RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 TINCRA0A1B0GVN0 87 aa9.49□□□□□ -0.89
PRKN-201ENST00000338468 LINC00614P0C842 121 aa9.49□□□□□ -0.89
PRKN-201ENST00000338468 CBLN2Q8IUK8 224 aa9.49□□□□□ -0.89
PRKN-201ENST00000338468 GEMIN7Q9H840 131 aaKnown RBP9.49□□□□□ -0.89
PRKN-201ENST00000338468 IGLV5-45A0A087WSX0 123 aa9.48□□□□□ -0.89
PRKN-201ENST00000338468 TRBV30A0A0K0K1B3 111 aa9.48□□□□□ -0.89
PRKN-201ENST00000338468 PMVKQ15126 192 aa9.48□□□□□ -0.89
PRKN-201ENST00000338468 PMCHL1Q16048 86 aa9.48□□□□□ -0.89
PRKN-201ENST00000338468 Q8IZM0 81 aa9.48□□□□□ -0.89
PRKN-201ENST00000338468 TOMM7Q9P0U1 55 aa9.47□□□□□ -0.89
PRKN-201ENST00000338468 FAM168BA1KXE4 195 aa9.46□□□□□ -0.9
PRKN-201ENST00000338468 SMIM1B2RUZ4 78 aa9.46□□□□□ -0.9
PRKN-201ENST00000338468 PDZD11Q5EBL8 140 aa9.46□□□□□ -0.9
PRKN-201ENST00000338468 KRTAP7-1Q8IUC3 87 aa9.46□□□□□ -0.9
PRKN-201ENST00000338468 LINC00469Q8N7U9 141 aa9.46□□□□□ -0.9
PRKN-201ENST00000338468 HBDP02042 147 aa9.45□□□□□ -0.9
PRKN-201ENST00000338468 PRSS2P07478 247 aa9.45□□□□□ -0.9
PRKN-201ENST00000338468 GAGE2EQ4V326 116 aa9.45□□□□□ -0.9
PRKN-201ENST00000338468 C6orf226Q5I0X4 101 aa9.45□□□□□ -0.9
PRKN-201ENST00000338468 PACRGQ96M98 296 aaPredicted RBP9.45□□□□□ -0.9
PRKN-201ENST00000338468 GAGE2DQ9UEU5 116 aa9.45□□□□□ -0.9
PRKN-201ENST00000338468 NDUFC2-KCTD14E9PQ53 114 aa9.44□□□□□ -0.9
PRKN-201ENST00000338468 PHF5AQ7RTV0 110 aaKnown RBP9.44□□□□□ -0.9
PRKN-201ENST00000338468 IGLC3P0DOY3 106 aa9.43□□□□□ -0.9
PRKN-201ENST00000338468 RAB5BP61020 215 aa9.43□□□□□ -0.9
PRKN-201ENST00000338468 CKS1BP61024 79 aa9.43□□□□□ -0.9
PRKN-201ENST00000338468 C9orf129Q5T035 196 aaKnown RBP9.43□□□□□ -0.9
PRKN-201ENST00000338468 SPINK8P0C7L1 97 aa9.42□□□□□ -0.9
PRKN-201ENST00000338468 MT1HL1P0DM35 61 aa9.42□□□□□ -0.9
PRKN-201ENST00000338468 KRTAP11-1Q8IUC1 163 aa9.42□□□□□ -0.9
PRKN-201ENST00000338468 TNXBP22105 4242 aa9.42□□□□□ -0.9
PRKN-201ENST00000338468 F8VRH5 84 aa9.41□□□□□ -0.9
PRKN-201ENST00000338468 SRSF9Q13242 221 aaKnown RBP eCLIP9.41□□□□□ -0.9
PRKN-201ENST00000338468 COX7B2Q8TF08 81 aa9.41□□□□□ -0.9
PRKN-201ENST00000338468 PSORS1C2Q9UIG4 136 aa9.41□□□□□ -0.9
PRKN-201ENST00000338468 NDUFA6P56556 154 aa9.4□□□□□ -0.9
PRKN-201ENST00000338468 FAM19A5Q7Z5A7 132 aaPredicted RBP9.4□□□□□ -0.9
PRKN-201ENST00000338468 ATP5LO75964 103 aa9.39□□□□□ -0.91
PRKN-201ENST00000338468 TRGC2P03986 189 aa9.39□□□□□ -0.91
PRKN-201ENST00000338468 ZNF22P17026 224 aaPredicted RBP9.39□□□□□ -0.91
PRKN-201ENST00000338468 CXCL5P42830 114 aa9.39□□□□□ -0.91
PRKN-201ENST00000338468 CHCHD1Q96BP2 118 aaKnown RBP9.39□□□□□ -0.91
PRKN-201ENST00000338468 IGLV5-39A0A0G2JS06 123 aa9.38□□□□□ -0.91
PRKN-201ENST00000338468 C11orf86A6NJI1 115 aa9.37□□□□□ -0.91
PRKN-201ENST00000338468 COLCA2A8K830 154 aa9.37□□□□□ -0.91
PRKN-201ENST00000338468 H3BRM9 83 aa9.37□□□□□ -0.91
PRKN-201ENST00000338468 BAGE3Q86Y29 109 aa9.37□□□□□ -0.91
PRKN-201ENST00000338468 M0QXV9 152 aa9.36□□□□□ -0.91
PRKN-201ENST00000338468 LINC00310P59036 64 aa9.36□□□□□ -0.91
PRKN-201ENST00000338468 SPINK6Q6UWN8 80 aa9.36□□□□□ -0.91
PRKN-201ENST00000338468 XAGE1AQ9HD64 81 aa9.36□□□□□ -0.91
PRKN-201ENST00000338468 C1orf137Q5JT78 98 aa9.34□□□□□ -0.91
PRKN-201ENST00000338468 FAM19A2Q8N3H0 131 aa9.34□□□□□ -0.91
PRKN-201ENST00000338468 IFI27L1Q96BM0 104 aa9.34□□□□□ -0.91
PRKN-201ENST00000338468 TRAV12-1A0A0B4J245 112 aa9.33□□□□□ -0.92
PRKN-201ENST00000338468 LINC01600Q96MT4 127 aa9.33□□□□□ -0.92
PRKN-201ENST00000338468 RNF213Q63HN8 5207 aa9.33□□□□□ -0.92
PRKN-201ENST00000338468 HSBP1O75506 76 aa9.32□□□□□ -0.92
PRKN-201ENST00000338468 CHTOPQ9Y3Y2 248 aaKnown RBP9.32□□□□□ -0.92
PRKN-201ENST00000338468 C22orf24Q9Y442 160 aa9.32□□□□□ -0.92
PRKN-201ENST00000338468 SERF1AO75920 110 aa9.31□□□□□ -0.92
PRKN-201ENST00000338468 IGLV7-43P04211 117 aa9.31□□□□□ -0.92
PRKN-201ENST00000338468 TMEM170BQ5T4T1 132 aa9.31□□□□□ -0.92
PRKN-201ENST00000338468 LRP2P98164 4655 aa9.31□□□□□ -0.92
PRKN-201ENST00000338468 NUPR1O60356 82 aa9.3□□□□□ -0.92
PRKN-201ENST00000338468 SCO1O75880 301 aa9.29□□□□□ -0.92
PRKN-201ENST00000338468 UBE2BP63146 152 aa9.29□□□□□ -0.92
PRKN-201ENST00000338468 ODF1Q14990 250 aa9.29□□□□□ -0.92
PRKN-201ENST00000338468 TMEM223A0PJW6 202 aa9.28□□□□□ -0.92
PRKN-201ENST00000338468 REG3GQ6UW15 175 aa9.28□□□□□ -0.92
PRKN-201ENST00000338468 ZNF625Q96I27 306 aaPredicted RBP9.28□□□□□ -0.92
PRKN-201ENST00000338468 KRTAP10-8P60410 259 aa9.27□□□□□ -0.93
PRKN-201ENST00000338468 TP73-AS1Q9UF72 201 aa9.27□□□□□ -0.93
PRKN-201ENST00000338468 PFN2P35080 140 aa9.26□□□□□ -0.93
PRKN-201ENST00000338468 ERG28Q9UKR5 140 aa9.26□□□□□ -0.93
PRKN-201ENST00000338468 IGLV5-37A0A075B6J1 123 aa9.25□□□□□ -0.93
PRKN-201ENST00000338468 LEPROTL1O95214 131 aa9.25□□□□□ -0.93
PRKN-201ENST00000338468 LBHQ53QV2 105 aaPredicted RBP9.25□□□□□ -0.93
PRKN-201ENST00000338468 MRPL55Q7Z7F7 128 aaKnown RBP9.25□□□□□ -0.93
PRKN-201ENST00000338468 LINC00167Q96N53 147 aa9.24□□□□□ -0.93
PRKN-201ENST00000338468 H0Y8G0 127 aa9.23□□□□□ -0.93
PRKN-201ENST00000338468 H0Y9J4 135 aa9.23□□□□□ -0.93
PRKN-201ENST00000338468 DIRC1Q969H9 104 aa9.23□□□□□ -0.93
PRKN-201ENST00000338468 SND1-IT1Q9HBX3 110 aa9.23□□□□□ -0.93
PRKN-201ENST00000338468 COX17Q14061 63 aa9.22□□□□□ -0.93
PRKN-201ENST00000338468 Q8NDZ9 215 aa9.22□□□□□ -0.93
PRKN-201ENST00000338468 HIST1H2BKO60814 126 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 HIST1H2BJP06899 126 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 FABP4P15090 132 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 HIST1H2BOP23527 126 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 HIST1H2BBP33778 126 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 HIST1H2BDP58876 126 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 HIST1H2BCP62807 126 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 HIST2H2BEQ16778 126 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.21□□□□□ -0.94
PRKN-201ENST00000338468 SFTA2Q6UW10 78 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 HIST1H2BHQ93079 126 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 HIST1H2BNQ99877 126 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 HIST1H2BMQ99879 126 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 GAGE10A6NGK3 116 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms