201ENST00000360171 GYPEP15421 78 aa13.93□□□□□ -0.18
CBWD3-201ENST00000360171 PAX4O43316 350 aa13.92□□□□□ -0.18
CBWD3-201ENST00000360171 C11orf68Q9H3H3 251 aaKnown RBP13.92□□□□□ -0.18
CBWD3-201ENST00000360171 MRAPQ8TCY5 172 aa13.92□□□□□ -0.18
CBWD3-201ENST00000360171 TM2D3Q9BRN9 247 aa13.9□□□□□ -0.18
CBWD3-201ENST00000360171 A0A0J9YWU9 116 aa13.9□□□□□ -0.18
CBWD3-201ENST00000360171 HTN3P15516 51 aa13.9□□□□□ -0.18
CBWD3-201ENST00000360171 KLK5Q9Y337 293 aaPredicted RBP13.9□□□□□ -0.18
CBWD3-201ENST00000360171 LECT2O14960 151 aa13.89□□□□□ -0.19
CBWD3-201ENST00000360171 TMEM126AQ9H061 195 aa13.89□□□□□ -0.19
CBWD3-201ENST00000360171 A0A1B0GX51 115 aa13.88□□□□□ -0.19
CBWD3-201ENST00000360171 OR13C6PQ8NH95 151 aa13.88□□□□□ -0.19
CBWD3-201ENST00000360171 DNHD1Q96M86 4753 aa13.87□□□□□ -0.19
CBWD3-201ENST00000360171 XCL1P47992 114 aa13.86□□□□□ -0.19
CBWD3-201ENST00000360171 LINC00167Q96N53 147 aa13.86□□□□□ -0.19
CBWD3-201ENST00000360171 NDUFC2O95298 119 aa13.86□□□□□ -0.19
CBWD3-201ENST00000360171 HIST1H4AP62805 103 aaKnown RBP13.86□□□□□ -0.19
CBWD3-201ENST00000360171 C9orf129Q5T035 196 aaKnown RBP13.86□□□□□ -0.19
CBWD3-201ENST00000360171 C14orf132Q9NPU4 83 aa13.86□□□□□ -0.19
CBWD3-201ENST00000360171 COX17Q14061 63 aa13.85□□□□□ -0.19
CBWD3-201ENST00000360171 ORMDL1Q9P0S3 153 aa13.85□□□□□ -0.19
CBWD3-201ENST00000360171 HUWE1Q7Z6Z7 4374 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms