RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 ENHOQ6UWT2 76 aa14.25□□□□□ -0.13
RUNX3-202ENST00000338888 DEFB113Q30KQ7 82 aa14.25□□□□□ -0.13
RUNX3-202ENST00000338888 TEX15Q9BXT5 2789 aa14.24□□□□□ -0.13
RUNX3-202ENST00000338888 CCDC168Q8NDH2 2452 aa14.24□□□□□ -0.13
RUNX3-202ENST00000338888 WIPF1O43516 503 aa14.23□□□□□ -0.13
RUNX3-202ENST00000338888 TLN2Q9Y4G6 2542 aa14.23□□□□□ -0.13
RUNX3-202ENST00000338888 S100A7L2Q5SY68 101 aa14.23□□□□□ -0.13
RUNX3-202ENST00000338888 ZNF469Q96JG9 3925 aaPredicted RBP14.22□□□□□ -0.13
RUNX3-202ENST00000338888 LY6G6DO95868 133 aa14.22□□□□□ -0.13
RUNX3-202ENST00000338888 A0A087WZ39 114 aa14.22□□□□□ -0.13
RUNX3-202ENST00000338888 PRR3P79522 188 aaKnown RBP14.22□□□□□ -0.13
RUNX3-202ENST00000338888 C6orf226Q5I0X4 101 aa14.22□□□□□ -0.13
RUNX3-202ENST00000338888 TRGV2A0A075B6R0 118 aa14.21□□□□□ -0.13
RUNX3-202ENST00000338888 HELZ2Q9BYK8 2649 aaKnown RBP14.21□□□□□ -0.13
RUNX3-202ENST00000338888 JMJD7-PLA2G4BH0Y9G9 81 aa14.21□□□□□ -0.14
RUNX3-202ENST00000338888 C20orf197Q8N268 126 aa14.21□□□□□ -0.14
RUNX3-202ENST00000338888 TRAV25A0A0B4J276 109 aa14.2□□□□□ -0.14
RUNX3-202ENST00000338888 RNASE1P07998 156 aaKnown RBP14.2□□□□□ -0.14
RUNX3-202ENST00000338888 MXRA5Q9NR99 2828 aa14.2□□□□□ -0.14
RUNX3-202ENST00000338888 IGHV4-31P0DP07 118 aa14.19□□□□□ -0.14
RUNX3-202ENST00000338888 Q8N814 137 aa14.19□□□□□ -0.14
RUNX3-202ENST00000338888 KMT2BQ9UMN6 2715 aaPredicted RBP14.19□□□□□ -0.14
RUNX3-202ENST00000338888 Q6YL49 198 aa14.18□□□□□ -0.14
RUNX3-202ENST00000338888 WNK1Q9H4A3 2382 aa14.18□□□□□ -0.14
RUNX3-202ENST00000338888 NDUFC2O95298 119 aa14.17□□□□□ -0.14
RUNX3-202ENST00000338888 ATP5EP2Q5VTU8 51 aa14.17□□□□□ -0.14
RUNX3-202ENST00000338888 LINC00167Q96N53 147 aa14.17□□□□□ -0.14
RUNX3-202ENST00000338888 NANOS2P60321 138 aaKnown RBP14.17□□□□□ -0.14
RUNX3-202ENST00000338888 CR1P17927 2039 aa14.17□□□□□ -0.14
RUNX3-202ENST00000338888 TMEM256-PLSCR3K7ERE1 68 aa14.16□□□□□ -0.14
RUNX3-202ENST00000338888 C4orf3Q8WVX3 66 aa14.16□□□□□ -0.14
RUNX3-202ENST00000338888 TRBV6-8A0A0A6YYG3 113 aa14.16□□□□□ -0.14
RUNX3-202ENST00000338888 TRGV4A0A0C4DH28 118 aa14.16□□□□□ -0.14
RUNX3-202ENST00000338888 PLA2G2AP14555 144 aa14.16□□□□□ -0.14
RUNX3-202ENST00000338888 TMEM86BQ8N661 226 aa14.16□□□□□ -0.14
RUNX3-202ENST00000338888 MYO9AB2RTY4 2548 aa14.15□□□□□ -0.14
RUNX3-202ENST00000338888 J3QLI3 93 aa14.15□□□□□ -0.14
RUNX3-202ENST00000338888 LYPD5Q6UWN5 251 aa14.15□□□□□ -0.14
RUNX3-202ENST00000338888 UBL5Q9BZL1 73 aa14.15□□□□□ -0.14
RUNX3-202ENST00000338888 ITPR3Q14573 2671 aa14.15□□□□□ -0.15
RUNX3-202ENST00000338888 LINC00959A0A1B0GUT2 108 aa14.14□□□□□ -0.15
RUNX3-202ENST00000338888 XCL1P47992 114 aa14.14□□□□□ -0.15
RUNX3-202ENST00000338888 SONP18583 2426 aaKnown RBP14.14□□□□□ -0.15
RUNX3-202ENST00000338888 NDUFC2-KCTD14E9PQ53 114 aa14.13□□□□□ -0.15
RUNX3-202ENST00000338888 J3QKU1 62 aa14.13□□□□□ -0.15
RUNX3-202ENST00000338888 PLAC8L1A1L4L8 177 aa14.12□□□□□ -0.15
RUNX3-202ENST00000338888 KRTAP1-3Q8IUG1 177 aa14.11□□□□□ -0.15
RUNX3-202ENST00000338888 WFDC11Q8NEX6 87 aa14.11□□□□□ -0.15
RUNX3-202ENST00000338888 FAM236DA0A1B0GTK5 79 aa14.11□□□□□ -0.15
RUNX3-202ENST00000338888 FAM236CP0DP71 79 aa14.11□□□□□ -0.15
RUNX3-202ENST00000338888 ITPR2Q14571 2701 aa14.09□□□□□ -0.15
RUNX3-202ENST00000338888 FLNAP21333 2647 aaKnown RBP14.09□□□□□ -0.15
RUNX3-202ENST00000338888 TRBV10-3A0A0K0K1G6 114 aa14.09□□□□□ -0.15
RUNX3-202ENST00000338888 CLPSL2Q6UWE3 100 aa14.09□□□□□ -0.15
RUNX3-202ENST00000338888 GIG44P09565 113 aaPredicted RBP14.08□□□□□ -0.16
RUNX3-202ENST00000338888 C11orf44Q8N8P7 122 aa14.08□□□□□ -0.16
RUNX3-202ENST00000338888 AKAP9Q99996 3911 aa14.08□□□□□ -0.16
RUNX3-202ENST00000338888 JMJD1CQ15652 2540 aa14.07□□□□□ -0.16
RUNX3-202ENST00000338888 C16orf74Q96GX8 76 aa14.07□□□□□ -0.16
RUNX3-202ENST00000338888 A0A1W2PRX2 142 aa14.07□□□□□ -0.16
RUNX3-202ENST00000338888 C6orf99Q4VX62 202 aa14.07□□□□□ -0.16
RUNX3-202ENST00000338888 Q8IZM0 81 aa14.06□□□□□ -0.16
RUNX3-202ENST00000338888 WFDC10AQ9H1F0 79 aa14.06□□□□□ -0.16
RUNX3-202ENST00000338888 H7BZZ5 65 aa14.05□□□□□ -0.16
RUNX3-202ENST00000338888 FSHBP01225 129 aa14.05□□□□□ -0.16
RUNX3-202ENST00000338888 RPL35AP18077 110 aaKnown RBP14.05□□□□□ -0.16
RUNX3-202ENST00000338888 ACANP16112 2415 aa14.05□□□□□ -0.16
RUNX3-202ENST00000338888 M0R2N4 97 aa14.05□□□□□ -0.16
RUNX3-202ENST00000338888 GCN1Q92616 2671 aaKnown RBP14.04□□□□□ -0.16
RUNX3-202ENST00000338888 HAMPP81172 84 aa14.03□□□□□ -0.16
RUNX3-202ENST00000338888 RBM3P98179 157 aaKnown RBP14.03□□□□□ -0.16
RUNX3-202ENST00000338888 Q6ZQT0 140 aa14.03□□□□□ -0.16
RUNX3-202ENST00000338888 TRAV7A0A075B6U4 112 aa14.02□□□□□ -0.16
RUNX3-202ENST00000338888 PDZD2O15018 2839 aa14.02□□□□□ -0.17
RUNX3-202ENST00000338888 TRAV10A0A0B4J240 114 aa14.01□□□□□ -0.17
RUNX3-202ENST00000338888 C9orf116Q5BN46 136 aaPredicted RBP14.01□□□□□ -0.17
RUNX3-202ENST00000338888 UNC79Q9P2D8 2635 aa14.01□□□□□ -0.17
RUNX3-202ENST00000338888 HECTD1Q9ULT8 2610 aa14.01□□□□□ -0.17
RUNX3-202ENST00000338888 LAMTOR3Q9UHA4 124 aa14.01□□□□□ -0.17
RUNX3-202ENST00000338888 SNURFQ9Y675 71 aa14.01□□□□□ -0.17
RUNX3-202ENST00000338888 LINC01547P58512 204 aaPredicted RBP14□□□□□ -0.17
RUNX3-202ENST00000338888 Q8NDZ9 215 aa14□□□□□ -0.17
RUNX3-202ENST00000338888 SERP1Q9Y6X1 66 aa14□□□□□ -0.17
RUNX3-202ENST00000338888 LINC00575Q6W349 94 aa13.99□□□□□ -0.17
RUNX3-202ENST00000338888 RMI2Q96E14 147 aa13.98□□□□□ -0.17
RUNX3-202ENST00000338888 FASNP49327 2511 aaKnown RBP13.98□□□□□ -0.17
RUNX3-202ENST00000338888 EPM2AB3EWF7 344 aa13.97□□□□□ -0.17
RUNX3-202ENST00000338888 DEFB130BP0DP73 79 aa13.97□□□□□ -0.17
RUNX3-202ENST00000338888 DEFB130AP0DP74 79 aa13.97□□□□□ -0.17
RUNX3-202ENST00000338888 Q6ZVQ6 151 aa13.97□□□□□ -0.17
RUNX3-202ENST00000338888 NIPBLQ6KC79 2804 aaeCLIP13.96□□□□□ -0.17
RUNX3-202ENST00000338888 SETXQ7Z333 2677 aaKnown RBP13.96□□□□□ -0.17
RUNX3-202ENST00000338888 LINC00482Q8N8I6 264 aa13.96□□□□□ -0.17
RUNX3-202ENST00000338888 A0A096LPF7 62 aa13.95□□□□□ -0.18
RUNX3-202ENST00000338888 ZNF561-AS1K7EIQ3 104 aa13.95□□□□□ -0.18
RUNX3-202ENST00000338888 NOTCH2Q04721 2471 aa13.95□□□□□ -0.18
RUNX3-202ENST00000338888 KIAA0087Q14695 138 aa13.95□□□□□ -0.18
RUNX3-202ENST00000338888 NF1P21359 2839 aa13.95□□□□□ -0.18
RUNX3-202ENST00000338888 CCL24O00175 119 aa13.95□□□□□ -0.18
RUNX3-202ENST00000338888 KLKP1Q107X0 134 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms