RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 IGLL5B9A064 214 aa5.64□□□□□ -1.51
CD44-205ENST00000352818 F5H768 121 aa5.64□□□□□ -1.51
CD44-205ENST00000352818 K7ERJ3 54 aa5.64□□□□□ -1.51
CD44-205ENST00000352818 PAX4O43316 350 aa5.64□□□□□ -1.51
CD44-205ENST00000352818 SPINK8P0C7L1 97 aa5.64□□□□□ -1.51
CD44-205ENST00000352818 FABP2P12104 132 aa5.64□□□□□ -1.51
CD44-205ENST00000352818 NANOS2P60321 138 aaKnown RBP5.64□□□□□ -1.51
CD44-205ENST00000352818 Q6ZR54 194 aa5.64□□□□□ -1.51
CD44-205ENST00000352818 SH2D6Q7Z4S9 175 aa5.64□□□□□ -1.51
CD44-205ENST00000352818 RAB37Q96AX2 223 aa5.64□□□□□ -1.51
CD44-205ENST00000352818 LITAFQ99732 161 aa5.64□□□□□ -1.51
CD44-205ENST00000352818 PKHD1L1Q86WI1 4243 aa5.64□□□□□ -1.51
CD44-205ENST00000352818 IGHV3-64A0A075B6Q5 118 aa5.63□□□□□ -1.51
CD44-205ENST00000352818 TRAV13-1A0A0B4J241 112 aa5.63□□□□□ -1.51
CD44-205ENST00000352818 GAGE10A6NGK3 116 aa5.63□□□□□ -1.51
CD44-205ENST00000352818 J3QL48 77 aa5.63□□□□□ -1.51
CD44-205ENST00000352818 RPL24P83731 157 aaKnown RBP5.63□□□□□ -1.51
CD44-205ENST00000352818 COX6A2Q02221 97 aa5.63□□□□□ -1.51
CD44-205ENST00000352818 TNP2Q05952 138 aa5.63□□□□□ -1.51
CD44-205ENST00000352818 GAGE6Q13070 117 aa5.63□□□□□ -1.51
CD44-205ENST00000352818 CHCHD5Q9BSY4 110 aa5.63□□□□□ -1.51
CD44-205ENST00000352818 C11orf68Q9H3H3 251 aaKnown RBP5.63□□□□□ -1.51
CD44-205ENST00000352818 PPDPFQ9H3Y8 114 aa5.63□□□□□ -1.51
CD44-205ENST00000352818 CELA1Q9UNI1 258 aa5.63□□□□□ -1.51
CD44-205ENST00000352818 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.62□□□□□ -1.51
CD44-205ENST00000352818 A0A0B4J2C4 111 aa5.62□□□□□ -1.51
CD44-205ENST00000352818 IFITM1P13164 125 aa5.62□□□□□ -1.51
CD44-205ENST00000352818 SERTAD4-AS1Q5TG53 156 aa5.62□□□□□ -1.51
CD44-205ENST00000352818 LINC01561Q8N1V8 128 aa5.62□□□□□ -1.51
CD44-205ENST00000352818 SPCS1Q9Y6A9 102 aa5.62□□□□□ -1.51
CD44-205ENST00000352818 FAT3Q8TDW7 4589 aa5.62□□□□□ -1.51
CD44-205ENST00000352818 IGLV4-60A0A075B6I1 120 aa5.61□□□□□ -1.51
CD44-205ENST00000352818 H3BNG1 76 aa5.61□□□□□ -1.51
CD44-205ENST00000352818 HERV-K104P63124 156 aa5.61□□□□□ -1.51
CD44-205ENST00000352818 MRPL23Q16540 153 aaKnown RBP5.61□□□□□ -1.51
CD44-205ENST00000352818 MIAQ16674 131 aa5.61□□□□□ -1.51
CD44-205ENST00000352818 LYRM7Q5U5X0 104 aa5.61□□□□□ -1.51
CD44-205ENST00000352818 Q5VSD8 79 aa5.61□□□□□ -1.51
CD44-205ENST00000352818 ZNF625Q96I27 306 aaPredicted RBP5.61□□□□□ -1.51
CD44-205ENST00000352818 IGHV3OR16-9A0A0B4J2B5 98 aa5.6□□□□□ -1.51
CD44-205ENST00000352818 DEFB4AO15263 64 aa5.6□□□□□ -1.51
CD44-205ENST00000352818 CFC1BP0CG36 223 aa5.6□□□□□ -1.51
CD44-205ENST00000352818 CFC1P0CG37 223 aa5.6□□□□□ -1.51
CD44-205ENST00000352818 RBX1P62877 108 aa5.6□□□□□ -1.51
CD44-205ENST00000352818 SFTA2Q6UW10 78 aa5.6□□□□□ -1.51
CD44-205ENST00000352818 COPS9Q8WXC6 57 aa5.6□□□□□ -1.51
CD44-205ENST00000352818 PGPEP1Q9NXJ5 209 aa5.6□□□□□ -1.51
CD44-205ENST00000352818 PLA2G2DQ9UNK4 145 aa5.6□□□□□ -1.51
CD44-205ENST00000352818 ICOSQ9Y6W8 199 aa5.6□□□□□ -1.51
CD44-205ENST00000352818 FAT4Q6V0I7 4981 aa5.59□□□□□ -1.51
CD44-205ENST00000352818 A0A087WZ39 114 aa5.59□□□□□ -1.51
CD44-205ENST00000352818 LINC00959A0A1B0GUT2 108 aa5.59□□□□□ -1.51
CD44-205ENST00000352818 A4D1N5 150 aa5.59□□□□□ -1.51
CD44-205ENST00000352818 TSPAN13O95857 204 aa5.59□□□□□ -1.51
CD44-205ENST00000352818 CIRBPQ14011 172 aaKnown RBP5.59□□□□□ -1.51
CD44-205ENST00000352818 LELP1Q5T871 98 aa5.59□□□□□ -1.51
CD44-205ENST00000352818 MUSTN1Q8IVN3 82 aa5.59□□□□□ -1.51
CD44-205ENST00000352818 NAA38Q9BRA0 125 aaKnown RBP5.59□□□□□ -1.51
CD44-205ENST00000352818 SS18Q15532 418 aa5.58□□□□□ -1.52
CD44-205ENST00000352818 COX7B2Q8TF08 81 aa5.58□□□□□ -1.52
CD44-205ENST00000352818 Q9H8V8 135 aa5.58□□□□□ -1.52
CD44-205ENST00000352818 PRO1854Q9UHT4 67 aa5.58□□□□□ -1.52
CD44-205ENST00000352818 A0A096LPF7 62 aa5.57□□□□□ -1.52
CD44-205ENST00000352818 APOMO95445 188 aa5.57□□□□□ -1.52
CD44-205ENST00000352818 XGP55808 180 aa5.57□□□□□ -1.52
CD44-205ENST00000352818 ADAMTSL4-AS1Q5T5F5 129 aa5.57□□□□□ -1.52
CD44-205ENST00000352818 MUC2Q02817 5179 aa5.57□□□□□ -1.52
CD44-205ENST00000352818 KRTAP29-1A8MX34 341 aaPredicted RBP5.56□□□□□ -1.52
CD44-205ENST00000352818 EIF4EBP3O60516 100 aaPredicted RBP5.56□□□□□ -1.52
CD44-205ENST00000352818 IGHV3-33P01772 117 aa5.56□□□□□ -1.52
CD44-205ENST00000352818 KRTAP10-2P60368 255 aa5.56□□□□□ -1.52
CD44-205ENST00000352818 TRBV20-1A0A075B6N2 111 aa5.55□□□□□ -1.52
CD44-205ENST00000352818 TMEM262E9PQX1 116 aa5.55□□□□□ -1.52
CD44-205ENST00000352818 CD164L2Q6UWJ8 174 aa5.55□□□□□ -1.52
CD44-205ENST00000352818 Q8IZM0 81 aa5.55□□□□□ -1.52
CD44-205ENST00000352818 C11orf45Q8TAV5 145 aa5.55□□□□□ -1.52
CD44-205ENST00000352818 ERG28Q9UKR5 140 aa5.55□□□□□ -1.52
CD44-205ENST00000352818 IGKV3OR2-268A0A0C4DH90 116 aa5.54□□□□□ -1.52
CD44-205ENST00000352818 TRBV30A0A0K0K1B3 111 aa5.54□□□□□ -1.52
CD44-205ENST00000352818 IBA57-AS1B1ANH7 110 aa5.54□□□□□ -1.52
CD44-205ENST00000352818 F8W1H4 67 aa5.54□□□□□ -1.52
CD44-205ENST00000352818 PRSS2P07478 247 aa5.54□□□□□ -1.52
CD44-205ENST00000352818 HTN3P15516 51 aa5.54□□□□□ -1.52
CD44-205ENST00000352818 C1orf134Q5TEV5 83 aa5.54□□□□□ -1.52
CD44-205ENST00000352818 LINC00308Q8TCZ7 52 aa5.54□□□□□ -1.52
CD44-205ENST00000352818 PRR34Q9NV39 138 aa5.54□□□□□ -1.52
CD44-205ENST00000352818 PRO0461Q9UI25 63 aa5.54□□□□□ -1.52
CD44-205ENST00000352818 ANGP03950 147 aaKnown RBP5.53□□□□□ -1.52
CD44-205ENST00000352818 CXCL5P42830 114 aa5.53□□□□□ -1.52
CD44-205ENST00000352818 PCP4P48539 62 aa5.53□□□□□ -1.52
CD44-205ENST00000352818 REG3AQ06141 175 aa5.53□□□□□ -1.52
CD44-205ENST00000352818 MEIG1Q5JSS6 88 aa5.53□□□□□ -1.52
CD44-205ENST00000352818 LYPD5Q6UWN5 251 aa5.53□□□□□ -1.52
CD44-205ENST00000352818 Q6ZTC4 211 aa5.53□□□□□ -1.52
CD44-205ENST00000352818 LINC00269Q8N2A0 174 aa5.53□□□□□ -1.52
CD44-205ENST00000352818 TNXBP22105 4242 aa5.52□□□□□ -1.53
CD44-205ENST00000352818 LOC107984156A0A0G2JMH3 177 aa5.52□□□□□ -1.53
CD44-205ENST00000352818 H3BMG7 143 aa5.52□□□□□ -1.53
CD44-205ENST00000352818 COX7A2LO14548 114 aa5.52□□□□□ -1.53
CD44-205ENST00000352818 XCL1P47992 114 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms