RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 IGLV4-3A0A075B6K6 122 aa11.89□□□□□ -0.51
ITGA4-202ENST00000339307 IGIPA6NJ69 53 aa11.89□□□□□ -0.51
ITGA4-202ENST00000339307 LINC00242Q5T6M2 205 aa11.89□□□□□ -0.51
ITGA4-202ENST00000339307 TEX43Q6ZNM6 134 aa11.89□□□□□ -0.51
ITGA4-202ENST00000339307 ERASQ7Z444 233 aa11.89□□□□□ -0.51
ITGA4-202ENST00000339307 URB1-AS1Q96HZ7 61 aa11.89□□□□□ -0.51
ITGA4-202ENST00000339307 IGLV7-43P04211 117 aa11.88□□□□□ -0.51
ITGA4-202ENST00000339307 Q6ZN92 141 aa11.88□□□□□ -0.51
ITGA4-202ENST00000339307 UBE2BP63146 152 aa11.87□□□□□ -0.51
ITGA4-202ENST00000339307 C2orf82Q6UX34 121 aa11.87□□□□□ -0.51
ITGA4-202ENST00000339307 BAGE3Q86Y29 109 aa11.87□□□□□ -0.51
ITGA4-202ENST00000339307 DIRC1Q969H9 104 aa11.87□□□□□ -0.51
ITGA4-202ENST00000339307 PACRGQ96M98 296 aaPredicted RBP11.87□□□□□ -0.51
ITGA4-202ENST00000339307 C2orf88Q9BSF0 95 aa11.87□□□□□ -0.51
ITGA4-202ENST00000339307 LRP2P98164 4655 aa11.87□□□□□ -0.51
ITGA4-202ENST00000339307 TLX1NBP0CAT3 122 aa11.86□□□□□ -0.51
ITGA4-202ENST00000339307 HBDP02042 147 aa11.86□□□□□ -0.51
ITGA4-202ENST00000339307 ZC2HC1BQ5TFG8 222 aa11.86□□□□□ -0.51
ITGA4-202ENST00000339307 SCGB3A1Q96QR1 104 aa11.86□□□□□ -0.51
ITGA4-202ENST00000339307 PRSS2P07478 247 aa11.85□□□□□ -0.51
ITGA4-202ENST00000339307 KIAA0087Q14695 138 aa11.85□□□□□ -0.51
ITGA4-202ENST00000339307 KRTAP11-1Q8IUC1 163 aa11.85□□□□□ -0.51
ITGA4-202ENST00000339307 AMELXQ99217 191 aa11.85□□□□□ -0.51
ITGA4-202ENST00000339307 VCX2Q9H322 139 aa11.85□□□□□ -0.51
ITGA4-202ENST00000339307 TOMM7Q9P0U1 55 aa11.85□□□□□ -0.51
ITGA4-202ENST00000339307 TRBV30A0A0K0K1B3 111 aa11.84□□□□□ -0.51
ITGA4-202ENST00000339307 M0QXV9 152 aa11.84□□□□□ -0.51
ITGA4-202ENST00000339307 UBE2D1P51668 147 aa11.84□□□□□ -0.51
ITGA4-202ENST00000339307 HSBP1O75506 76 aa11.83□□□□□ -0.52
ITGA4-202ENST00000339307 PRR26Q8N8Z3 221 aa11.83□□□□□ -0.52
ITGA4-202ENST00000339307 A0A096LNJ9 63 aa11.82□□□□□ -0.52
ITGA4-202ENST00000339307 HIST1H2BKO60814 126 aa11.82□□□□□ -0.52
ITGA4-202ENST00000339307 HIST1H2BJP06899 126 aa11.82□□□□□ -0.52
ITGA4-202ENST00000339307 HIST1H2BOP23527 126 aa11.82□□□□□ -0.52
ITGA4-202ENST00000339307 HIST1H2BBP33778 126 aa11.82□□□□□ -0.52
ITGA4-202ENST00000339307 HIST1H2BDP58876 126 aa11.82□□□□□ -0.52
ITGA4-202ENST00000339307 HIST1H2BCP62807 126 aa11.82□□□□□ -0.52
ITGA4-202ENST00000339307 HIST2H2BEQ16778 126 aa11.82□□□□□ -0.52
ITGA4-202ENST00000339307 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.82□□□□□ -0.52
ITGA4-202ENST00000339307 HIST1H2BHQ93079 126 aa11.82□□□□□ -0.52
ITGA4-202ENST00000339307 HIST1H2BNQ99877 126 aa11.82□□□□□ -0.52
ITGA4-202ENST00000339307 HIST1H2BMQ99879 126 aa11.82□□□□□ -0.52
ITGA4-202ENST00000339307 NDUFC2-KCTD14E9PQ53 114 aa11.81□□□□□ -0.52
ITGA4-202ENST00000339307 ATP5LO75964 103 aa11.81□□□□□ -0.52
ITGA4-202ENST00000339307 CKS1BP61024 79 aa11.81□□□□□ -0.52
ITGA4-202ENST00000339307 PDZD11Q5EBL8 140 aa11.81□□□□□ -0.52
ITGA4-202ENST00000339307 H0Y9J4 135 aa11.8□□□□□ -0.52
ITGA4-202ENST00000339307 SEC11AP67812 179 aa11.8□□□□□ -0.52
ITGA4-202ENST00000339307 C6orf226Q5I0X4 101 aa11.8□□□□□ -0.52
ITGA4-202ENST00000339307 RNF213Q63HN8 5207 aa11.8□□□□□ -0.52
ITGA4-202ENST00000339307 SERF1AO75920 110 aa11.79□□□□□ -0.52
ITGA4-202ENST00000339307 FAM19A3Q7Z5A8 133 aa11.79□□□□□ -0.52
ITGA4-202ENST00000339307 C9orf129Q5T035 196 aaKnown RBP11.78□□□□□ -0.52
ITGA4-202ENST00000339307 LINC00173Q6ZV60 143 aa11.78□□□□□ -0.52
ITGA4-202ENST00000339307 KRTAP7-1Q8IUC3 87 aa11.78□□□□□ -0.52
ITGA4-202ENST00000339307 LINC00469Q8N7U9 141 aa11.78□□□□□ -0.52
ITGA4-202ENST00000339307 LINC01561Q8N1V8 128 aa11.77□□□□□ -0.52
ITGA4-202ENST00000339307 PMVKQ15126 192 aa11.77□□□□□ -0.53
ITGA4-202ENST00000339307 PMCHL1Q16048 86 aa11.77□□□□□ -0.53
ITGA4-202ENST00000339307 LINC00310P59036 64 aa11.76□□□□□ -0.53
ITGA4-202ENST00000339307 COA6Q5JTJ3 125 aaKnown RBP11.75□□□□□ -0.53
ITGA4-202ENST00000339307 CST9LQ9H4G1 147 aa11.75□□□□□ -0.53
ITGA4-202ENST00000339307 GEMIN7Q9H840 131 aaKnown RBP11.75□□□□□ -0.53
ITGA4-202ENST00000339307 HERVK_113P63121 156 aa11.73□□□□□ -0.53
ITGA4-202ENST00000339307 Q8IZM0 81 aa11.73□□□□□ -0.53
ITGA4-202ENST00000339307 FAM19A2Q8N3H0 131 aa11.73□□□□□ -0.53
ITGA4-202ENST00000339307 XAGE1AQ9HD64 81 aa11.73□□□□□ -0.53
ITGA4-202ENST00000339307 IGLV1-50A0A075B6I6 118 aa11.72□□□□□ -0.53
ITGA4-202ENST00000339307 LEPROTL1O95214 131 aa11.72□□□□□ -0.53
ITGA4-202ENST00000339307 IFI27L1Q96BM0 104 aa11.72□□□□□ -0.53
ITGA4-202ENST00000339307 CDKN2A-AS1Q9UH64 79 aa11.72□□□□□ -0.53
ITGA4-202ENST00000339307 TINCRA0A1B0GVN0 87 aa11.71□□□□□ -0.53
ITGA4-202ENST00000339307 NUPR1O60356 82 aa11.71□□□□□ -0.53
ITGA4-202ENST00000339307 HSPB8Q9UJY1 196 aa11.71□□□□□ -0.53
ITGA4-202ENST00000339307 TRAV12-1A0A0B4J245 112 aa11.7□□□□□ -0.54
ITGA4-202ENST00000339307 C22orf24Q9Y442 160 aa11.7□□□□□ -0.54
ITGA4-202ENST00000339307 F8VRH5 84 aa11.69□□□□□ -0.54
ITGA4-202ENST00000339307 KRTAP1-4P0C5Y4 121 aa11.69□□□□□ -0.54
ITGA4-202ENST00000339307 LBHQ53QV2 105 aaPredicted RBP11.69□□□□□ -0.54
ITGA4-202ENST00000339307 IGLV5-45A0A087WSX0 123 aa11.68□□□□□ -0.54
ITGA4-202ENST00000339307 NDUFA6P56556 154 aa11.68□□□□□ -0.54
ITGA4-202ENST00000339307 IGLC3P0DOY3 106 aa11.67□□□□□ -0.54
ITGA4-202ENST00000339307 ZNF861PO60384 105 aa11.66□□□□□ -0.54
ITGA4-202ENST00000339307 RPL13AP40429 203 aaKnown RBP11.66□□□□□ -0.54
ITGA4-202ENST00000339307 CXCL5P42830 114 aa11.64□□□□□ -0.55
ITGA4-202ENST00000339307 PRR4Q16378 134 aa11.64□□□□□ -0.55
ITGA4-202ENST00000339307 CHTOPQ9Y3Y2 248 aaKnown RBP11.64□□□□□ -0.55
ITGA4-202ENST00000339307 H3BRM9 83 aa11.63□□□□□ -0.55
ITGA4-202ENST00000339307 FABP4P15090 132 aa11.63□□□□□ -0.55
ITGA4-202ENST00000339307 MRPL55Q7Z7F7 128 aaKnown RBP11.63□□□□□ -0.55
ITGA4-202ENST00000339307 COX7B2Q8TF08 81 aa11.63□□□□□ -0.55
ITGA4-202ENST00000339307 MAP1LC3CQ9BXW4 147 aa11.63□□□□□ -0.55
ITGA4-202ENST00000339307 RPL37AP8A6NKH3 93 aa11.61□□□□□ -0.55
ITGA4-202ENST00000339307 SMIM1B2RUZ4 78 aa11.61□□□□□ -0.55
ITGA4-202ENST00000339307 LPAP08519 4548 aa11.61□□□□□ -0.55
ITGA4-202ENST00000339307 S100A6P06703 90 aa11.6□□□□□ -0.55
ITGA4-202ENST00000339307 GAGE10A6NGK3 116 aa11.6□□□□□ -0.55
ITGA4-202ENST00000339307 SPINK8P0C7L1 97 aa11.6□□□□□ -0.55
ITGA4-202ENST00000339307 RPL28P46779 137 aaKnown RBP11.6□□□□□ -0.55
ITGA4-202ENST00000339307 TP73-AS1Q9UF72 201 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms