RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 COA6Q5JTJ3 125 aaKnown RBP9.74□□□□□ -0.85
PDGFA-201ENST00000354513 Q6ZN92 141 aa9.74□□□□□ -0.85
PDGFA-201ENST00000354513 COX7A2LO14548 114 aa9.73□□□□□ -0.85
PDGFA-201ENST00000354513 PAPPA-AS1Q5QFB9 102 aa9.73□□□□□ -0.85
PDGFA-201ENST00000354513 VCX2Q9H322 139 aa9.73□□□□□ -0.85
PDGFA-201ENST00000354513 TRAV13-1A0A0B4J241 112 aa9.72□□□□□ -0.85
PDGFA-201ENST00000354513 IFITM10A6NMD0 228 aa9.72□□□□□ -0.85
PDGFA-201ENST00000354513 ATP5LO75964 103 aa9.72□□□□□ -0.85
PDGFA-201ENST00000354513 ZC2HC1BQ5TFG8 222 aa9.72□□□□□ -0.85
PDGFA-201ENST00000354513 TEX43Q6ZNM6 134 aa9.72□□□□□ -0.85
PDGFA-201ENST00000354513 PSORS1C2Q9UIG4 136 aa9.72□□□□□ -0.85
PDGFA-201ENST00000354513 APOMO95445 188 aa9.71□□□□□ -0.86
PDGFA-201ENST00000354513 S100A6P06703 90 aa9.71□□□□□ -0.86
PDGFA-201ENST00000354513 C9orf116Q5BN46 136 aaPredicted RBP9.71□□□□□ -0.86
PDGFA-201ENST00000354513 C5orf38Q86SI9 138 aa9.71□□□□□ -0.86
PDGFA-201ENST00000354513 C2orf48Q96LS8 159 aa9.71□□□□□ -0.86
PDGFA-201ENST00000354513 CAMK2N2Q96S95 79 aa9.71□□□□□ -0.86
PDGFA-201ENST00000354513 AMELXQ99217 191 aa9.71□□□□□ -0.86
PDGFA-201ENST00000354513 C2orf88Q9BSF0 95 aa9.71□□□□□ -0.86
PDGFA-201ENST00000354513 LEPROTL1O95214 131 aa9.7□□□□□ -0.86
PDGFA-201ENST00000354513 FABP4P15090 132 aa9.7□□□□□ -0.86
PDGFA-201ENST00000354513 MALP21145 153 aa9.7□□□□□ -0.86
PDGFA-201ENST00000354513 LINC00173Q6ZV60 143 aa9.7□□□□□ -0.86
PDGFA-201ENST00000354513 PHF5AQ7RTV0 110 aaKnown RBP9.7□□□□□ -0.86
PDGFA-201ENST00000354513 KRTAP11-1Q8IUC1 163 aa9.69□□□□□ -0.86
PDGFA-201ENST00000354513 IFI27L1Q96BM0 104 aa9.69□□□□□ -0.86
PDGFA-201ENST00000354513 HSPB8Q9UJY1 196 aa9.69□□□□□ -0.86
PDGFA-201ENST00000354513 RPL18AQ02543 176 aaKnown RBP9.68□□□□□ -0.86
PDGFA-201ENST00000354513 SPAG11BQ08648 103 aa9.68□□□□□ -0.86
PDGFA-201ENST00000354513 PMVKQ15126 192 aa9.68□□□□□ -0.86
PDGFA-201ENST00000354513 CST9LQ9H4G1 147 aa9.67□□□□□ -0.86
PDGFA-201ENST00000354513 UBE2D1P51668 147 aa9.66□□□□□ -0.86
PDGFA-201ENST00000354513 RNF151Q2KHN1 245 aa9.66□□□□□ -0.86
PDGFA-201ENST00000354513 C10orf25Q5T742 122 aa9.66□□□□□ -0.86
PDGFA-201ENST00000354513 IGHV3OR16-9A0A0B4J2B5 98 aa9.65□□□□□ -0.86
PDGFA-201ENST00000354513 FAM168BA1KXE4 195 aa9.65□□□□□ -0.86
PDGFA-201ENST00000354513 SNRPEP62304 92 aaKnown RBP9.65□□□□□ -0.86
PDGFA-201ENST00000354513 KRTAP7-1Q8IUC3 87 aa9.65□□□□□ -0.86
PDGFA-201ENST00000354513 OR10D4PQ8NGN7 298 aa9.65□□□□□ -0.86
PDGFA-201ENST00000354513 PACRGQ96M98 296 aaPredicted RBP9.65□□□□□ -0.86
PDGFA-201ENST00000354513 TMA7Q9Y2S6 64 aaKnown RBP9.65□□□□□ -0.86
PDGFA-201ENST00000354513 H0Y8G0 127 aa9.64□□□□□ -0.87
PDGFA-201ENST00000354513 S100A2P29034 98 aa9.64□□□□□ -0.87
PDGFA-201ENST00000354513 C1orf137Q5JT78 98 aa9.64□□□□□ -0.87
PDGFA-201ENST00000354513 LINC00242Q5T6M2 205 aa9.64□□□□□ -0.87
PDGFA-201ENST00000354513 HIST3H2BBQ8N257 126 aa9.64□□□□□ -0.87
PDGFA-201ENST00000354513 ORAOV1Q8WV07 137 aa9.64□□□□□ -0.87
PDGFA-201ENST00000354513 MRPL35Q9NZE8 188 aaKnown RBP9.64□□□□□ -0.87
PDGFA-201ENST00000354513 MAP1LC3CQ9BXW4 147 aa9.63□□□□□ -0.87
PDGFA-201ENST00000354513 TRAV12-1A0A0B4J245 112 aa9.62□□□□□ -0.87
PDGFA-201ENST00000354513 SEC11AP67812 179 aa9.62□□□□□ -0.87
PDGFA-201ENST00000354513 FAM19A3Q7Z5A8 133 aa9.62□□□□□ -0.87
PDGFA-201ENST00000354513 C6orf48Q9UBA6 75 aa9.62□□□□□ -0.87
PDGFA-201ENST00000354513 C5orf52A6NGY3 159 aa9.61□□□□□ -0.87
PDGFA-201ENST00000354513 IGLV7-43P04211 117 aa9.61□□□□□ -0.87
PDGFA-201ENST00000354513 TLX1NBP0CAT3 122 aa9.61□□□□□ -0.87
PDGFA-201ENST00000354513 GEMIN7Q9H840 131 aaKnown RBP9.61□□□□□ -0.87
PDGFA-201ENST00000354513 CHTOPQ9Y3Y2 248 aaKnown RBP9.61□□□□□ -0.87
PDGFA-201ENST00000354513 TINCRA0A1B0GVN0 87 aa9.6□□□□□ -0.87
PDGFA-201ENST00000354513 HERVK_113P63121 156 aa9.6□□□□□ -0.87
PDGFA-201ENST00000354513 KIAA0087Q14695 138 aa9.6□□□□□ -0.87
PDGFA-201ENST00000354513 UNQ6190/PRO20217Q6UXQ8 127 aa9.6□□□□□ -0.87
PDGFA-201ENST00000354513 PRR26Q8N8Z3 221 aa9.6□□□□□ -0.87
PDGFA-201ENST00000354513 IGLC3P0DOY3 106 aa9.59□□□□□ -0.87
PDGFA-201ENST00000354513 HIST1H2BLQ99880 126 aa9.59□□□□□ -0.87
PDGFA-201ENST00000354513 F8WDY8 70 aa9.58□□□□□ -0.88
PDGFA-201ENST00000354513 SYS1-DBNDD2H3BUS1 97 aa9.58□□□□□ -0.88
PDGFA-201ENST00000354513 NDUFA1O15239 70 aa9.58□□□□□ -0.88
PDGFA-201ENST00000354513 KRTAP1-4P0C5Y4 121 aa9.58□□□□□ -0.88
PDGFA-201ENST00000354513 KRTDAPP60985 99 aa9.58□□□□□ -0.88
PDGFA-201ENST00000354513 LINC00469Q8N7U9 141 aa9.58□□□□□ -0.88
PDGFA-201ENST00000354513 F8VRH5 84 aa9.57□□□□□ -0.88
PDGFA-201ENST00000354513 H0Y9J4 135 aa9.57□□□□□ -0.88
PDGFA-201ENST00000354513 C3orf79P0CE67 100 aa9.57□□□□□ -0.88
PDGFA-201ENST00000354513 FAM19A5Q7Z5A7 132 aaPredicted RBP9.57□□□□□ -0.88
PDGFA-201ENST00000354513 CDKN2A-AS1Q9UH64 79 aa9.57□□□□□ -0.88
PDGFA-201ENST00000354513 A0A087WZ39 114 aa9.56□□□□□ -0.88
PDGFA-201ENST00000354513 C11orf86A6NJI1 115 aa9.56□□□□□ -0.88
PDGFA-201ENST00000354513 PET117Q6UWS5 81 aa9.56□□□□□ -0.88
PDGFA-201ENST00000354513 PMCHL2Q9BQD1 86 aa9.56□□□□□ -0.88
PDGFA-201ENST00000354513 IGLV5-45A0A087WSX0 123 aa9.56□□□□□ -0.88
PDGFA-201ENST00000354513 DIRC1Q969H9 104 aa9.56□□□□□ -0.88
PDGFA-201ENST00000354513 ZNF22P17026 224 aaPredicted RBP9.55□□□□□ -0.88
PDGFA-201ENST00000354513 GAGE2EQ4V326 116 aa9.55□□□□□ -0.88
PDGFA-201ENST00000354513 TMEM170BQ5T4T1 132 aa9.55□□□□□ -0.88
PDGFA-201ENST00000354513 LINC01561Q8N1V8 128 aa9.55□□□□□ -0.88
PDGFA-201ENST00000354513 GAGE2DQ9UEU5 116 aa9.55□□□□□ -0.88
PDGFA-201ENST00000354513 H3BRM9 83 aa9.54□□□□□ -0.88
PDGFA-201ENST00000354513 DPM2O94777 84 aa9.54□□□□□ -0.88
PDGFA-201ENST00000354513 PLNP26678 52 aa9.54□□□□□ -0.88
PDGFA-201ENST00000354513 C9orf129Q5T035 196 aaKnown RBP9.54□□□□□ -0.88
PDGFA-201ENST00000354513 LINC01545Q5VT33 79 aa9.54□□□□□ -0.88
PDGFA-201ENST00000354513 C2orf82Q6UX34 121 aa9.54□□□□□ -0.88
PDGFA-201ENST00000354513 M0QXV9 152 aa9.53□□□□□ -0.88
PDGFA-201ENST00000354513 SPINK8P0C7L1 97 aa9.53□□□□□ -0.88
PDGFA-201ENST00000354513 C20orf202A1L168 122 aa9.52□□□□□ -0.89
PDGFA-201ENST00000354513 IGKCP01834 107 aa9.52□□□□□ -0.89
PDGFA-201ENST00000354513 SMIM1B2RUZ4 78 aa9.51□□□□□ -0.89
PDGFA-201ENST00000354513 TRBV30A0A0K0K1B3 111 aa9.5□□□□□ -0.89
PDGFA-201ENST00000354513 TOMM7Q9P0U1 55 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms