RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 RASL10AQ92737 203 aa2.57□□□□□ -2
SMC1B-201ENST00000357450 XAGE1AQ9HD64 81 aa2.57□□□□□ -2
SMC1B-201ENST00000357450 KIF25-AS1Q9Y6Z4 181 aa2.57□□□□□ -2
SMC1B-201ENST00000357450 TMEM250H0YL14 139 aa2.57□□□□□ -2
SMC1B-201ENST00000357450 GIG44P09565 113 aaPredicted RBP2.57□□□□□ -2
SMC1B-201ENST00000357450 VAMP3Q15836 100 aa2.57□□□□□ -2
SMC1B-201ENST00000357450 RPL39LQ96EH5 51 aaKnown RBP2.57□□□□□ -2
SMC1B-201ENST00000357450 LINC00474Q9P2X8 69 aa2.57□□□□□ -2
SMC1B-201ENST00000357450 TRAV8-4A0A0B4J246 113 aa2.57□□□□□ -2
SMC1B-201ENST00000357450 A0A1B0GWB2 263 aa2.57□□□□□ -2
SMC1B-201ENST00000357450 PET117Q6UWS5 81 aa2.57□□□□□ -2
SMC1B-201ENST00000357450 SCGB1D4Q6XE38 83 aa2.57□□□□□ -2
SMC1B-201ENST00000357450 FAM231DQ6ZW35 169 aa2.57□□□□□ -2
SMC1B-201ENST00000357450 C18orf32Q8TCD1 76 aa2.57□□□□□ -2
SMC1B-201ENST00000357450 KLLNB2CW77 178 aa2.56□□□□□ -2
SMC1B-201ENST00000357450 MRPL52Q86TS9 123 aaKnown RBP2.56□□□□□ -2
SMC1B-201ENST00000357450 ORMDL3Q8N138 153 aa2.56□□□□□ -2
SMC1B-201ENST00000357450 CSNK1G2-AS1Q8NCQ2 148 aa2.56□□□□□ -2
SMC1B-201ENST00000357450 PPDPFQ9H3Y8 114 aa2.56□□□□□ -2
SMC1B-201ENST00000357450 IGHV1-58A0A0C4DH39 117 aa2.56□□□□□ -2
SMC1B-201ENST00000357450 C9orf153Q5TBE3 101 aa2.56□□□□□ -2
SMC1B-201ENST00000357450 Q6AWC8 147 aa2.56□□□□□ -2
SMC1B-201ENST00000357450 MUC17Q685J3 4493 aa2.56□□□□□ -2
SMC1B-201ENST00000357450 ETDCA0A1B0GVM5 59 aa2.56□□□□□ -2
SMC1B-201ENST00000357450 HERVK_113P61574 105 aa2.56□□□□□ -2
SMC1B-201ENST00000357450 HERV-K104P63124 156 aa2.56□□□□□ -2
SMC1B-201ENST00000357450 Q1RN00 199 aa2.56□□□□□ -2
SMC1B-201ENST00000357450 BOD1L2Q8IYS8 172 aa2.56□□□□□ -2
SMC1B-201ENST00000357450 TMEM126AQ9H061 195 aa2.56□□□□□ -2
SMC1B-201ENST00000357450 NAT8Q9UHE5 227 aa2.56□□□□□ -2
SMC1B-201ENST00000357450 IBA57-AS1B1ANH7 110 aa2.55□□□□□ -2
SMC1B-201ENST00000357450 NPC2P61916 151 aa2.55□□□□□ -2
SMC1B-201ENST00000357450 CIRBPQ14011 172 aaKnown RBP2.55□□□□□ -2
SMC1B-201ENST00000357450 SCXQ7RTU7 201 aa2.55□□□□□ -2
SMC1B-201ENST00000357450 FAM19A1Q7Z5A9 133 aa2.55□□□□□ -2
SMC1B-201ENST00000357450 NEXN-AS1Q8NBZ9 246 aa2.55□□□□□ -2
SMC1B-201ENST00000357450 A0A087WYN8 130 aa2.55□□□□□ -2
SMC1B-201ENST00000357450 LOC107984640A0A0U1RRK4 108 aa2.55□□□□□ -2
SMC1B-201ENST00000357450 A8MTW9 85 aa2.55□□□□□ -2
SMC1B-201ENST00000357450 D6R8Y8 96 aa2.55□□□□□ -2
SMC1B-201ENST00000357450 SEC11AP67812 179 aa2.55□□□□□ -2
SMC1B-201ENST00000357450 ZFP2Q6ZN57 461 aa2.55□□□□□ -2
SMC1B-201ENST00000357450 DIRC1Q969H9 104 aa2.55□□□□□ -2
SMC1B-201ENST00000357450 DNAJC30Q96LL9 226 aa2.55□□□□□ -2
SMC1B-201ENST00000357450 LITAFQ99732 161 aa2.55□□□□□ -2
SMC1B-201ENST00000357450 MAP1LC3CQ9BXW4 147 aa2.55□□□□□ -2
SMC1B-201ENST00000357450 PPBPP02775 128 aa2.55□□□□□ -2
SMC1B-201ENST00000357450 PNRC1Q12796 327 aaPredicted RBP2.55□□□□□ -2
SMC1B-201ENST00000357450 Q8N814 137 aa2.55□□□□□ -2
SMC1B-201ENST00000357450 CHAC1Q9BUX1 264 aa2.55□□□□□ -2
SMC1B-201ENST00000357450 IGLC6P0CF74 106 aa2.54□□□□□ -2
SMC1B-201ENST00000357450 NRACQ8N912 160 aa2.54□□□□□ -2
SMC1B-201ENST00000357450 TRBV7-9A0A0J9YWB2 115 aa2.54□□□□□ -2
SMC1B-201ENST00000357450 RPL37AP8A6NKH3 93 aa2.54□□□□□ -2
SMC1B-201ENST00000357450 H3BNG1 76 aa2.54□□□□□ -2
SMC1B-201ENST00000357450 C9orf116Q5BN46 136 aaPredicted RBP2.54□□□□□ -2
SMC1B-201ENST00000357450 SFRP2Q96HF1 295 aa2.54□□□□□ -2
SMC1B-201ENST00000357450 NDUFA12Q9UI09 145 aa2.54□□□□□ -2
SMC1B-201ENST00000357450 RYR1P21817 5038 aa2.54□□□□□ -2
SMC1B-201ENST00000357450 IGKV2-28A0A075B6P5 120 aa2.54□□□□□ -2
SMC1B-201ENST00000357450 IGKV2D-28P01615 120 aa2.54□□□□□ -2
SMC1B-201ENST00000357450 LGALS3P17931 250 aaKnown RBP2.54□□□□□ -2
SMC1B-201ENST00000357450 PMVKQ15126 192 aa2.54□□□□□ -2
SMC1B-201ENST00000357450 TAL2Q16559 108 aa2.54□□□□□ -2
SMC1B-201ENST00000357450 Q8N1X5 172 aa2.54□□□□□ -2
SMC1B-201ENST00000357450 DEFB105AQ8NG35 78 aa2.54□□□□□ -2
SMC1B-201ENST00000357450 C20orf202A1L168 122 aa2.53□□□□□ -2
SMC1B-201ENST00000357450 PLAC8L1A1L4L8 177 aa2.53□□□□□ -2
SMC1B-201ENST00000357450 F8WEM9 126 aa2.53□□□□□ -2
SMC1B-201ENST00000357450 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.53□□□□□ -2
SMC1B-201ENST00000357450 OXTP01178 125 aa2.53□□□□□ -2
SMC1B-201ENST00000357450 KRTAP10-1P60331 282 aa2.53□□□□□ -2
SMC1B-201ENST00000357450 KRTDAPP60985 99 aa2.53□□□□□ -2
SMC1B-201ENST00000357450 Q6Q795 121 aa2.53□□□□□ -2
SMC1B-201ENST00000357450 TRAPPC1Q9Y5R8 145 aa2.53□□□□□ -2
SMC1B-201ENST00000357450 IGLV4-69A0A075B6H9 119 aa2.53□□□□□ -2
SMC1B-201ENST00000357450 H7C2G1 150 aa2.53□□□□□ -2
SMC1B-201ENST00000357450 DLEU1O43261 78 aa2.53□□□□□ -2
SMC1B-201ENST00000357450 SERF1AO75920 110 aa2.53□□□□□ -2
SMC1B-201ENST00000357450 A0A1B0GW15 77 aa2.53□□□□□ -2
SMC1B-201ENST00000357450 RNASE3P12724 160 aaKnown RBP2.53□□□□□ -2
SMC1B-201ENST00000357450 RPL24P83731 157 aaKnown RBP2.53□□□□□ -2
SMC1B-201ENST00000357450 ORMDL2Q53FV1 153 aa2.53□□□□□ -2
SMC1B-201ENST00000357450 LINC01545Q5VT33 79 aa2.53□□□□□ -2
SMC1B-201ENST00000357450 CHCHD7Q9BUK0 85 aa2.53□□□□□ -2
SMC1B-201ENST00000357450 PAM16Q9Y3D7 125 aa2.53□□□□□ -2
SMC1B-201ENST00000357450 C3orf79P0CE67 100 aa2.53□□□□□ -2.01
SMC1B-201ENST00000357450 Q6ZRP5 223 aa2.53□□□□□ -2.01
SMC1B-201ENST00000357450 IGLV4-60A0A075B6I1 120 aa2.52□□□□□ -2.01
SMC1B-201ENST00000357450 A6NDN8 102 aa2.52□□□□□ -2.01
SMC1B-201ENST00000357450 M0R143 59 aa2.52□□□□□ -2.01
SMC1B-201ENST00000357450 RPL39P62891 51 aaKnown RBP2.52□□□□□ -2.01
SMC1B-201ENST00000357450 SRSF9Q13242 221 aaKnown RBP eCLIP2.52□□□□□ -2.01
SMC1B-201ENST00000357450 LAGE3Q14657 143 aa2.52□□□□□ -2.01
SMC1B-201ENST00000357450 COX6B2Q6YFQ2 88 aa2.52□□□□□ -2.01
SMC1B-201ENST00000357450 C11orf72Q8NBR9 251 aa2.52□□□□□ -2.01
SMC1B-201ENST00000357450 Q9UF83 564 aa2.52□□□□□ -2.01
SMC1B-201ENST00000357450 SPINK8P0C7L1 97 aa2.52□□□□□ -2.01
SMC1B-201ENST00000357450 UBE2D2P62837 147 aa2.52□□□□□ -2.01
SMC1B-201ENST00000357450 HRCT1Q6UXD1 115 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms