RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 COX11Q9Y6N1 276 aa14.18□□□□□ -0.14
VRK2-201ENST00000340157 A0A0U1RRA0 63 aa14.17□□□□□ -0.14
VRK2-201ENST00000340157 SMIM13P0DJ93 91 aa14.16□□□□□ -0.14
VRK2-201ENST00000340157 RAB37Q96AX2 223 aa14.16□□□□□ -0.14
VRK2-201ENST00000340157 KLK5Q9Y337 293 aaPredicted RBP14.16□□□□□ -0.14
VRK2-201ENST00000340157 NUPR2A6NF83 97 aa14.16□□□□□ -0.14
VRK2-201ENST00000340157 PRSS2P07478 247 aa14.16□□□□□ -0.14
VRK2-201ENST00000340157 NPC2P61916 151 aa14.15□□□□□ -0.14
VRK2-201ENST00000340157 MEIG1Q5JSS6 88 aa14.15□□□□□ -0.14
VRK2-201ENST00000340157 A4D1N5 150 aa14.14□□□□□ -0.15
VRK2-201ENST00000340157 IBA57-AS1B1ANH7 110 aa14.14□□□□□ -0.15
VRK2-201ENST00000340157 CIRBPQ14011 172 aaKnown RBP14.14□□□□□ -0.15
VRK2-201ENST00000340157 C1orf43Q9BWL3 253 aa14.14□□□□□ -0.15
VRK2-201ENST00000340157 TMEM238LA0A1B0GVL6 79 aa14.13□□□□□ -0.15
VRK2-201ENST00000340157 A6NJY4 79 aa14.13□□□□□ -0.15
VRK2-201ENST00000340157 Q9HAA7 133 aa14.13□□□□□ -0.15
VRK2-201ENST00000340157 APOMO95445 188 aa14.12□□□□□ -0.15
VRK2-201ENST00000340157 CFC1BP0CG36 223 aa14.12□□□□□ -0.15
VRK2-201ENST00000340157 CFC1P0CG37 223 aa14.12□□□□□ -0.15
VRK2-201ENST00000340157 SFTA2Q6UW10 78 aa14.12□□□□□ -0.15
VRK2-201ENST00000340157 SOSTDC1Q6X4U4 206 aa14.12□□□□□ -0.15
VRK2-201ENST00000340157 LINC00526Q96FQ7 95 aa14.12□□□□□ -0.15
VRK2-201ENST00000340157 IGKV2D-24A0A075B6R9 120 aa14.12□□□□□ -0.15
VRK2-201ENST00000340157 RPL24P83731 157 aaKnown RBP14.12□□□□□ -0.15
VRK2-201ENST00000340157 SPAG11BQ08648 103 aa14.12□□□□□ -0.15
VRK2-201ENST00000340157 C6orf223Q8N319 242 aa14.12□□□□□ -0.15
VRK2-201ENST00000340157 NAA38Q9BRA0 125 aaKnown RBP14.12□□□□□ -0.15
VRK2-201ENST00000340157 CFAP161Q6P656 301 aa14.11□□□□□ -0.15
VRK2-201ENST00000340157 LINC00308Q8TCZ7 52 aa14.11□□□□□ -0.15
VRK2-201ENST00000340157 C9orf118A6NHY6 69 aa14.1□□□□□ -0.15
VRK2-201ENST00000340157 IFITM1P13164 125 aa14.1□□□□□ -0.15
VRK2-201ENST00000340157 CKS1BP61024 79 aa14.1□□□□□ -0.15
VRK2-201ENST00000340157 C15orf56Q8N910 161 aa14.1□□□□□ -0.15
VRK2-201ENST00000340157 KRTAP1-5Q9BYS1 174 aa14.1□□□□□ -0.15
VRK2-201ENST00000340157 CXCL5P42830 114 aa14.09□□□□□ -0.15
VRK2-201ENST00000340157 ERG28Q9UKR5 140 aa14.09□□□□□ -0.15
VRK2-201ENST00000340157 C10orf25Q5T742 122 aa14.08□□□□□ -0.16
VRK2-201ENST00000340157 MIR7-3HGQ8N6C7 128 aa14.08□□□□□ -0.16
VRK2-201ENST00000340157 H3BUT2 72 aa14.07□□□□□ -0.16
VRK2-201ENST00000340157 PFN2P35080 140 aa14.07□□□□□ -0.16
VRK2-201ENST00000340157 UBE2DNLQ8IWF7 75 aa14.07□□□□□ -0.16
VRK2-201ENST00000340157 LINC00158P58513 81 aa14.06□□□□□ -0.16
VRK2-201ENST00000340157 UNQ6190/PRO20217Q6UXQ8 127 aa14.06□□□□□ -0.16
VRK2-201ENST00000340157 TGP01266 2768 aa14.06□□□□□ -0.16
VRK2-201ENST00000340157 HIGD2BQ4VC39 106 aa14.06□□□□□ -0.16
VRK2-201ENST00000340157 NTN5Q8WTR8 489 aaPredicted RBP14.06□□□□□ -0.16
VRK2-201ENST00000340157 C9orf116Q5BN46 136 aaPredicted RBP14.05□□□□□ -0.16
VRK2-201ENST00000340157 CASC10Q5T4H9 136 aa14.05□□□□□ -0.16
VRK2-201ENST00000340157 A0A0B4J2C4 111 aa14.04□□□□□ -0.16
VRK2-201ENST00000340157 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.02□□□□□ -0.16
VRK2-201ENST00000340157 PPDPFQ9H3Y8 114 aa14.02□□□□□ -0.16
VRK2-201ENST00000340157 PGPEP1Q9NXJ5 209 aa14.02□□□□□ -0.16
VRK2-201ENST00000340157 VPS13DQ5THJ4 4388 aa14.02□□□□□ -0.16
VRK2-201ENST00000340157 DNAH10Q8IVF4 4471 aa14.01□□□□□ -0.17
VRK2-201ENST00000340157 TSPAN13O95857 204 aa14.01□□□□□ -0.17
VRK2-201ENST00000340157 PRO1854Q9UHT4 67 aa14.01□□□□□ -0.17
VRK2-201ENST00000340157 A0A1W2PPM0 123 aa14□□□□□ -0.17
VRK2-201ENST00000340157 C6orf48Q9UBA6 75 aa13.99□□□□□ -0.17
VRK2-201ENST00000340157 GVQW2A0A096LPI5 108 aaPredicted RBP13.99□□□□□ -0.17
VRK2-201ENST00000340157 ZNF561-AS1K7EIQ3 104 aa13.99□□□□□ -0.17
VRK2-201ENST00000340157 VAMP3Q15836 100 aa13.99□□□□□ -0.17
VRK2-201ENST00000340157 COX17Q14061 63 aa13.98□□□□□ -0.17
VRK2-201ENST00000340157 COPS9Q8WXC6 57 aa13.98□□□□□ -0.17
VRK2-201ENST00000340157 RMI2Q96E14 147 aa13.97□□□□□ -0.17
VRK2-201ENST00000340157 C2orf48Q96LS8 159 aa13.95□□□□□ -0.18
VRK2-201ENST00000340157 CAMK2N2Q96S95 79 aa13.95□□□□□ -0.18
VRK2-201ENST00000340157 Q6ZRU5 148 aa13.95□□□□□ -0.18
VRK2-201ENST00000340157 MUC7Q8TAX7 377 aa13.95□□□□□ -0.18
VRK2-201ENST00000340157 USP17L23D6RBM5 183 aa13.94□□□□□ -0.18
VRK2-201ENST00000340157 SND1-IT1Q9HBX3 110 aa13.94□□□□□ -0.18
VRK2-201ENST00000340157 LOC107984156A0A0G2JMH3 177 aa13.93□□□□□ -0.18
VRK2-201ENST00000340157 ARL17AQ8IVW1 177 aa13.93□□□□□ -0.18
VRK2-201ENST00000340157 IGKV2-28A0A075B6P5 120 aa13.93□□□□□ -0.18
VRK2-201ENST00000340157 H7C2G1 150 aa13.93□□□□□ -0.18
VRK2-201ENST00000340157 IGKV2D-28P01615 120 aa13.93□□□□□ -0.18
VRK2-201ENST00000340157 FABP2P12104 132 aa13.93□□□□□ -0.18
VRK2-201ENST00000340157 TRBV30A0A0K0K1B3 111 aa13.91□□□□□ -0.18
VRK2-201ENST00000340157 NBDYA0A0U1RRE5 68 aa13.91□□□□□ -0.18
VRK2-201ENST00000340157 UBE2V1Q13404 147 aa13.91□□□□□ -0.18
VRK2-201ENST00000340157 LECT2O14960 151 aa13.9□□□□□ -0.18
VRK2-201ENST00000340157 SLPIP03973 132 aa13.9□□□□□ -0.18
VRK2-201ENST00000340157 RPL13AP40429 203 aaKnown RBP13.9□□□□□ -0.18
VRK2-201ENST00000340157 K7EP34 96 aa13.89□□□□□ -0.19
VRK2-201ENST00000340157 WFDC2Q14508 124 aa13.89□□□□□ -0.19
VRK2-201ENST00000340157 SPCS1Q9Y6A9 102 aa13.89□□□□□ -0.19
VRK2-201ENST00000340157 LINC00337Q8N6G1 96 aa13.89□□□□□ -0.19
VRK2-201ENST00000340157 Q8NDZ9 215 aa13.89□□□□□ -0.19
VRK2-201ENST00000340157 F8WDY8 70 aa13.88□□□□□ -0.19
VRK2-201ENST00000340157 SYCNQ0VAF6 134 aa13.87□□□□□ -0.19
VRK2-201ENST00000340157 KMT2AQ03164 3969 aa13.87□□□□□ -0.19
VRK2-201ENST00000340157 GAGE10A6NGK3 116 aa13.87□□□□□ -0.19
VRK2-201ENST00000340157 TTC32Q5I0X7 151 aa13.87□□□□□ -0.19
VRK2-201ENST00000340157 WWC2-AS2Q96NR7 200 aa13.87□□□□□ -0.19
VRK2-201ENST00000340157 Q1RN00 199 aa13.86□□□□□ -0.19
VRK2-201ENST00000340157 TRIAP1O43715 76 aa13.84□□□□□ -0.19
VRK2-201ENST00000340157 PRR3P79522 188 aaKnown RBP13.83□□□□□ -0.2
VRK2-201ENST00000340157 Q6ZRN7 208 aaPredicted RBP13.82□□□□□ -0.2
VRK2-201ENST00000340157 GTF2H5Q6ZYL4 71 aa13.82□□□□□ -0.2
VRK2-201ENST00000340157 CARD19Q96LW7 228 aa13.82□□□□□ -0.2
VRK2-201ENST00000340157 XAGE1AQ9HD64 81 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms