RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 LINC00337Q8N6G1 96 aa16.34■□□□□ 0.21
NPAS3-201ENST00000346562 Q6ZRU5 148 aa16.33■□□□□ 0.21
NPAS3-201ENST00000346562 C1orf195Q5TG92 126 aa16.33■□□□□ 0.2
NPAS3-201ENST00000346562 HCG22E2RYF7 251 aa16.32■□□□□ 0.2
NPAS3-201ENST00000346562 Q8N3U1 123 aa16.32■□□□□ 0.2
NPAS3-201ENST00000346562 URB1-AS1Q96HZ7 61 aa16.32■□□□□ 0.2
NPAS3-201ENST00000346562 ANKHD1Q8IWZ3 2542 aaKnown RBP16.31■□□□□ 0.2
NPAS3-201ENST00000346562 A0A087WVE0 104 aa16.31■□□□□ 0.2
NPAS3-201ENST00000346562 SBSPONQ8IVN8 264 aa16.3■□□□□ 0.2
NPAS3-201ENST00000346562 PRLHP81277 87 aa16.29■□□□□ 0.2
NPAS3-201ENST00000346562 C10orf142B7Z368 130 aa16.28■□□□□ 0.2
NPAS3-201ENST00000346562 C22orf24Q9Y442 160 aa16.28■□□□□ 0.2
NPAS3-201ENST00000346562 A0A1W2PPR1 153 aa16.28■□□□□ 0.2
NPAS3-201ENST00000346562 DEFB116Q30KQ4 102 aa16.27■□□□□ 0.2
NPAS3-201ENST00000346562 SMCR5Q8TEV8 140 aa16.27■□□□□ 0.2
NPAS3-201ENST00000346562 SOSTDC1Q6X4U4 206 aa16.26■□□□□ 0.19
NPAS3-201ENST00000346562 PCDH15Q96QU1 1955 aa16.25■□□□□ 0.19
NPAS3-201ENST00000346562 MDFIQ99750 246 aa16.25■□□□□ 0.19
NPAS3-201ENST00000346562 OTOGLQ3ZCN5 2332 aa16.25■□□□□ 0.19
NPAS3-201ENST00000346562 PCNX3Q9H6A9 2034 aa16.22■□□□□ 0.19
NPAS3-201ENST00000346562 hDV103S1A0JD37 113 aa16.22■□□□□ 0.19
NPAS3-201ENST00000346562 LRP4O75096 1905 aa16.22■□□□□ 0.19
NPAS3-201ENST00000346562 LINC00310P59036 64 aa16.21■□□□□ 0.19
NPAS3-201ENST00000346562 PMAIP1Q13794 54 aa16.2■□□□□ 0.18
NPAS3-201ENST00000346562 ATG2AQ2TAZ0 1938 aa16.2■□□□□ 0.18
NPAS3-201ENST00000346562 C7orf65Q6ZTY9 151 aa16.17■□□□□ 0.18
NPAS3-201ENST00000346562 RAI1Q7Z5J4 1906 aaPredicted RBP16.16■□□□□ 0.18
NPAS3-201ENST00000346562 IGKV2D-30A0A075B6S6 120 aa16.16■□□□□ 0.18
NPAS3-201ENST00000346562 IGKV2-30P06310 120 aa16.16■□□□□ 0.18
NPAS3-201ENST00000346562 CXCL6P80162 114 aa16.15■□□□□ 0.18
NPAS3-201ENST00000346562 COL5A1P20908 1838 aaPredicted RBP16.15■□□□□ 0.18
NPAS3-201ENST00000346562 A8MTW9 85 aa16.15■□□□□ 0.18
NPAS3-201ENST00000346562 CRYGAP11844 174 aa16.14■□□□□ 0.17
NPAS3-201ENST00000346562 TMEM254Q8TBM7 123 aa16.14■□□□□ 0.17
NPAS3-201ENST00000346562 C1orf64Q8NEQ6 169 aa16.14■□□□□ 0.17
NPAS3-201ENST00000346562 PRR14LQ5THK1 2151 aa16.13■□□□□ 0.17
NPAS3-201ENST00000346562 ACACBO00763 2458 aa16.12■□□□□ 0.17
NPAS3-201ENST00000346562 C11orf72Q8NBR9 251 aa16.12■□□□□ 0.17
NPAS3-201ENST00000346562 PSPHP1O15172 72 aa16.11■□□□□ 0.17
NPAS3-201ENST00000346562 TANC2Q9HCD6 1990 aa16.11■□□□□ 0.17
NPAS3-201ENST00000346562 SPACA4Q8TDM5 124 aa16.11■□□□□ 0.17
NPAS3-201ENST00000346562 KIAA0087Q14695 138 aa16.1■□□□□ 0.17
NPAS3-201ENST00000346562 A0A096LNJ9 63 aa16.1■□□□□ 0.17
NPAS3-201ENST00000346562 CUL9Q8IWT3 2517 aa16.09■□□□□ 0.17
NPAS3-201ENST00000346562 FAM229AH3BQW9 127 aa16.08■□□□□ 0.17
NPAS3-201ENST00000346562 TP53AIP1Q9HCN2 124 aa16.08■□□□□ 0.16
NPAS3-201ENST00000346562 MOBPQ13875 183 aa16.08■□□□□ 0.16
NPAS3-201ENST00000346562 HCFC1P51610 2035 aa16.07■□□□□ 0.16
NPAS3-201ENST00000346562 LINC00846Q9NV44 126 aa16.07■□□□□ 0.16
NPAS3-201ENST00000346562 H3BNG1 76 aa16.06■□□□□ 0.16
NPAS3-201ENST00000346562 IGLV5-39A0A0G2JS06 123 aa16.06■□□□□ 0.16
NPAS3-201ENST00000346562 LINC00167Q96N53 147 aa16.05■□□□□ 0.16
NPAS3-201ENST00000346562 KIF25-AS1Q9Y6Z4 181 aa16.04■□□□□ 0.16
NPAS3-201ENST00000346562 SORL1Q92673 2214 aa16.02■□□□□ 0.16
NPAS3-201ENST00000346562 SMIM29Q86T20 159 aa16.02■□□□□ 0.16
NPAS3-201ENST00000346562 WNK1Q9H4A3 2382 aa16.01■□□□□ 0.15
NPAS3-201ENST00000346562 CSPG4Q6UVK1 2322 aa16.01■□□□□ 0.15
NPAS3-201ENST00000346562 ADAMTS20P59510 1910 aa16■□□□□ 0.15
NPAS3-201ENST00000346562 NOTCH2Q04721 2471 aa16■□□□□ 0.15
NPAS3-201ENST00000346562 SPATA3Q8NHX4 192 aa15.99■□□□□ 0.15
NPAS3-201ENST00000346562 C6orf48Q9UBA6 75 aa15.99■□□□□ 0.15
NPAS3-201ENST00000346562 LINC01546A6NGU7 62 aa15.99■□□□□ 0.15
NPAS3-201ENST00000346562 ACYP2P14621 99 aa15.99■□□□□ 0.15
NPAS3-201ENST00000346562 SPG11Q96JI7 2443 aa15.98■□□□□ 0.15
NPAS3-201ENST00000346562 BDP1A6H8Y1 2624 aa15.98■□□□□ 0.15
NPAS3-201ENST00000346562 A0A1B0GU69 56 aa15.98■□□□□ 0.15
NPAS3-201ENST00000346562 RTL8CO15255 209 aa15.98■□□□□ 0.15
NPAS3-201ENST00000346562 IGHV3OR16-9A0A0B4J2B5 98 aa15.97■□□□□ 0.15
NPAS3-201ENST00000346562 Q8NBF4 154 aa15.97■□□□□ 0.15
NPAS3-201ENST00000346562 PRRC2AP48634 2157 aaKnown RBP15.97■□□□□ 0.15
NPAS3-201ENST00000346562 PTPN13Q12923 2485 aa15.97■□□□□ 0.15
NPAS3-201ENST00000346562 A0A1B0GW54 56 aa15.96■□□□□ 0.15
NPAS3-201ENST00000346562 PTPRSQ13332 1948 aa15.95■□□□□ 0.14
NPAS3-201ENST00000346562 FAM19A4Q96LR4 140 aa15.95■□□□□ 0.14
NPAS3-201ENST00000346562 Q6ZRP5 223 aa15.94■□□□□ 0.14
NPAS3-201ENST00000346562 CPAMD8Q8IZJ3 1885 aa15.94■□□□□ 0.14
NPAS3-201ENST00000346562 NAV3Q8IVL0 2385 aa15.94■□□□□ 0.14
NPAS3-201ENST00000346562 EXPH5Q8NEV8 1989 aa15.93■□□□□ 0.14
NPAS3-201ENST00000346562 LINC00315P59091 139 aa15.93■□□□□ 0.14
NPAS3-201ENST00000346562 ELOF1P60002 83 aaKnown RBP15.93■□□□□ 0.14
NPAS3-201ENST00000346562 TYMSOSQ8TAI1 123 aa15.92■□□□□ 0.14
NPAS3-201ENST00000346562 NBDYA0A0U1RRE5 68 aa15.91■□□□□ 0.14
NPAS3-201ENST00000346562 HIVEP3Q5T1R4 2406 aa15.91■□□□□ 0.14
NPAS3-201ENST00000346562 PHF5AQ7RTV0 110 aaKnown RBP15.91■□□□□ 0.14
NPAS3-201ENST00000346562 EML5Q05BV3 1969 aa15.9■□□□□ 0.14
NPAS3-201ENST00000346562 Q9UF83 564 aa15.89■□□□□ 0.13
NPAS3-201ENST00000346562 C16orf90A8MZG2 172 aa15.89■□□□□ 0.13
NPAS3-201ENST00000346562 LINC00313P59037 77 aa15.89■□□□□ 0.13
NPAS3-201ENST00000346562 NAV2Q8IVL1 2488 aa15.87■□□□□ 0.13
NPAS3-201ENST00000346562 KRTAP24-1Q3LI83 254 aa15.86■□□□□ 0.13
NPAS3-201ENST00000346562 Q6ZRX8 168 aa15.86■□□□□ 0.13
NPAS3-201ENST00000346562 SONP18583 2426 aaKnown RBP15.85■□□□□ 0.13
NPAS3-201ENST00000346562 TTC28Q96AY4 2481 aa15.85■□□□□ 0.13
NPAS3-201ENST00000346562 IGLV5-45A0A087WSX0 123 aa15.85■□□□□ 0.13
NPAS3-201ENST00000346562 EPM2AB3EWF7 344 aa15.84■□□□□ 0.13
NPAS3-201ENST00000346562 H3BPC8 53 aa15.84■□□□□ 0.13
NPAS3-201ENST00000346562 PLA2G1BP04054 148 aaKnown RBP15.84■□□□□ 0.13
NPAS3-201ENST00000346562 ATRXP46100 2492 aa15.84■□□□□ 0.13
NPAS3-201ENST00000346562 ARHGAP32A7KAX9 2087 aa15.83■□□□□ 0.13
NPAS3-201ENST00000346562 LINC00476Q8WZB0 136 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms