RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 A8MTW9 85 aa7.04□□□□□ -1.28
CHD3-202ENST00000358181 ODF3Q96PU9 254 aa7.04□□□□□ -1.28
CHD3-202ENST00000358181 SORL1Q92673 2214 aa7.04□□□□□ -1.28
CHD3-202ENST00000358181 LINC00242Q5T6M2 205 aa7.04□□□□□ -1.28
CHD3-202ENST00000358181 MAPKAPK5-AS1Q8N8E1 139 aa7.04□□□□□ -1.28
CHD3-202ENST00000358181 KRTAP10-9P60411 292 aa7.03□□□□□ -1.28
CHD3-202ENST00000358181 PRRC2AP48634 2157 aaKnown RBP7.03□□□□□ -1.28
CHD3-202ENST00000358181 SMCR5Q8TEV8 140 aa7.03□□□□□ -1.28
CHD3-202ENST00000358181 ATG2AQ2TAZ0 1938 aa7.03□□□□□ -1.28
CHD3-202ENST00000358181 A0A087WYN8 130 aa7.03□□□□□ -1.28
CHD3-202ENST00000358181 Q6JHZ5 121 aa7.03□□□□□ -1.28
CHD3-202ENST00000358181 CENPFP49454 3210 aa7.03□□□□□ -1.28
CHD3-202ENST00000358181 A0A087WVE0 104 aa7.02□□□□□ -1.29
CHD3-202ENST00000358181 TSHBP01222 138 aa7.02□□□□□ -1.29
CHD3-202ENST00000358181 HIVEP3Q5T1R4 2406 aa7.02□□□□□ -1.29
CHD3-202ENST00000358181 BRWD1-AS2P59051 145 aa7.02□□□□□ -1.29
CHD3-202ENST00000358181 SONP18583 2426 aaKnown RBP7.02□□□□□ -1.29
CHD3-202ENST00000358181 PRO0628Q9UI54 55 aa7.02□□□□□ -1.29
CHD3-202ENST00000358181 WDR87Q6ZQQ6 2873 aa7.02□□□□□ -1.29
CHD3-202ENST00000358181 NTM-AS1Q6ZSK4 140 aa7.02□□□□□ -1.29
CHD3-202ENST00000358181 C6orf48Q9UBA6 75 aa7.02□□□□□ -1.29
CHD3-202ENST00000358181 TTC28Q96AY4 2481 aa7.02□□□□□ -1.29
CHD3-202ENST00000358181 LINC00313P59037 77 aa7.01□□□□□ -1.29
CHD3-202ENST00000358181 NOTCH2Q04721 2471 aa7.01□□□□□ -1.29
CHD3-202ENST00000358181 COX7CP15954 63 aa7.01□□□□□ -1.29
CHD3-202ENST00000358181 CDIP1Q9H305 208 aa7.01□□□□□ -1.29
CHD3-202ENST00000358181 PSMG3-AS1Q96PY0 264 aa7.01□□□□□ -1.29
CHD3-202ENST00000358181 SMIM26A0A096LP01 95 aa7.01□□□□□ -1.29
CHD3-202ENST00000358181 RPL37AP61513 92 aaKnown RBP7□□□□□ -1.29
CHD3-202ENST00000358181 PCNTO95613 3336 aa7□□□□□ -1.29
CHD3-202ENST00000358181 Q8N814 137 aa7□□□□□ -1.29
CHD3-202ENST00000358181 Q8IZM0 81 aa7□□□□□ -1.29
CHD3-202ENST00000358181 M0R2T5 61 aa7□□□□□ -1.29
CHD3-202ENST00000358181 FSTL3O95633 263 aa7□□□□□ -1.29
CHD3-202ENST00000358181 MBD6Q96DN6 1003 aa7□□□□□ -1.29
CHD3-202ENST00000358181 FAM19A4Q96LR4 140 aa6.99□□□□□ -1.29
CHD3-202ENST00000358181 NHLRC4P0CG21 123 aaPredicted RBP6.99□□□□□ -1.29
CHD3-202ENST00000358181 FBXL19-AS1Q494R0 122 aa6.99□□□□□ -1.29
CHD3-202ENST00000358181 EGFEM1PQ0D2K5 195 aa6.98□□□□□ -1.29
CHD3-202ENST00000358181 RTL8CO15255 209 aa6.98□□□□□ -1.29
CHD3-202ENST00000358181 COL5A1P20908 1838 aaPredicted RBP6.98□□□□□ -1.29
CHD3-202ENST00000358181 PIEZO2Q9H5I5 2752 aa6.98□□□□□ -1.29
CHD3-202ENST00000358181 TMEM254Q8TBM7 123 aa6.98□□□□□ -1.29
CHD3-202ENST00000358181 IGLV4-60A0A075B6I1 120 aa6.98□□□□□ -1.29
CHD3-202ENST00000358181 C22orf24Q9Y442 160 aa6.98□□□□□ -1.29
CHD3-202ENST00000358181 IGLV6-57P01721 117 aa6.97□□□□□ -1.29
CHD3-202ENST00000358181 PHF5AQ7RTV0 110 aaKnown RBP6.97□□□□□ -1.29
CHD3-202ENST00000358181 PRO3102Q9H379 93 aa6.97□□□□□ -1.29
CHD3-202ENST00000358181 C11orf71Q6IPW1 123 aa6.97□□□□□ -1.29
CHD3-202ENST00000358181 Q8N6K4 173 aa6.97□□□□□ -1.29
CHD3-202ENST00000358181 AVPP01185 164 aa6.96□□□□□ -1.29
CHD3-202ENST00000358181 NAV3Q8IVL0 2385 aa6.96□□□□□ -1.29
CHD3-202ENST00000358181 TRAV7A0A075B6U4 112 aa6.96□□□□□ -1.3
CHD3-202ENST00000358181 CRIP3Q6Q6R5 217 aa6.96□□□□□ -1.3
CHD3-202ENST00000358181 SMIM29Q86T20 159 aa6.96□□□□□ -1.3
CHD3-202ENST00000358181 CRIP1P50238 77 aa6.96□□□□□ -1.3
CHD3-202ENST00000358181 Q6ZRU5 148 aa6.96□□□□□ -1.3
CHD3-202ENST00000358181 CRIPTQ9P021 101 aa6.96□□□□□ -1.3
CHD3-202ENST00000358181 CDC42SE2Q9NRR3 84 aa6.96□□□□□ -1.3
CHD3-202ENST00000358181 PRR9Q5T870 116 aa6.95□□□□□ -1.3
CHD3-202ENST00000358181 LYPD5Q6UWN5 251 aa6.95□□□□□ -1.3
CHD3-202ENST00000358181 A0A0D9SG42 100 aa6.95□□□□□ -1.3
CHD3-202ENST00000358181 C9orf129Q5T035 196 aaKnown RBP6.95□□□□□ -1.3
CHD3-202ENST00000358181 Q8N3U1 123 aa6.95□□□□□ -1.3
CHD3-202ENST00000358181 SMR3BP02814 79 aaPredicted RBP6.95□□□□□ -1.3
CHD3-202ENST00000358181 ZNF575Q86XF7 245 aa6.94□□□□□ -1.3
CHD3-202ENST00000358181 ADAMTS20P59510 1910 aa6.94□□□□□ -1.3
CHD3-202ENST00000358181 PTPRSQ13332 1948 aa6.94□□□□□ -1.3
CHD3-202ENST00000358181 FHL3Q13643 280 aa6.94□□□□□ -1.3
CHD3-202ENST00000358181 SPATA3Q8NHX4 192 aa6.94□□□□□ -1.3
CHD3-202ENST00000358181 KIAA0087Q14695 138 aa6.94□□□□□ -1.3
CHD3-202ENST00000358181 ZNF295-AS1Q8N0V1 137 aa6.93□□□□□ -1.3
CHD3-202ENST00000358181 GAS8-AS1O95177 125 aa6.93□□□□□ -1.3
CHD3-202ENST00000358181 YPEL4Q96NS1 127 aa6.93□□□□□ -1.3
CHD3-202ENST00000358181 P0C879 139 aa6.92□□□□□ -1.3
CHD3-202ENST00000358181 EIF4EBP1Q13541 118 aaPredicted RBP6.92□□□□□ -1.3
CHD3-202ENST00000358181 NRACQ8N912 160 aa6.91□□□□□ -1.3
CHD3-202ENST00000358181 C11orf1Q9H5F2 150 aa6.91□□□□□ -1.3
CHD3-202ENST00000358181 IGLV5-37A0A075B6J1 123 aa6.91□□□□□ -1.3
CHD3-202ENST00000358181 AGRNO00468 2067 aa6.91□□□□□ -1.3
CHD3-202ENST00000358181 DNAH12Q6ZR08 3092 aa6.9□□□□□ -1.31
CHD3-202ENST00000358181 PTPRBP23467 1997 aa6.89□□□□□ -1.31
CHD3-202ENST00000358181 CSNK1G2-AS1Q8NCQ2 148 aa6.89□□□□□ -1.31
CHD3-202ENST00000358181 ACACBO00763 2458 aa6.88□□□□□ -1.31
CHD3-202ENST00000358181 F8WDY8 70 aa6.88□□□□□ -1.31
CHD3-202ENST00000358181 CPAMD8Q8IZJ3 1885 aa6.88□□□□□ -1.31
CHD3-202ENST00000358181 LRP4O75096 1905 aa6.88□□□□□ -1.31
CHD3-202ENST00000358181 ABCA2Q9BZC7 2435 aa6.88□□□□□ -1.31
CHD3-202ENST00000358181 C8orf87E5RJ46 101 aa6.88□□□□□ -1.31
CHD3-202ENST00000358181 EPM2AB3EWF7 344 aa6.88□□□□□ -1.31
CHD3-202ENST00000358181 Q6ZRP5 223 aa6.88□□□□□ -1.31
CHD3-202ENST00000358181 C11orf21Q9P2W6 132 aa6.88□□□□□ -1.31
CHD3-202ENST00000358181 MUC7Q8TAX7 377 aa6.87□□□□□ -1.31
CHD3-202ENST00000358181 Q8N2B8 174 aa6.86□□□□□ -1.31
CHD3-202ENST00000358181 LINC00315P59091 139 aa6.86□□□□□ -1.31
CHD3-202ENST00000358181 MUC22E2RYF6 1773 aaPredicted RBP6.86□□□□□ -1.31
CHD3-202ENST00000358181 C2orf91Q6ZV80 131 aa6.86□□□□□ -1.31
CHD3-202ENST00000358181 ANKHD1Q8IWZ3 2542 aaKnown RBP6.86□□□□□ -1.31
CHD3-202ENST00000358181 ODF3L2Q3SX64 289 aa6.85□□□□□ -1.31
CHD3-202ENST00000358181 A0A1W2PPR1 153 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms