RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 C22orf24Q9Y442 160 aa9.61□□□□□ -0.87
TRIM4-203ENST00000355947 LAMTOR3Q9UHA4 124 aa9.61□□□□□ -0.87
TRIM4-203ENST00000355947 HTN3P15516 51 aa9.61□□□□□ -0.87
TRIM4-203ENST00000355947 BEAN1Q3B7T3 259 aa9.61□□□□□ -0.87
TRIM4-203ENST00000355947 C20orf197Q8N268 126 aa9.61□□□□□ -0.87
TRIM4-203ENST00000355947 TMEM86BQ8N661 226 aa9.61□□□□□ -0.87
TRIM4-203ENST00000355947 RPL28P46779 137 aaKnown RBP9.6□□□□□ -0.87
TRIM4-203ENST00000355947 GHRHP01286 108 aa9.6□□□□□ -0.87
TRIM4-203ENST00000355947 S100A7L2Q5SY68 101 aa9.59□□□□□ -0.87
TRIM4-203ENST00000355947 SCXQ7RTU7 201 aa9.58□□□□□ -0.88
TRIM4-203ENST00000355947 CCL24O00175 119 aa9.57□□□□□ -0.88
TRIM4-203ENST00000355947 HRCT1Q6UXD1 115 aa9.57□□□□□ -0.88
TRIM4-203ENST00000355947 H0YGX0 51 aa9.57□□□□□ -0.88
TRIM4-203ENST00000355947 KRTAP10-9P60411 292 aa9.57□□□□□ -0.88
TRIM4-203ENST00000355947 GYPEP15421 78 aa9.57□□□□□ -0.88
TRIM4-203ENST00000355947 Q6YL49 198 aa9.57□□□□□ -0.88
TRIM4-203ENST00000355947 TRBV10-1A0A0K0K1A3 114 aa9.56□□□□□ -0.88
TRIM4-203ENST00000355947 SMIM9A6NGZ8 99 aa9.56□□□□□ -0.88
TRIM4-203ENST00000355947 LINC00269Q8N2A0 174 aa9.56□□□□□ -0.88
TRIM4-203ENST00000355947 Q8N3U1 123 aa9.56□□□□□ -0.88
TRIM4-203ENST00000355947 LINC01561Q8N1V8 128 aa9.55□□□□□ -0.88
TRIM4-203ENST00000355947 SERP2Q8N6R1 65 aa9.55□□□□□ -0.88
TRIM4-203ENST00000355947 FAM222AQ5U5X8 452 aa9.55□□□□□ -0.88
TRIM4-203ENST00000355947 LINC01600Q96MT4 127 aa9.55□□□□□ -0.88
TRIM4-203ENST00000355947 C6orf99Q4VX62 202 aa9.54□□□□□ -0.88
TRIM4-203ENST00000355947 OVOL2Q9BRP0 275 aa9.54□□□□□ -0.88
TRIM4-203ENST00000355947 UNC79Q9P2D8 2635 aa9.54□□□□□ -0.88
TRIM4-203ENST00000355947 TRBV6-8A0A0A6YYG3 113 aa9.54□□□□□ -0.88
TRIM4-203ENST00000355947 C4orf26Q17RF5 130 aa9.54□□□□□ -0.88
TRIM4-203ENST00000355947 USP24Q9UPU5 2620 aa9.54□□□□□ -0.88
TRIM4-203ENST00000355947 PF4P02776 101 aa9.54□□□□□ -0.88
TRIM4-203ENST00000355947 ANGP03950 147 aaKnown RBP9.54□□□□□ -0.88
TRIM4-203ENST00000355947 C4orf3Q8WVX3 66 aa9.54□□□□□ -0.88
TRIM4-203ENST00000355947 C2orf48Q96LS8 159 aa9.54□□□□□ -0.88
TRIM4-203ENST00000355947 SS18Q15532 418 aa9.53□□□□□ -0.88
TRIM4-203ENST00000355947 SNURFQ9Y675 71 aa9.53□□□□□ -0.88
TRIM4-203ENST00000355947 UBL5Q9BZL1 73 aa9.52□□□□□ -0.88
TRIM4-203ENST00000355947 PRORYQ9H606 182 aa9.52□□□□□ -0.88
TRIM4-203ENST00000355947 LINC00959A0A1B0GUT2 108 aa9.52□□□□□ -0.89
TRIM4-203ENST00000355947 IGHV3OR16-9A0A0B4J2B5 98 aa9.52□□□□□ -0.89
TRIM4-203ENST00000355947 CR1P17927 2039 aa9.51□□□□□ -0.89
TRIM4-203ENST00000355947 IBA57-AS1B1ANH7 110 aa9.51□□□□□ -0.89
TRIM4-203ENST00000355947 IGHV4-31P0DP07 118 aa9.51□□□□□ -0.89
TRIM4-203ENST00000355947 UPK3BQ9BT76 320 aa9.51□□□□□ -0.89
TRIM4-203ENST00000355947 Q6JHZ5 121 aa9.5□□□□□ -0.89
TRIM4-203ENST00000355947 TRBV6-4A0A1B0GX49 114 aa9.5□□□□□ -0.89
TRIM4-203ENST00000355947 CRYGAP11844 174 aa9.49□□□□□ -0.89
TRIM4-203ENST00000355947 FHL2Q14192 279 aa9.49□□□□□ -0.89
TRIM4-203ENST00000355947 C5orf47Q569G3 176 aa9.49□□□□□ -0.89
TRIM4-203ENST00000355947 DPH3Q96FX2 82 aa9.49□□□□□ -0.89
TRIM4-203ENST00000355947 C16orf74Q96GX8 76 aa9.48□□□□□ -0.89
TRIM4-203ENST00000355947 BBC3Q96PG8 261 aaPredicted RBP9.48□□□□□ -0.89
TRIM4-203ENST00000355947 DSCR9P59020 149 aa9.47□□□□□ -0.89
TRIM4-203ENST00000355947 XAGE1AQ9HD64 81 aa9.47□□□□□ -0.89
TRIM4-203ENST00000355947 A0A087WZ39 114 aa9.47□□□□□ -0.89
TRIM4-203ENST00000355947 CCKP06307 115 aa9.47□□□□□ -0.89
TRIM4-203ENST00000355947 C6orf223Q8N319 242 aa9.47□□□□□ -0.89
TRIM4-203ENST00000355947 ATRQ13535 2644 aa9.46□□□□□ -0.89
TRIM4-203ENST00000355947 J3QLI3 93 aa9.46□□□□□ -0.9
TRIM4-203ENST00000355947 Q8N814 137 aa9.46□□□□□ -0.9
TRIM4-203ENST00000355947 M0R2N4 97 aa9.45□□□□□ -0.9
TRIM4-203ENST00000355947 FASNP49327 2511 aaKnown RBP9.45□□□□□ -0.9
TRIM4-203ENST00000355947 OXTP01178 125 aa9.45□□□□□ -0.9
TRIM4-203ENST00000355947 DNAJC9-AS1A6NH13 148 aa9.44□□□□□ -0.9
TRIM4-203ENST00000355947 TMEM258P61165 79 aa9.44□□□□□ -0.9
TRIM4-203ENST00000355947 UBR5O95071 2799 aaPredicted RBP9.44□□□□□ -0.9
TRIM4-203ENST00000355947 LINC00482Q8N8I6 264 aa9.44□□□□□ -0.9
TRIM4-203ENST00000355947 RBM3P98179 157 aaKnown RBP9.44□□□□□ -0.9
TRIM4-203ENST00000355947 Q6ZQY7 126 aa9.44□□□□□ -0.9
TRIM4-203ENST00000355947 TMEM256-PLSCR3K7ERE1 68 aa9.43□□□□□ -0.9
TRIM4-203ENST00000355947 CHCHD10Q8WYQ3 142 aaPredicted RBP9.43□□□□□ -0.9
TRIM4-203ENST00000355947 GIG44P09565 113 aaPredicted RBP9.43□□□□□ -0.9
TRIM4-203ENST00000355947 UNQ6190/PRO20217Q6UXQ8 127 aa9.43□□□□□ -0.9
TRIM4-203ENST00000355947 ZNF843Q8N446 348 aa9.43□□□□□ -0.9
TRIM4-203ENST00000355947 SPATA3Q8NHX4 192 aa9.43□□□□□ -0.9
TRIM4-203ENST00000355947 JMJD7-PLA2G4BH0Y9G9 81 aa9.42□□□□□ -0.9
TRIM4-203ENST00000355947 DAD1P61803 113 aa9.42□□□□□ -0.9
TRIM4-203ENST00000355947 TEP1Q99973 2627 aaKnown RBP9.41□□□□□ -0.9
TRIM4-203ENST00000355947 ITPR2Q14571 2701 aa9.41□□□□□ -0.9
TRIM4-203ENST00000355947 HECTD1Q9ULT8 2610 aa9.41□□□□□ -0.9
TRIM4-203ENST00000355947 DEFB135Q30KP9 77 aa9.41□□□□□ -0.9
TRIM4-203ENST00000355947 LINC01006Q8NI28 216 aa9.41□□□□□ -0.9
TRIM4-203ENST00000355947 RMI2Q96E14 147 aa9.41□□□□□ -0.9
TRIM4-203ENST00000355947 TRAV25A0A0B4J276 109 aa9.4□□□□□ -0.9
TRIM4-203ENST00000355947 PLAC8L1A1L4L8 177 aa9.4□□□□□ -0.9
TRIM4-203ENST00000355947 C10orf25Q5T742 122 aa9.4□□□□□ -0.9
TRIM4-203ENST00000355947 AKAP9Q99996 3911 aa9.4□□□□□ -0.9
TRIM4-203ENST00000355947 Q8N9L7 120 aa9.4□□□□□ -0.91
TRIM4-203ENST00000355947 KLK12Q9UKR0 248 aa9.4□□□□□ -0.91
TRIM4-203ENST00000355947 A0A096LNT2 108 aa9.39□□□□□ -0.91
TRIM4-203ENST00000355947 TRAV10A0A0B4J240 114 aa9.39□□□□□ -0.91
TRIM4-203ENST00000355947 FAM236DA0A1B0GTK5 79 aa9.39□□□□□ -0.91
TRIM4-203ENST00000355947 FAM236CP0DP71 79 aa9.39□□□□□ -0.91
TRIM4-203ENST00000355947 REG3AQ06141 175 aa9.38□□□□□ -0.91
TRIM4-203ENST00000355947 SPAG11BQ08648 103 aa9.38□□□□□ -0.91
TRIM4-203ENST00000355947 PRB2P02812 416 aaPredicted RBP9.38□□□□□ -0.91
TRIM4-203ENST00000355947 VWFP04275 2813 aa9.38□□□□□ -0.91
TRIM4-203ENST00000355947 Q8NDZ9 215 aa9.38□□□□□ -0.91
TRIM4-203ENST00000355947 NANOS2P60321 138 aaKnown RBP9.37□□□□□ -0.91
TRIM4-203ENST00000355947 HIGD2BQ4VC39 106 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms