RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 FAM19A3Q7Z5A8 133 aa9.43□□□□□ -0.9
DDX55-202ENST00000354291 KRTAP11-1Q8IUC1 163 aa9.43□□□□□ -0.9
DDX55-202ENST00000354291 PRSS2P07478 247 aa9.42□□□□□ -0.9
DDX55-202ENST00000354291 ZC2HC1BQ5TFG8 222 aa9.42□□□□□ -0.9
DDX55-202ENST00000354291 FAM19A5Q7Z5A7 132 aaPredicted RBP9.42□□□□□ -0.9
DDX55-202ENST00000354291 TRAV9-1A0A075B6T8 112 aa9.41□□□□□ -0.9
DDX55-202ENST00000354291 CKS1BP61024 79 aa9.41□□□□□ -0.9
DDX55-202ENST00000354291 C6orf226Q5I0X4 101 aa9.41□□□□□ -0.9
DDX55-202ENST00000354291 TMEM218A2RU14 115 aa9.4□□□□□ -0.9
DDX55-202ENST00000354291 HERVK_113P63121 156 aa9.4□□□□□ -0.9
DDX55-202ENST00000354291 Q8IZM0 81 aa9.4□□□□□ -0.9
DDX55-202ENST00000354291 TOMM6Q96B49 74 aa9.4□□□□□ -0.9
DDX55-202ENST00000354291 TIMM17AQ99595 171 aa9.4□□□□□ -0.9
DDX55-202ENST00000354291 TOMM7Q9P0U1 55 aa9.4□□□□□ -0.9
DDX55-202ENST00000354291 KIAA1644Q3SXP7 199 aa9.39□□□□□ -0.91
DDX55-202ENST00000354291 ALKBH7Q9BT30 221 aaPredicted RBP9.39□□□□□ -0.91
DDX55-202ENST00000354291 GEMIN7Q9H840 131 aaKnown RBP9.39□□□□□ -0.91
DDX55-202ENST00000354291 LINC01549A6NIU2 74 aa9.38□□□□□ -0.91
DDX55-202ENST00000354291 M0QXV9 152 aa9.38□□□□□ -0.91
DDX55-202ENST00000354291 ADCYAP1P18509 176 aa9.38□□□□□ -0.91
DDX55-202ENST00000354291 UBE2BP63146 152 aa9.38□□□□□ -0.91
DDX55-202ENST00000354291 ERASQ7Z444 233 aa9.38□□□□□ -0.91
DDX55-202ENST00000354291 CDIP1Q9H305 208 aa9.38□□□□□ -0.91
DDX55-202ENST00000354291 CARHSP1Q9Y2V2 147 aaKnown RBP9.38□□□□□ -0.91
DDX55-202ENST00000354291 S100PP25815 95 aa9.37□□□□□ -0.91
DDX55-202ENST00000354291 C9orf129Q5T035 196 aaKnown RBP9.37□□□□□ -0.91
DDX55-202ENST00000354291 KRTAP7-1Q8IUC3 87 aa9.37□□□□□ -0.91
DDX55-202ENST00000354291 SCGB3A1Q96QR1 104 aa9.37□□□□□ -0.91
DDX55-202ENST00000354291 GNB1LQ9BYB4 327 aa9.37□□□□□ -0.91
DDX55-202ENST00000354291 CDKN2A-AS1Q9UH64 79 aa9.37□□□□□ -0.91
DDX55-202ENST00000354291 SEC11CQ9BY50 192 aa9.36□□□□□ -0.91
DDX55-202ENST00000354291 COX19Q49B96 90 aa9.35□□□□□ -0.91
DDX55-202ENST00000354291 F8VRH5 84 aa9.34□□□□□ -0.91
DDX55-202ENST00000354291 IFITM2Q01629 132 aa9.34□□□□□ -0.91
DDX55-202ENST00000354291 LINC01546A6NGU7 62 aa9.33□□□□□ -0.92
DDX55-202ENST00000354291 CXCL5P42830 114 aa9.33□□□□□ -0.92
DDX55-202ENST00000354291 LINC00469Q8N7U9 141 aa9.33□□□□□ -0.92
DDX55-202ENST00000354291 RETNLBQ9BQ08 111 aa9.33□□□□□ -0.92
DDX55-202ENST00000354291 TINCRA0A1B0GVN0 87 aa9.32□□□□□ -0.92
DDX55-202ENST00000354291 LINC01547P58512 204 aaPredicted RBP9.32□□□□□ -0.92
DDX55-202ENST00000354291 LBHQ53QV2 105 aaPredicted RBP9.31□□□□□ -0.92
DDX55-202ENST00000354291 PDZD11Q5EBL8 140 aa9.31□□□□□ -0.92
DDX55-202ENST00000354291 XAGE1AQ9HD64 81 aa9.31□□□□□ -0.92
DDX55-202ENST00000354291 C22orf24Q9Y442 160 aa9.31□□□□□ -0.92
DDX55-202ENST00000354291 SMIM1B2RUZ4 78 aa9.3□□□□□ -0.92
DDX55-202ENST00000354291 FA2HQ7L5A8 372 aa9.3□□□□□ -0.92
DDX55-202ENST00000354291 CST9LQ9H4G1 147 aa9.3□□□□□ -0.92
DDX55-202ENST00000354291 IGLV5-45A0A087WSX0 123 aa9.29□□□□□ -0.92
DDX55-202ENST00000354291 FABP9Q0Z7S8 132 aa9.29□□□□□ -0.92
DDX55-202ENST00000354291 COX7B2Q8TF08 81 aa9.29□□□□□ -0.92
DDX55-202ENST00000354291 SMCO4Q9NRQ5 59 aa9.29□□□□□ -0.92
DDX55-202ENST00000354291 NUPR1O60356 82 aa9.28□□□□□ -0.92
DDX55-202ENST00000354291 PMVKQ15126 192 aa9.28□□□□□ -0.92
DDX55-202ENST00000354291 COMMD7Q86VX2 200 aa9.28□□□□□ -0.92
DDX55-202ENST00000354291 TYMSOSQ8TAI1 123 aa9.28□□□□□ -0.92
DDX55-202ENST00000354291 MRPL18Q9H0U6 180 aaKnown RBP9.28□□□□□ -0.92
DDX55-202ENST00000354291 TP73-AS1Q9UF72 201 aa9.28□□□□□ -0.92
DDX55-202ENST00000354291 RHEBQ15382 184 aa9.27□□□□□ -0.93
DDX55-202ENST00000354291 C10orf91Q5T1B1 145 aa9.27□□□□□ -0.93
DDX55-202ENST00000354291 RPS10P5Q9NQ39 176 aa9.27□□□□□ -0.93
DDX55-202ENST00000354291 A0A087X002 238 aa9.26□□□□□ -0.93
DDX55-202ENST00000354291 ZNF861PO60384 105 aa9.26□□□□□ -0.93
DDX55-202ENST00000354291 MRPL55Q7Z7F7 128 aaKnown RBP9.26□□□□□ -0.93
DDX55-202ENST00000354291 IGLV7-46A0A075B6I9 117 aa9.25□□□□□ -0.93
DDX55-202ENST00000354291 H3BRM9 83 aa9.25□□□□□ -0.93
DDX55-202ENST00000354291 TPRXLQ17RH7 258 aa9.25□□□□□ -0.93
DDX55-202ENST00000354291 SPINK8P0C7L1 97 aa9.24□□□□□ -0.93
DDX55-202ENST00000354291 CRYGAP11844 174 aa9.24□□□□□ -0.93
DDX55-202ENST00000354291 RAB5BP61020 215 aa9.22□□□□□ -0.93
DDX55-202ENST00000354291 ATP5LO75964 103 aa9.21□□□□□ -0.94
DDX55-202ENST00000354291 LINC00614P0C842 121 aa9.21□□□□□ -0.94
DDX55-202ENST00000354291 RPL28P46779 137 aaKnown RBP9.21□□□□□ -0.94
DDX55-202ENST00000354291 NDUFA6P56556 154 aa9.21□□□□□ -0.94
DDX55-202ENST00000354291 LINC00167Q96N53 147 aa9.21□□□□□ -0.94
DDX55-202ENST00000354291 TRAPPC1Q9Y5R8 145 aa9.21□□□□□ -0.94
DDX55-202ENST00000354291 BCE1O60756 84 aa9.2□□□□□ -0.94
DDX55-202ENST00000354291 IGLC3P0DOY3 106 aa9.2□□□□□ -0.94
DDX55-202ENST00000354291 ANAPC11Q9NYG5 84 aa9.2□□□□□ -0.94
DDX55-202ENST00000354291 IGLV5-37A0A075B6J1 123 aa9.19□□□□□ -0.94
DDX55-202ENST00000354291 RPL37AP8A6NKH3 93 aa9.19□□□□□ -0.94
DDX55-202ENST00000354291 NKAPP1Q8N9T2 125 aa9.19□□□□□ -0.94
DDX55-202ENST00000354291 C18orf32Q8TCD1 76 aa9.19□□□□□ -0.94
DDX55-202ENST00000354291 A0A096LNJ9 63 aa9.18□□□□□ -0.94
DDX55-202ENST00000354291 IGLV5-39A0A0G2JS06 123 aa9.18□□□□□ -0.94
DDX55-202ENST00000354291 HBDP02042 147 aa9.18□□□□□ -0.94
DDX55-202ENST00000354291 URB1-AS1Q96HZ7 61 aa9.17□□□□□ -0.94
DDX55-202ENST00000354291 GAGE10A6NGK3 116 aa9.16□□□□□ -0.94
DDX55-202ENST00000354291 APOC3P02656 99 aa9.16□□□□□ -0.94
DDX55-202ENST00000354291 ZNF22P17026 224 aaPredicted RBP9.16□□□□□ -0.94
DDX55-202ENST00000354291 PFN2P35080 140 aa9.16□□□□□ -0.94
DDX55-202ENST00000354291 PPDPFQ9H3Y8 114 aa9.16□□□□□ -0.94
DDX55-202ENST00000354291 SNAPINO95295 136 aa9.15□□□□□ -0.94
DDX55-202ENST00000354291 COX17Q14061 63 aa9.15□□□□□ -0.94
DDX55-202ENST00000354291 PMCHL1Q16048 86 aa9.15□□□□□ -0.94
DDX55-202ENST00000354291 NDUFA5Q16718 116 aa9.15□□□□□ -0.94
DDX55-202ENST00000354291 LINC00304Q8N9R0 145 aa9.15□□□□□ -0.94
DDX55-202ENST00000354291 KRTAP13-2Q52LG2 175 aa9.14□□□□□ -0.95
DDX55-202ENST00000354291 SFTA2Q6UW10 78 aa9.14□□□□□ -0.95
DDX55-202ENST00000354291 BAGE3Q86Y29 109 aa9.14□□□□□ -0.95
DDX55-202ENST00000354291 SVBPQ8N300 66 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms