RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 PRO0255Q9UI72 69 aa9.89□□□□□ -0.83
TRIO-202ENST00000344204 GCN1Q92616 2671 aaKnown RBP9.89□□□□□ -0.83
TRIO-202ENST00000344204 COX6A2Q02221 97 aa9.89□□□□□ -0.83
TRIO-202ENST00000344204 CDC42SE2Q9NRR3 84 aa9.89□□□□□ -0.83
TRIO-202ENST00000344204 ESM1Q9NQ30 184 aa9.89□□□□□ -0.83
TRIO-202ENST00000344204 RNF223E7ERA6 249 aa9.88□□□□□ -0.83
TRIO-202ENST00000344204 NOTCH1P46531 2555 aa9.88□□□□□ -0.83
TRIO-202ENST00000344204 CHD6Q8TD26 2715 aa9.88□□□□□ -0.83
TRIO-202ENST00000344204 IGF2-ASQ6U949 168 aa9.86□□□□□ -0.83
TRIO-202ENST00000344204 CHCHD7Q9BUK0 85 aa9.86□□□□□ -0.83
TRIO-202ENST00000344204 hDV103S1A0JD37 113 aa9.86□□□□□ -0.83
TRIO-202ENST00000344204 IL17DQ8TAD2 202 aa9.85□□□□□ -0.83
TRIO-202ENST00000344204 MAPK1IP1LQ8NDC0 245 aa9.85□□□□□ -0.83
TRIO-202ENST00000344204 H0Y9P7 68 aa9.84□□□□□ -0.83
TRIO-202ENST00000344204 COL4A2P08572 1712 aa9.84□□□□□ -0.83
TRIO-202ENST00000344204 HECTD1Q9ULT8 2610 aa9.84□□□□□ -0.83
TRIO-202ENST00000344204 DNAJC9-AS1A6NH13 148 aa9.84□□□□□ -0.83
TRIO-202ENST00000344204 HIGD2AQ9BW72 106 aa9.84□□□□□ -0.83
TRIO-202ENST00000344204 LINC00959A0A1B0GUT2 108 aa9.83□□□□□ -0.84
TRIO-202ENST00000344204 HCG22E2RYF7 251 aa9.83□□□□□ -0.84
TRIO-202ENST00000344204 PRR3P79522 188 aaKnown RBP9.83□□□□□ -0.84
TRIO-202ENST00000344204 C10orf25Q5T742 122 aa9.83□□□□□ -0.84
TRIO-202ENST00000344204 GRNP28799 593 aaKnown RBP9.83□□□□□ -0.84
TRIO-202ENST00000344204 C1orf137Q5JT78 98 aa9.82□□□□□ -0.84
TRIO-202ENST00000344204 IGFL2Q6UWQ7 119 aa9.82□□□□□ -0.84
TRIO-202ENST00000344204 MAP1AP78559 2803 aaPredicted RBP9.82□□□□□ -0.84
TRIO-202ENST00000344204 ERC2-IT1O76042 136 aa9.81□□□□□ -0.84
TRIO-202ENST00000344204 A6NDX4 124 aa9.81□□□□□ -0.84
TRIO-202ENST00000344204 FAM218AQ96MZ4 157 aa9.81□□□□□ -0.84
TRIO-202ENST00000344204 IGKV2-28A0A075B6P5 120 aa9.8□□□□□ -0.84
TRIO-202ENST00000344204 IGLV5-39A0A0G2JS06 123 aa9.8□□□□□ -0.84
TRIO-202ENST00000344204 IGKV2D-28P01615 120 aa9.8□□□□□ -0.84
TRIO-202ENST00000344204 LINC00575Q6W349 94 aa9.8□□□□□ -0.84
TRIO-202ENST00000344204 ATRQ13535 2644 aa9.8□□□□□ -0.84
TRIO-202ENST00000344204 MRGPRG-AS1Q2M3A8 158 aa9.8□□□□□ -0.84
TRIO-202ENST00000344204 DEFB135Q30KP9 77 aa9.8□□□□□ -0.84
TRIO-202ENST00000344204 IGHV4-61A0A0C4DH41 118 aa9.79□□□□□ -0.84
TRIO-202ENST00000344204 NBEAL1Q6ZS30 2694 aa9.78□□□□□ -0.84
TRIO-202ENST00000344204 DEFB4AO15263 64 aa9.78□□□□□ -0.84
TRIO-202ENST00000344204 SPAG11AQ6PDA7 123 aa9.78□□□□□ -0.84
TRIO-202ENST00000344204 KTN1-AS1Q86SY8 53 aa9.78□□□□□ -0.84
TRIO-202ENST00000344204 LOC110117498A0A087WWA1 95 aa9.78□□□□□ -0.84
TRIO-202ENST00000344204 IGHV4-30-4P0DP06 118 aa9.78□□□□□ -0.84
TRIO-202ENST00000344204 IGHV4-31P0DP07 118 aa9.78□□□□□ -0.84
TRIO-202ENST00000344204 PRR15Q8IV56 129 aa9.78□□□□□ -0.84
TRIO-202ENST00000344204 C9orf116Q5BN46 136 aaPredicted RBP9.77□□□□□ -0.85
TRIO-202ENST00000344204 TM2D3Q9BRN9 247 aa9.77□□□□□ -0.85
TRIO-202ENST00000344204 TRAV10A0A0B4J240 114 aa9.76□□□□□ -0.85
TRIO-202ENST00000344204 HELZ2Q9BYK8 2649 aaKnown RBP9.76□□□□□ -0.85
TRIO-202ENST00000344204 MAST4O15021 2626 aa9.75□□□□□ -0.85
TRIO-202ENST00000344204 C8orf87E5RJ46 101 aa9.75□□□□□ -0.85
TRIO-202ENST00000344204 C7orf65Q6ZTY9 151 aa9.75□□□□□ -0.85
TRIO-202ENST00000344204 LINC00482Q8N8I6 264 aa9.75□□□□□ -0.85
TRIO-202ENST00000344204 LINC00474Q9P2X8 69 aa9.75□□□□□ -0.85
TRIO-202ENST00000344204 SYCNQ0VAF6 134 aa9.75□□□□□ -0.85
TRIO-202ENST00000344204 C1orf64Q8NEQ6 169 aa9.75□□□□□ -0.85
TRIO-202ENST00000344204 Q8N2B8 174 aa9.74□□□□□ -0.85
TRIO-202ENST00000344204 DEFB114Q30KQ6 69 aa9.74□□□□□ -0.85
TRIO-202ENST00000344204 C14orf177Q52M58 125 aa9.74□□□□□ -0.85
TRIO-202ENST00000344204 SMIM29Q86T20 159 aa9.74□□□□□ -0.85
TRIO-202ENST00000344204 C9orf66Q5T8R8 295 aa9.74□□□□□ -0.85
TRIO-202ENST00000344204 UNC79Q9P2D8 2635 aa9.73□□□□□ -0.85
TRIO-202ENST00000344204 F8W735 103 aaPredicted RBP9.73□□□□□ -0.85
TRIO-202ENST00000344204 SPATA3Q8NHX4 192 aa9.73□□□□□ -0.85
TRIO-202ENST00000344204 KLKP1Q107X0 134 aa9.73□□□□□ -0.85
TRIO-202ENST00000344204 BRI3O95415 125 aa9.73□□□□□ -0.85
TRIO-202ENST00000344204 PRM2P04554 102 aa9.72□□□□□ -0.85
TRIO-202ENST00000344204 Q6ZQT0 140 aa9.72□□□□□ -0.85
TRIO-202ENST00000344204 Q9UF83 564 aa9.72□□□□□ -0.85
TRIO-202ENST00000344204 LOC100131303A0A0U1RQF7 123 aa9.72□□□□□ -0.85
TRIO-202ENST00000344204 CYSRT1A8MQ03 144 aa9.72□□□□□ -0.85
TRIO-202ENST00000344204 KPRPQ5T749 579 aaPredicted RBP9.71□□□□□ -0.85
TRIO-202ENST00000344204 H7BZZ5 65 aa9.71□□□□□ -0.86
TRIO-202ENST00000344204 Q96MF0 132 aa9.71□□□□□ -0.86
TRIO-202ENST00000344204 FLNAP21333 2647 aaKnown RBP9.7□□□□□ -0.86
TRIO-202ENST00000344204 PCOTHQ58A44 107 aa9.7□□□□□ -0.86
TRIO-202ENST00000344204 A0A096LNI7 61 aa9.7□□□□□ -0.86
TRIO-202ENST00000344204 IGLV5-45A0A087WSX0 123 aa9.7□□□□□ -0.86
TRIO-202ENST00000344204 IGKV2-24A0A0C4DH68 120 aa9.7□□□□□ -0.86
TRIO-202ENST00000344204 UNQ6190/PRO20217Q6UXQ8 127 aa9.69□□□□□ -0.86
TRIO-202ENST00000344204 CYP4F30PQ9H0H9 118 aa9.69□□□□□ -0.86
TRIO-202ENST00000344204 KIF25-AS1Q9Y6Z4 181 aa9.69□□□□□ -0.86
TRIO-202ENST00000344204 A8MTW9 85 aa9.69□□□□□ -0.86
TRIO-202ENST00000344204 ATP11AUNQ6ZP68 121 aa9.68□□□□□ -0.86
TRIO-202ENST00000344204 C4orf48Q5BLP8 95 aa9.68□□□□□ -0.86
TRIO-202ENST00000344204 RPL37AP8A6NKH3 93 aa9.68□□□□□ -0.86
TRIO-202ENST00000344204 MDFIQ99750 246 aa9.67□□□□□ -0.86
TRIO-202ENST00000344204 TNFRSF13BO14836 293 aaPredicted RBP9.66□□□□□ -0.86
TRIO-202ENST00000344204 COL6A5A8TX70 2615 aa9.66□□□□□ -0.86
TRIO-202ENST00000344204 LELP1Q5T871 98 aa9.66□□□□□ -0.86
TRIO-202ENST00000344204 C2orf48Q96LS8 159 aa9.65□□□□□ -0.86
TRIO-202ENST00000344204 EGFEM1PQ0D2K5 195 aa9.65□□□□□ -0.86
TRIO-202ENST00000344204 PLA2G2CQ5R387 149 aa9.65□□□□□ -0.86
TRIO-202ENST00000344204 LMO4P61968 165 aa9.65□□□□□ -0.87
TRIO-202ENST00000344204 Q6ZSN1 163 aa9.64□□□□□ -0.87
TRIO-202ENST00000344204 A0A1B0GW54 56 aa9.63□□□□□ -0.87
TRIO-202ENST00000344204 BBC3Q96PG8 261 aaPredicted RBP9.63□□□□□ -0.87
TRIO-202ENST00000344204 H3BPC8 53 aa9.63□□□□□ -0.87
TRIO-202ENST00000344204 WISP2O76076 250 aa9.63□□□□□ -0.87
TRIO-202ENST00000344204 RETNLBQ9BQ08 111 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms