RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 HELZ2Q9BYK8 2649 aaKnown RBP12.42□□□□□ -0.42
IFFO1-201ENST00000336604 PFN2P35080 140 aa12.42□□□□□ -0.42
IFFO1-201ENST00000336604 A0A087WZ39 114 aa12.41□□□□□ -0.42
IFFO1-201ENST00000336604 C11orf68Q9H3H3 251 aaKnown RBP12.41□□□□□ -0.42
IFFO1-201ENST00000336604 COX7CP15954 63 aa12.4□□□□□ -0.42
IFFO1-201ENST00000336604 CCL18P55774 89 aa12.4□□□□□ -0.42
IFFO1-201ENST00000336604 hADV29S1A0JD25 119 aa12.4□□□□□ -0.42
IFFO1-201ENST00000336604 RPL28P46779 137 aaKnown RBP12.4□□□□□ -0.42
IFFO1-201ENST00000336604 HILS1P60008 231 aa12.4□□□□□ -0.42
IFFO1-201ENST00000336604 HIVEP2P31629 2446 aa12.39□□□□□ -0.43
IFFO1-201ENST00000336604 LINC00959A0A1B0GUT2 108 aa12.39□□□□□ -0.43
IFFO1-201ENST00000336604 PF4P02776 101 aa12.39□□□□□ -0.43
IFFO1-201ENST00000336604 GYPEP15421 78 aa12.39□□□□□ -0.43
IFFO1-201ENST00000336604 IGKV3D-7A0A0C4DH55 119 aa12.39□□□□□ -0.43
IFFO1-201ENST00000336604 INAFM2P0DMQ5 153 aa12.39□□□□□ -0.43
IFFO1-201ENST00000336604 MALP21145 153 aa12.39□□□□□ -0.43
IFFO1-201ENST00000336604 C9orf129Q5T035 196 aaKnown RBP12.39□□□□□ -0.43
IFFO1-201ENST00000336604 FAM222AQ5U5X8 452 aa12.39□□□□□ -0.43
IFFO1-201ENST00000336604 A0A096LPF7 62 aa12.38□□□□□ -0.43
IFFO1-201ENST00000336604 XCL1P47992 114 aa12.38□□□□□ -0.43
IFFO1-201ENST00000336604 SMR3AQ99954 134 aa12.38□□□□□ -0.43
IFFO1-201ENST00000336604 CYSTM1Q9H1C7 97 aa12.38□□□□□ -0.43
IFFO1-201ENST00000336604 FASNP49327 2511 aaKnown RBP12.38□□□□□ -0.43
IFFO1-201ENST00000336604 KRTAP10-3P60369 221 aa12.38□□□□□ -0.43
IFFO1-201ENST00000336604 CLPSL2Q6UWE3 100 aa12.38□□□□□ -0.43
IFFO1-201ENST00000336604 SMIM11BQ8TCY0 68 aa12.38□□□□□ -0.43
IFFO1-201ENST00000336604 C14orf132Q9NPU4 83 aa12.38□□□□□ -0.43
IFFO1-201ENST00000336604 CXCL5P42830 114 aa12.37□□□□□ -0.43
IFFO1-201ENST00000336604 IBA57-AS1B1ANH7 110 aa12.37□□□□□ -0.43
IFFO1-201ENST00000336604 C2orf48Q96LS8 159 aa12.37□□□□□ -0.43
IFFO1-201ENST00000336604 DNAL4O96015 105 aa12.36□□□□□ -0.43
IFFO1-201ENST00000336604 ATP5G1P05496 136 aa12.36□□□□□ -0.43
IFFO1-201ENST00000336604 FAM19A5Q7Z5A7 132 aaPredicted RBP12.36□□□□□ -0.43
IFFO1-201ENST00000336604 J3KT08 172 aa12.36□□□□□ -0.43
IFFO1-201ENST00000336604 KIR2DL5BQ8NHK3 375 aa12.36□□□□□ -0.43
IFFO1-201ENST00000336604 A0A087WYN8 130 aa12.35□□□□□ -0.43
IFFO1-201ENST00000336604 C6orf226Q5I0X4 101 aa12.35□□□□□ -0.43
IFFO1-201ENST00000336604 A0A087WVE0 104 aa12.34□□□□□ -0.43
IFFO1-201ENST00000336604 LINC00612Q8N6U2 182 aa12.34□□□□□ -0.43
IFFO1-201ENST00000336604 X6R8D5 127 aa12.34□□□□□ -0.43
IFFO1-201ENST00000336604 PAX4O43316 350 aa12.34□□□□□ -0.43
IFFO1-201ENST00000336604 A0A1B0GX51 115 aa12.33□□□□□ -0.44
IFFO1-201ENST00000336604 ATOX1O00244 68 aa12.33□□□□□ -0.44
IFFO1-201ENST00000336604 LINC00482Q8N8I6 264 aa12.32□□□□□ -0.44
IFFO1-201ENST00000336604 SPATA3Q8NHX4 192 aa12.32□□□□□ -0.44
IFFO1-201ENST00000336604 NOTCH2Q04721 2471 aa12.32□□□□□ -0.44
IFFO1-201ENST00000336604 CRYGAP11844 174 aa12.32□□□□□ -0.44
IFFO1-201ENST00000336604 OR13C6PQ8NH95 151 aa12.31□□□□□ -0.44
IFFO1-201ENST00000336604 DEFB4AO15263 64 aa12.31□□□□□ -0.44
IFFO1-201ENST00000336604 PRO0255Q9UI72 69 aa12.31□□□□□ -0.44
IFFO1-201ENST00000336604 HIST1H4AP62805 103 aaKnown RBP12.3□□□□□ -0.44
IFFO1-201ENST00000336604 SS18Q15532 418 aa12.3□□□□□ -0.44
IFFO1-201ENST00000336604 LINC00846Q9NV44 126 aa12.3□□□□□ -0.44
IFFO1-201ENST00000336604 TENM1Q9UKZ4 2725 aa12.3□□□□□ -0.44
IFFO1-201ENST00000336604 A0A1B0GUV1 79 aa12.3□□□□□ -0.44
IFFO1-201ENST00000336604 RPL18AQ02543 176 aaKnown RBP12.29□□□□□ -0.44
IFFO1-201ENST00000336604 SMIM9A6NGZ8 99 aa12.29□□□□□ -0.44
IFFO1-201ENST00000336604 Q8N3U1 123 aa12.29□□□□□ -0.44
IFFO1-201ENST00000336604 NCR3O14931 201 aa12.28□□□□□ -0.44
IFFO1-201ENST00000336604 SLPIP03973 132 aa12.28□□□□□ -0.44
IFFO1-201ENST00000336604 LECT2O14960 151 aa12.27□□□□□ -0.44
IFFO1-201ENST00000336604 LINC00269Q8N2A0 174 aa12.27□□□□□ -0.45
IFFO1-201ENST00000336604 OTOGQ6ZRI0 2925 aa12.27□□□□□ -0.45
IFFO1-201ENST00000336604 Q8IZM0 81 aa12.26□□□□□ -0.45
IFFO1-201ENST00000336604 H0YGX0 51 aa12.26□□□□□ -0.45
IFFO1-201ENST00000336604 DEFB135Q30KP9 77 aa12.26□□□□□ -0.45
IFFO1-201ENST00000336604 C5orf47Q569G3 176 aa12.26□□□□□ -0.45
IFFO1-201ENST00000336604 HECTD1Q9ULT8 2610 aa12.26□□□□□ -0.45
IFFO1-201ENST00000336604 IGLV10-54A0A075B6I4 117 aa12.25□□□□□ -0.45
IFFO1-201ENST00000336604 PRR3P79522 188 aaKnown RBP12.25□□□□□ -0.45
IFFO1-201ENST00000336604 DSCR8Q96T75 97 aa12.25□□□□□ -0.45
IFFO1-201ENST00000336604 TRRAPQ9Y4A5 3859 aa12.24□□□□□ -0.45
IFFO1-201ENST00000336604 LINC01561Q8N1V8 128 aa12.23□□□□□ -0.45
IFFO1-201ENST00000336604 USP17L23D6RBM5 183 aa12.22□□□□□ -0.45
IFFO1-201ENST00000336604 LY6G6DO95868 133 aa12.22□□□□□ -0.45
IFFO1-201ENST00000336604 SERP2Q8N6R1 65 aa12.22□□□□□ -0.45
IFFO1-201ENST00000336604 ANGP03950 147 aaKnown RBP12.21□□□□□ -0.45
IFFO1-201ENST00000336604 Q6JHZ5 121 aa12.21□□□□□ -0.45
IFFO1-201ENST00000336604 KIAA0087Q14695 138 aa12.21□□□□□ -0.46
IFFO1-201ENST00000336604 CHCHD10Q8WYQ3 142 aaPredicted RBP12.21□□□□□ -0.46
IFFO1-201ENST00000336604 DPH3Q96FX2 82 aa12.21□□□□□ -0.46
IFFO1-201ENST00000336604 LYRM9A8MSI8 78 aa12.2□□□□□ -0.46
IFFO1-201ENST00000336604 C9orf116Q5BN46 136 aaPredicted RBP12.2□□□□□ -0.46
IFFO1-201ENST00000336604 WFDC9Q8NEX5 89 aa12.2□□□□□ -0.46
IFFO1-201ENST00000336604 CD164L2Q6UWJ8 174 aa12.2□□□□□ -0.46
IFFO1-201ENST00000336604 J3QKU1 62 aa12.19□□□□□ -0.46
IFFO1-201ENST00000336604 REG3AQ06141 175 aa12.19□□□□□ -0.46
IFFO1-201ENST00000336604 IGHV4-28A0A0C4DH34 117 aa12.18□□□□□ -0.46
IFFO1-201ENST00000336604 RPS28P62857 69 aaKnown RBP12.18□□□□□ -0.46
IFFO1-201ENST00000336604 OXTP01178 125 aa12.18□□□□□ -0.46
IFFO1-201ENST00000336604 NANOS2P60321 138 aaKnown RBP12.18□□□□□ -0.46
IFFO1-201ENST00000336604 UPK3BQ9BT76 320 aa12.18□□□□□ -0.46
IFFO1-201ENST00000336604 TMEM258P61165 79 aa12.17□□□□□ -0.46
IFFO1-201ENST00000336604 CELA1Q9UNI1 258 aa12.17□□□□□ -0.46
IFFO1-201ENST00000336604 ATRQ13535 2644 aa12.17□□□□□ -0.46
IFFO1-201ENST00000336604 NSD1Q96L73 2696 aaPredicted RBP12.17□□□□□ -0.46
IFFO1-201ENST00000336604 OBSCN-AS1Q96MR7 158 aa12.17□□□□□ -0.46
IFFO1-201ENST00000336604 DAD1P61803 113 aa12.16□□□□□ -0.46
IFFO1-201ENST00000336604 C9orf66Q5T8R8 295 aa12.16□□□□□ -0.46
IFFO1-201ENST00000336604 Q8NDZ9 215 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms