RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 GYPEP15421 78 aa17■□□□□ 0.31
CPNE1-202ENST00000352393 C6orf226Q5I0X4 101 aa17■□□□□ 0.31
CPNE1-202ENST00000352393 A0A1B0GUV1 79 aa17■□□□□ 0.31
CPNE1-202ENST00000352393 C11orf68Q9H3H3 251 aaKnown RBP17■□□□□ 0.31
CPNE1-202ENST00000352393 XCL1P47992 114 aa16.99■□□□□ 0.31
CPNE1-202ENST00000352393 Q8IZM0 81 aa16.99■□□□□ 0.31
CPNE1-202ENST00000352393 LECT2O14960 151 aa16.99■□□□□ 0.31
CPNE1-202ENST00000352393 ATP5G1P05496 136 aa16.99■□□□□ 0.31
CPNE1-202ENST00000352393 SS18Q15532 418 aa16.98■□□□□ 0.31
CPNE1-202ENST00000352393 OR13C6PQ8NH95 151 aa16.97■□□□□ 0.31
CPNE1-202ENST00000352393 C14orf132Q9NPU4 83 aa16.96■□□□□ 0.31
CPNE1-202ENST00000352393 LINC01561Q8N1V8 128 aa16.96■□□□□ 0.3
CPNE1-202ENST00000352393 ANK3Q12955 4377 aaKnown RBP16.95■□□□□ 0.3
CPNE1-202ENST00000352393 SVIPQ8NHG7 77 aa16.94■□□□□ 0.3
CPNE1-202ENST00000352393 KLK5Q9Y337 293 aaPredicted RBP16.94■□□□□ 0.3
CPNE1-202ENST00000352393 X6R8D5 127 aa16.94■□□□□ 0.3
CPNE1-202ENST00000352393 TENM4Q6N022 2769 aa16.94■□□□□ 0.3
CPNE1-202ENST00000352393 CLPSL2Q6UWE3 100 aa16.92■□□□□ 0.3
CPNE1-202ENST00000352393 HILS1P60008 231 aa16.91■□□□□ 0.3
CPNE1-202ENST00000352393 PRO0255Q9UI72 69 aa16.91■□□□□ 0.3
CPNE1-202ENST00000352393 J3QKU1 62 aa16.88■□□□□ 0.29
CPNE1-202ENST00000352393 SLPIP03973 132 aa16.88■□□□□ 0.29
CPNE1-202ENST00000352393 HIST1H4AP62805 103 aaKnown RBP16.88■□□□□ 0.29
CPNE1-202ENST00000352393 LINC00167Q96N53 147 aa16.88■□□□□ 0.29
CPNE1-202ENST00000352393 NCR3O14931 201 aa16.88■□□□□ 0.29
CPNE1-202ENST00000352393 NANOS2P60321 138 aaKnown RBP16.88■□□□□ 0.29
CPNE1-202ENST00000352393 ORMDL1Q9P0S3 153 aa16.88■□□□□ 0.29
CPNE1-202ENST00000352393 MTORP42345 2549 aa16.87■□□□□ 0.29
CPNE1-202ENST00000352393 SMIM9A6NGZ8 99 aa16.87■□□□□ 0.29
CPNE1-202ENST00000352393 KIAA0087Q14695 138 aa16.87■□□□□ 0.29
CPNE1-202ENST00000352393 PDZD2O15018 2839 aa16.87■□□□□ 0.29
CPNE1-202ENST00000352393 A0A096LPF7 62 aa16.87■□□□□ 0.29
CPNE1-202ENST00000352393 C3orf22Q8N5N4 141 aa16.87■□□□□ 0.29
CPNE1-202ENST00000352393 LINC00482Q8N8I6 264 aa16.87■□□□□ 0.29
CPNE1-202ENST00000352393 ACANP16112 2415 aa16.86■□□□□ 0.29
CPNE1-202ENST00000352393 KRTAP10-3P60369 221 aa16.86■□□□□ 0.29
CPNE1-202ENST00000352393 TMEM126AQ9H061 195 aa16.86■□□□□ 0.29
CPNE1-202ENST00000352393 Q6JHZ5 121 aa16.85■□□□□ 0.29
CPNE1-202ENST00000352393 LINC00846Q9NV44 126 aa16.85■□□□□ 0.29
CPNE1-202ENST00000352393 UQCRQO14949 82 aa16.84■□□□□ 0.29
CPNE1-202ENST00000352393 NDUFC2O95298 119 aa16.84■□□□□ 0.29
CPNE1-202ENST00000352393 CD164L2Q6UWJ8 174 aa16.84■□□□□ 0.29
CPNE1-202ENST00000352393 FN1P02751 2386 aaKnown RBP16.84■□□□□ 0.29
CPNE1-202ENST00000352393 A0A1B0GX51 115 aa16.84■□□□□ 0.29
CPNE1-202ENST00000352393 C3orf56Q8N813 242 aa16.84■□□□□ 0.29
CPNE1-202ENST00000352393 COX17Q14061 63 aa16.83■□□□□ 0.28
CPNE1-202ENST00000352393 LINC00269Q8N2A0 174 aa16.83■□□□□ 0.28
CPNE1-202ENST00000352393 PRR3P79522 188 aaKnown RBP16.82■□□□□ 0.28
CPNE1-202ENST00000352393 LYRM9A8MSI8 78 aa16.81■□□□□ 0.28
CPNE1-202ENST00000352393 C9orf153Q5TBE3 101 aa16.81■□□□□ 0.28
CPNE1-202ENST00000352393 LINC00526Q96FQ7 95 aa16.81■□□□□ 0.28
CPNE1-202ENST00000352393 SMIM20Q8N5G0 67 aa16.81■□□□□ 0.28
CPNE1-202ENST00000352393 CHCHD10Q8WYQ3 142 aaPredicted RBP16.81■□□□□ 0.28
CPNE1-202ENST00000352393 CFAP161Q6P656 301 aa16.8■□□□□ 0.28
CPNE1-202ENST00000352393 IGHV4-28A0A0C4DH34 117 aa16.79■□□□□ 0.28
CPNE1-202ENST00000352393 Q8N814 137 aa16.79■□□□□ 0.28
CPNE1-202ENST00000352393 GCN1Q92616 2671 aaKnown RBP16.78■□□□□ 0.28
CPNE1-202ENST00000352393 Q8N3U1 123 aa16.78■□□□□ 0.28
CPNE1-202ENST00000352393 ATOX1O00244 68 aa16.78■□□□□ 0.28
CPNE1-202ENST00000352393 C2orf48Q96LS8 159 aa16.78■□□□□ 0.28
CPNE1-202ENST00000352393 IGKV3D-7A0A0C4DH55 119 aa16.77■□□□□ 0.28
CPNE1-202ENST00000352393 COX7CP15954 63 aa16.77■□□□□ 0.28
CPNE1-202ENST00000352393 CCKP06307 115 aa16.76■□□□□ 0.27
CPNE1-202ENST00000352393 REG3AQ06141 175 aa16.76■□□□□ 0.27
CPNE1-202ENST00000352393 IGLV10-54A0A075B6I4 117 aa16.75■□□□□ 0.27
CPNE1-202ENST00000352393 ANGP03950 147 aaKnown RBP16.75■□□□□ 0.27
CPNE1-202ENST00000352393 C9orf116Q5BN46 136 aaPredicted RBP16.74■□□□□ 0.27
CPNE1-202ENST00000352393 JMJD7-PLA2G4BH0Y9G9 81 aa16.73■□□□□ 0.27
CPNE1-202ENST00000352393 RPL18AQ02543 176 aaKnown RBP16.73■□□□□ 0.27
CPNE1-202ENST00000352393 Q8NDZ9 215 aa16.73■□□□□ 0.27
CPNE1-202ENST00000352393 TMEM256-PLSCR3K7ERE1 68 aa16.71■□□□□ 0.27
CPNE1-202ENST00000352393 DEFB4AO15263 64 aa16.71■□□□□ 0.27
CPNE1-202ENST00000352393 DEFB135Q30KP9 77 aa16.71■□□□□ 0.27
CPNE1-202ENST00000352393 SPATA3Q8NHX4 192 aa16.7■□□□□ 0.26
CPNE1-202ENST00000352393 ITPR2Q14571 2701 aa16.69■□□□□ 0.26
CPNE1-202ENST00000352393 C6orf99Q4VX62 202 aa16.68■□□□□ 0.26
CPNE1-202ENST00000352393 CRYGAP11844 174 aa16.67■□□□□ 0.26
CPNE1-202ENST00000352393 HELZ2Q9BYK8 2649 aaKnown RBP16.67■□□□□ 0.26
CPNE1-202ENST00000352393 NBEAL2Q6ZNJ1 2754 aa16.67■□□□□ 0.26
CPNE1-202ENST00000352393 UNC79Q9P2D8 2635 aa16.67■□□□□ 0.26
CPNE1-202ENST00000352393 A0A087WVE0 104 aa16.67■□□□□ 0.26
CPNE1-202ENST00000352393 DAD1P61803 113 aa16.67■□□□□ 0.26
CPNE1-202ENST00000352393 C9orf66Q5T8R8 295 aa16.66■□□□□ 0.26
CPNE1-202ENST00000352393 MUC7Q8TAX7 377 aa16.64■□□□□ 0.25
CPNE1-202ENST00000352393 SMR3AQ99954 134 aa16.64■□□□□ 0.25
CPNE1-202ENST00000352393 SPAG11BQ08648 103 aa16.64■□□□□ 0.25
CPNE1-202ENST00000352393 S100A7L2Q5SY68 101 aa16.64■□□□□ 0.25
CPNE1-202ENST00000352393 C10orf25Q5T742 122 aa16.64■□□□□ 0.25
CPNE1-202ENST00000352393 CELA1Q9UNI1 258 aa16.64■□□□□ 0.25
CPNE1-202ENST00000352393 LINC00575Q6W349 94 aa16.63■□□□□ 0.25
CPNE1-202ENST00000352393 APOC4P55056 127 aa16.63■□□□□ 0.25
CPNE1-202ENST00000352393 C6orf223Q8N319 242 aa16.63■□□□□ 0.25
CPNE1-202ENST00000352393 UNQ6190/PRO20217Q6UXQ8 127 aa16.62■□□□□ 0.25
CPNE1-202ENST00000352393 ATP5EP2Q5VTU8 51 aa16.61■□□□□ 0.25
CPNE1-202ENST00000352393 Q8NAQ8 132 aa16.61■□□□□ 0.25
CPNE1-202ENST00000352393 A0A0J9YWU9 116 aa16.6■□□□□ 0.25
CPNE1-202ENST00000352393 USP17L23D6RBM5 183 aa16.6■□□□□ 0.25
CPNE1-202ENST00000352393 IGHV4-30-4P0DP06 118 aa16.6■□□□□ 0.25
CPNE1-202ENST00000352393 LELP1Q5T871 98 aa16.6■□□□□ 0.25
CPNE1-202ENST00000352393 SERP2Q8N6R1 65 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms