RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 SFTA2Q6UW10 78 aa15.42■□□□□ 0.06
SDF4-202ENST00000360001 LBHQ53QV2 105 aaPredicted RBP15.41■□□□□ 0.06
SDF4-202ENST00000360001 CFAP161Q6P656 301 aa15.41■□□□□ 0.06
SDF4-202ENST00000360001 SPANXDQ9BXN6 97 aa15.4■□□□□ 0.06
SDF4-202ENST00000360001 SPANXCQ9NY87 97 aa15.4■□□□□ 0.06
SDF4-202ENST00000360001 CKS1BP61024 79 aa15.4■□□□□ 0.06
SDF4-202ENST00000360001 MEIG1Q5JSS6 88 aa15.4■□□□□ 0.06
SDF4-202ENST00000360001 CXCL5P42830 114 aa15.39■□□□□ 0.05
SDF4-202ENST00000360001 CIRBPQ14011 172 aaKnown RBP15.39■□□□□ 0.05
SDF4-202ENST00000360001 C15orf56Q8N910 161 aa15.39■□□□□ 0.05
SDF4-202ENST00000360001 RMI2Q96E14 147 aa15.39■□□□□ 0.05
SDF4-202ENST00000360001 COL5A1-AS1Q5SY13 56 aa15.38■□□□□ 0.05
SDF4-202ENST00000360001 C6orf223Q8N319 242 aa15.38■□□□□ 0.05
SDF4-202ENST00000360001 LINC00526Q96FQ7 95 aa15.38■□□□□ 0.05
SDF4-202ENST00000360001 SMIM13P0DJ93 91 aa15.38■□□□□ 0.05
SDF4-202ENST00000360001 A0A0U1RRA0 63 aa15.37■□□□□ 0.05
SDF4-202ENST00000360001 PTTG1IPP53801 180 aa15.37■□□□□ 0.05
SDF4-202ENST00000360001 DAND5Q8N907 189 aa15.37■□□□□ 0.05
SDF4-202ENST00000360001 Q6ZVH6 145 aa15.36■□□□□ 0.05
SDF4-202ENST00000360001 CASC10Q5T4H9 136 aa15.36■□□□□ 0.05
SDF4-202ENST00000360001 MUSTN1Q8IVN3 82 aa15.36■□□□□ 0.05
SDF4-202ENST00000360001 HIGD2BQ4VC39 106 aa15.35■□□□□ 0.05
SDF4-202ENST00000360001 NBDYA0A0U1RRE5 68 aa15.34■□□□□ 0.05
SDF4-202ENST00000360001 A6NDN8 102 aa15.34■□□□□ 0.05
SDF4-202ENST00000360001 NTN5Q8WTR8 489 aaPredicted RBP15.34■□□□□ 0.05
SDF4-202ENST00000360001 ERG28Q9UKR5 140 aa15.33■□□□□ 0.05
SDF4-202ENST00000360001 C10orf25Q5T742 122 aa15.33■□□□□ 0.04
SDF4-202ENST00000360001 UNQ6190/PRO20217Q6UXQ8 127 aa15.33■□□□□ 0.04
SDF4-202ENST00000360001 COX11Q9Y6N1 276 aa15.33■□□□□ 0.04
SDF4-202ENST00000360001 DNAH10Q8IVF4 4471 aa15.32■□□□□ 0.04
SDF4-202ENST00000360001 TTC32Q5I0X7 151 aa15.32■□□□□ 0.04
SDF4-202ENST00000360001 NHP2Q9NX24 153 aaKnown RBP15.32■□□□□ 0.04
SDF4-202ENST00000360001 GVQW2A0A096LPI5 108 aaPredicted RBP15.31■□□□□ 0.04
SDF4-202ENST00000360001 ZNF561-AS1K7EIQ3 104 aa15.31■□□□□ 0.04
SDF4-202ENST00000360001 EIF4EBP3O60516 100 aaPredicted RBP15.31■□□□□ 0.04
SDF4-202ENST00000360001 NPC2P61916 151 aa15.31■□□□□ 0.04
SDF4-202ENST00000360001 PFN2P35080 140 aa15.31■□□□□ 0.04
SDF4-202ENST00000360001 LINC00158P58513 81 aa15.31■□□□□ 0.04
SDF4-202ENST00000360001 TMEM238LA0A1B0GVL6 79 aa15.3■□□□□ 0.04
SDF4-202ENST00000360001 A6NJY4 79 aa15.3■□□□□ 0.04
SDF4-202ENST00000360001 IFITM1P13164 125 aa15.3■□□□□ 0.04
SDF4-202ENST00000360001 RPL24P83731 157 aaKnown RBP15.29■□□□□ 0.04
SDF4-202ENST00000360001 MIR7-3HGQ8N6C7 128 aa15.29■□□□□ 0.04
SDF4-202ENST00000360001 LINC00308Q8TCZ7 52 aa15.29■□□□□ 0.04
SDF4-202ENST00000360001 A4D1N5 150 aa15.29■□□□□ 0.04
SDF4-202ENST00000360001 A0A1B0GWB2 263 aa15.28■□□□□ 0.04
SDF4-202ENST00000360001 K7ERJ3 54 aa15.28■□□□□ 0.04
SDF4-202ENST00000360001 C9orf116Q5BN46 136 aaPredicted RBP15.28■□□□□ 0.04
SDF4-202ENST00000360001 SOSTDC1Q6X4U4 206 aa15.28■□□□□ 0.04
SDF4-202ENST00000360001 USP17L23D6RBM5 183 aa15.27■□□□□ 0.04
SDF4-202ENST00000360001 TAX1BP3O14907 124 aa15.27■□□□□ 0.04
SDF4-202ENST00000360001 C2orf48Q96LS8 159 aa15.27■□□□□ 0.04
SDF4-202ENST00000360001 CAMK2N2Q96S95 79 aa15.26■□□□□ 0.03
SDF4-202ENST00000360001 COX17Q14061 63 aa15.25■□□□□ 0.03
SDF4-202ENST00000360001 C6orf48Q9UBA6 75 aa15.25■□□□□ 0.03
SDF4-202ENST00000360001 C3orf84H3BNL1 204 aa15.24■□□□□ 0.03
SDF4-202ENST00000360001 CFC1BP0CG36 223 aa15.24■□□□□ 0.03
SDF4-202ENST00000360001 CFC1P0CG37 223 aa15.24■□□□□ 0.03
SDF4-202ENST00000360001 Q6ZRU5 148 aa15.23■□□□□ 0.03
SDF4-202ENST00000360001 PPDPFQ9H3Y8 114 aa15.23■□□□□ 0.03
SDF4-202ENST00000360001 F8WDY8 70 aa15.22■□□□□ 0.03
SDF4-202ENST00000360001 LECT2O14960 151 aa15.22■□□□□ 0.03
SDF4-202ENST00000360001 COPS9Q8WXC6 57 aa15.22■□□□□ 0.03
SDF4-202ENST00000360001 RAB37Q96AX2 223 aa15.22■□□□□ 0.03
SDF4-202ENST00000360001 TRBV30A0A0K0K1B3 111 aa15.22■□□□□ 0.03
SDF4-202ENST00000360001 M0R2N4 97 aa15.22■□□□□ 0.03
SDF4-202ENST00000360001 KMT2AQ03164 3969 aa15.21■□□□□ 0.02
SDF4-202ENST00000360001 PSCAO43653 123 aa15.2■□□□□ 0.02
SDF4-202ENST00000360001 WFDC2Q14508 124 aa15.2■□□□□ 0.02
SDF4-202ENST00000360001 ALMS1Q8TCU4 4167 aa15.2■□□□□ 0.02
SDF4-202ENST00000360001 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.2■□□□□ 0.02
SDF4-202ENST00000360001 A0A1B0GV90 55 aa15.2■□□□□ 0.02
SDF4-202ENST00000360001 SYCNQ0VAF6 134 aa15.19■□□□□ 0.02
SDF4-202ENST00000360001 Q6ZR54 194 aa15.18■□□□□ 0.02
SDF4-202ENST00000360001 Q6ZRN7 208 aaPredicted RBP15.18■□□□□ 0.02
SDF4-202ENST00000360001 A0A0B4J2C4 111 aa15.18■□□□□ 0.02
SDF4-202ENST00000360001 LY6G6CO95867 125 aa15.18■□□□□ 0.02
SDF4-202ENST00000360001 SLPIP03973 132 aa15.18■□□□□ 0.02
SDF4-202ENST00000360001 LINC00476Q8WZB0 136 aa15.18■□□□□ 0.02
SDF4-202ENST00000360001 DNAH6Q9C0G6 4158 aa15.18■□□□□ 0.02
SDF4-202ENST00000360001 LOC107984156A0A0G2JMH3 177 aa15.15■□□□□ 0.02
SDF4-202ENST00000360001 C9orf118A6NHY6 69 aa15.15■□□□□ 0.02
SDF4-202ENST00000360001 ARL17AQ8IVW1 177 aa15.15■□□□□ 0.02
SDF4-202ENST00000360001 SND1-IT1Q9HBX3 110 aa15.15■□□□□ 0.02
SDF4-202ENST00000360001 PRO1854Q9UHT4 67 aa15.15■□□□□ 0.02
SDF4-202ENST00000360001 NAA38Q9BRA0 125 aaKnown RBP15.14■□□□□ 0.01
SDF4-202ENST00000360001 CARD19Q96LW7 228 aa15.13■□□□□ 0.01
SDF4-202ENST00000360001 DNAH2Q9P225 4427 aa15.13■□□□□ 0.01
SDF4-202ENST00000360001 PGPEP1Q9NXJ5 209 aa15.12■□□□□ 0.01
SDF4-202ENST00000360001 H3BUT2 72 aa15.11■□□□□ 0.01
SDF4-202ENST00000360001 LRCOL1A6NCL2 159 aa15.11■□□□□ 0.01
SDF4-202ENST00000360001 RNF151Q2KHN1 245 aa15.11■□□□□ 0.01
SDF4-202ENST00000360001 NDUFC2-KCTD14E9PQ53 114 aa15.09■□□□□ 0.01
SDF4-202ENST00000360001 TSPAN13O95857 204 aa15.09■□□□□ 0.01
SDF4-202ENST00000360001 IGKV2-28A0A075B6P5 120 aa15.07■□□□□ 0
SDF4-202ENST00000360001 IGKV2D-28P01615 120 aa15.07■□□□□ 0
SDF4-202ENST00000360001 C14orf177Q52M58 125 aa15.07■□□□□ 0
SDF4-202ENST00000360001 Q6ZRP5 223 aa15.06■□□□□ 0
SDF4-202ENST00000360001 Q8NDZ9 215 aa15.05■□□□□ 0
SDF4-202ENST00000360001 XAGE1AQ9HD64 81 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms