RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CDC42SE2Q9NRR3 84 aa11.76□□□□□ -0.53
CDC42EP4-201ENST00000335793 TRBV10-1A0A0K0K1A3 114 aa11.75□□□□□ -0.53
CDC42EP4-201ENST00000335793 C5orf38Q86SI9 138 aa11.75□□□□□ -0.53
CDC42EP4-201ENST00000335793 SERP2Q8N6R1 65 aa11.75□□□□□ -0.53
CDC42EP4-201ENST00000335793 BRK1Q8WUW1 75 aa11.75□□□□□ -0.53
CDC42EP4-201ENST00000335793 PRO0628Q9UI54 55 aa11.75□□□□□ -0.53
CDC42EP4-201ENST00000335793 MALP21145 153 aa11.75□□□□□ -0.53
CDC42EP4-201ENST00000335793 C14orf132Q9NPU4 83 aa11.75□□□□□ -0.53
CDC42EP4-201ENST00000335793 NBEAL2Q6ZNJ1 2754 aa11.74□□□□□ -0.53
CDC42EP4-201ENST00000335793 ATP5G1P05496 136 aa11.74□□□□□ -0.53
CDC42EP4-201ENST00000335793 DEFB121Q5J5C9 76 aa11.74□□□□□ -0.53
CDC42EP4-201ENST00000335793 SOSTDC1Q6X4U4 206 aa11.74□□□□□ -0.53
CDC42EP4-201ENST00000335793 C20orf197Q8N268 126 aa11.74□□□□□ -0.53
CDC42EP4-201ENST00000335793 DNAL4O96015 105 aa11.74□□□□□ -0.53
CDC42EP4-201ENST00000335793 HILS1P60008 231 aa11.74□□□□□ -0.53
CDC42EP4-201ENST00000335793 USP17L23D6RBM5 183 aa11.73□□□□□ -0.53
CDC42EP4-201ENST00000335793 CR1P17927 2039 aa11.73□□□□□ -0.53
CDC42EP4-201ENST00000335793 TRAV23DV6A0A075B6W5 121 aa11.73□□□□□ -0.53
CDC42EP4-201ENST00000335793 CRPP02741 224 aa11.73□□□□□ -0.53
CDC42EP4-201ENST00000335793 MIR7-3HGQ8N6C7 128 aa11.73□□□□□ -0.53
CDC42EP4-201ENST00000335793 IGLV5-45A0A087WSX0 123 aa11.72□□□□□ -0.53
CDC42EP4-201ENST00000335793 COX7A2LO14548 114 aa11.72□□□□□ -0.53
CDC42EP4-201ENST00000335793 IGLV5-39A0A0G2JS06 123 aa11.72□□□□□ -0.53
CDC42EP4-201ENST00000335793 F8WDY8 70 aa11.7□□□□□ -0.54
CDC42EP4-201ENST00000335793 A0A096LPF7 62 aa11.7□□□□□ -0.54
CDC42EP4-201ENST00000335793 SND1-IT1Q9HBX3 110 aa11.7□□□□□ -0.54
CDC42EP4-201ENST00000335793 MAST4O15021 2626 aa11.69□□□□□ -0.54
CDC42EP4-201ENST00000335793 PAX4O43316 350 aa11.69□□□□□ -0.54
CDC42EP4-201ENST00000335793 C9orf129Q5T035 196 aaKnown RBP11.69□□□□□ -0.54
CDC42EP4-201ENST00000335793 COX7B2Q8TF08 81 aa11.69□□□□□ -0.54
CDC42EP4-201ENST00000335793 CLPSL2Q6UWE3 100 aa11.69□□□□□ -0.54
CDC42EP4-201ENST00000335793 ESM1Q9NQ30 184 aa11.69□□□□□ -0.54
CDC42EP4-201ENST00000335793 CXCL5P42830 114 aa11.68□□□□□ -0.54
CDC42EP4-201ENST00000335793 C16orf74Q96GX8 76 aa11.68□□□□□ -0.54
CDC42EP4-201ENST00000335793 LINC01561Q8N1V8 128 aa11.68□□□□□ -0.54
CDC42EP4-201ENST00000335793 FAM218AQ96MZ4 157 aa11.68□□□□□ -0.54
CDC42EP4-201ENST00000335793 UPK3BQ9BT76 320 aa11.68□□□□□ -0.54
CDC42EP4-201ENST00000335793 V9GYY9 64 aa11.68□□□□□ -0.54
CDC42EP4-201ENST00000335793 ZNF469Q96JG9 3925 aaPredicted RBP11.67□□□□□ -0.54
CDC42EP4-201ENST00000335793 C6orf226Q5I0X4 101 aa11.67□□□□□ -0.54
CDC42EP4-201ENST00000335793 LINC00846Q9NV44 126 aa11.67□□□□□ -0.54
CDC42EP4-201ENST00000335793 IGLV4-60A0A075B6I1 120 aa11.67□□□□□ -0.54
CDC42EP4-201ENST00000335793 GHRHP01286 108 aa11.66□□□□□ -0.54
CDC42EP4-201ENST00000335793 TRAV13-2A0A0B4J235 113 aa11.65□□□□□ -0.54
CDC42EP4-201ENST00000335793 XCL1P47992 114 aa11.65□□□□□ -0.54
CDC42EP4-201ENST00000335793 LINC01006Q8NI28 216 aa11.65□□□□□ -0.54
CDC42EP4-201ENST00000335793 LINC01600Q96MT4 127 aa11.64□□□□□ -0.55
CDC42EP4-201ENST00000335793 TMEM86BQ8N661 226 aa11.64□□□□□ -0.55
CDC42EP4-201ENST00000335793 LINC00474Q9P2X8 69 aa11.63□□□□□ -0.55
CDC42EP4-201ENST00000335793 TRBV6-8A0A0A6YYG3 113 aa11.62□□□□□ -0.55
CDC42EP4-201ENST00000335793 CMC4P56277 68 aaPredicted RBP11.62□□□□□ -0.55
CDC42EP4-201ENST00000335793 C1orf195Q5TG92 126 aa11.62□□□□□ -0.55
CDC42EP4-201ENST00000335793 TRBV6-4A0A1B0GX49 114 aa11.62□□□□□ -0.55
CDC42EP4-201ENST00000335793 SNURFQ9Y675 71 aa11.62□□□□□ -0.55
CDC42EP4-201ENST00000335793 IL17DQ8TAD2 202 aa11.62□□□□□ -0.55
CDC42EP4-201ENST00000335793 PF4P02776 101 aa11.61□□□□□ -0.55
CDC42EP4-201ENST00000335793 INAFM2P0DMQ5 153 aa11.61□□□□□ -0.55
CDC42EP4-201ENST00000335793 NCR3O14931 201 aa11.61□□□□□ -0.55
CDC42EP4-201ENST00000335793 GIG44P09565 113 aaPredicted RBP11.61□□□□□ -0.55
CDC42EP4-201ENST00000335793 LINC00337Q8N6G1 96 aa11.61□□□□□ -0.55
CDC42EP4-201ENST00000335793 SLPIP03973 132 aa11.6□□□□□ -0.55
CDC42EP4-201ENST00000335793 GYPEP15421 78 aa11.6□□□□□ -0.55
CDC42EP4-201ENST00000335793 MPLKIPQ8TAP9 179 aa11.6□□□□□ -0.55
CDC42EP4-201ENST00000335793 F8P00451 2351 aa11.6□□□□□ -0.55
CDC42EP4-201ENST00000335793 RNASE1P07998 156 aaKnown RBP11.59□□□□□ -0.55
CDC42EP4-201ENST00000335793 FAM19A1Q7Z5A9 133 aa11.59□□□□□ -0.55
CDC42EP4-201ENST00000335793 SS18Q15532 418 aa11.59□□□□□ -0.55
CDC42EP4-201ENST00000335793 C22orf24Q9Y442 160 aa11.59□□□□□ -0.55
CDC42EP4-201ENST00000335793 CCL18P55774 89 aa11.58□□□□□ -0.56
CDC42EP4-201ENST00000335793 SMIM11BQ8TCY0 68 aa11.58□□□□□ -0.56
CDC42EP4-201ENST00000335793 LECT2O14960 151 aa11.57□□□□□ -0.56
CDC42EP4-201ENST00000335793 RPL28P46779 137 aaKnown RBP11.57□□□□□ -0.56
CDC42EP4-201ENST00000335793 DEFB4AO15263 64 aa11.57□□□□□ -0.56
CDC42EP4-201ENST00000335793 S100A7L2Q5SY68 101 aa11.57□□□□□ -0.56
CDC42EP4-201ENST00000335793 IGLV10-54A0A075B6I4 117 aa11.56□□□□□ -0.56
CDC42EP4-201ENST00000335793 PLAC8L1A1L4L8 177 aa11.56□□□□□ -0.56
CDC42EP4-201ENST00000335793 RBM3P98179 157 aaKnown RBP11.56□□□□□ -0.56
CDC42EP4-201ENST00000335793 ENHOQ6UWT2 76 aa11.56□□□□□ -0.56
CDC42EP4-201ENST00000335793 OTOGQ6ZRI0 2925 aa11.56□□□□□ -0.56
CDC42EP4-201ENST00000335793 IGLV1-51P01701 117 aa11.56□□□□□ -0.56
CDC42EP4-201ENST00000335793 A0A087WYN8 130 aa11.55□□□□□ -0.56
CDC42EP4-201ENST00000335793 KRTAP1-3Q8IUG1 177 aa11.55□□□□□ -0.56
CDC42EP4-201ENST00000335793 IGHV3OR16-9A0A0B4J2B5 98 aa11.55□□□□□ -0.56
CDC42EP4-201ENST00000335793 IGKV2-28A0A075B6P5 120 aa11.54□□□□□ -0.56
CDC42EP4-201ENST00000335793 IGKV2D-28P01615 120 aa11.54□□□□□ -0.56
CDC42EP4-201ENST00000335793 FAM19A3Q7Z5A8 133 aa11.54□□□□□ -0.56
CDC42EP4-201ENST00000335793 LINC00959A0A1B0GUT2 108 aa11.54□□□□□ -0.56
CDC42EP4-201ENST00000335793 LINC00482Q8N8I6 264 aa11.54□□□□□ -0.56
CDC42EP4-201ENST00000335793 HTN3P15516 51 aa11.52□□□□□ -0.56
CDC42EP4-201ENST00000335793 IBA57-AS1B1ANH7 110 aa11.52□□□□□ -0.57
CDC42EP4-201ENST00000335793 PDZD2O15018 2839 aa11.52□□□□□ -0.57
CDC42EP4-201ENST00000335793 HIVEP1P15822 2718 aa11.52□□□□□ -0.57
CDC42EP4-201ENST00000335793 FP248Q71RG6 208 aaPredicted RBP11.52□□□□□ -0.57
CDC42EP4-201ENST00000335793 OVOL2Q9BRP0 275 aa11.52□□□□□ -0.57
CDC42EP4-201ENST00000335793 A0A087WZ39 114 aa11.51□□□□□ -0.57
CDC42EP4-201ENST00000335793 PRR3P79522 188 aaKnown RBP11.51□□□□□ -0.57
CDC42EP4-201ENST00000335793 RMI2Q96E14 147 aa11.51□□□□□ -0.57
CDC42EP4-201ENST00000335793 H0YGX0 51 aa11.5□□□□□ -0.57
CDC42EP4-201ENST00000335793 FAM222AQ5U5X8 452 aa11.5□□□□□ -0.57
CDC42EP4-201ENST00000335793 CSNK1G2-AS1Q8NCQ2 148 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms