RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 TRBV6-8A0A0A6YYG3 113 aa16.54■□□□□ 0.24
TSKU-201ENST00000333090 HIST1H4AP62805 103 aaKnown RBP16.53■□□□□ 0.24
TSKU-201ENST00000333090 KRTAP1-3Q8IUG1 177 aa16.53■□□□□ 0.24
TSKU-201ENST00000333090 A0A087WZ39 114 aa16.53■□□□□ 0.24
TSKU-201ENST00000333090 ATOX1O00244 68 aa16.53■□□□□ 0.24
TSKU-201ENST00000333090 C2orf48Q96LS8 159 aa16.53■□□□□ 0.24
TSKU-201ENST00000333090 OBSCN-AS1Q96MR7 158 aa16.51■□□□□ 0.23
TSKU-201ENST00000333090 C6orf226Q5I0X4 101 aa16.5■□□□□ 0.23
TSKU-201ENST00000333090 A0A087WVE0 104 aa16.48■□□□□ 0.23
TSKU-201ENST00000333090 RPL18AQ02543 176 aaKnown RBP16.47■□□□□ 0.23
TSKU-201ENST00000333090 FHL2Q14192 279 aa16.47■□□□□ 0.23
TSKU-201ENST00000333090 hADV29S1A0JD25 119 aa16.47■□□□□ 0.23
TSKU-201ENST00000333090 Q6JHZ5 121 aa16.47■□□□□ 0.23
TSKU-201ENST00000333090 A0A1B0GX51 115 aa16.46■□□□□ 0.23
TSKU-201ENST00000333090 LOC107984640A0A0U1RRK4 108 aa16.46■□□□□ 0.22
TSKU-201ENST00000333090 LINC00959A0A1B0GUT2 108 aa16.46■□□□□ 0.22
TSKU-201ENST00000333090 CRYGAP11844 174 aa16.46■□□□□ 0.22
TSKU-201ENST00000333090 ORMDL1Q9P0S3 153 aa16.46■□□□□ 0.22
TSKU-201ENST00000333090 XCL1P47992 114 aa16.45■□□□□ 0.22
TSKU-201ENST00000333090 FN1P02751 2386 aaKnown RBP16.45■□□□□ 0.22
TSKU-201ENST00000333090 ESM1Q9NQ30 184 aa16.44■□□□□ 0.22
TSKU-201ENST00000333090 PDZD2O15018 2839 aa16.43■□□□□ 0.22
TSKU-201ENST00000333090 HELZ2Q9BYK8 2649 aaKnown RBP16.42■□□□□ 0.22
TSKU-201ENST00000333090 CYSTM1Q9H1C7 97 aa16.42■□□□□ 0.22
TSKU-201ENST00000333090 DNAJC9-AS1A6NH13 148 aa16.41■□□□□ 0.22
TSKU-201ENST00000333090 LY6G6DO95868 133 aa16.41■□□□□ 0.22
TSKU-201ENST00000333090 SS18Q15532 418 aa16.41■□□□□ 0.22
TSKU-201ENST00000333090 CLPSL2Q6UWE3 100 aa16.41■□□□□ 0.22
TSKU-201ENST00000333090 CSNK1G2-AS1Q8NCQ2 148 aa16.41■□□□□ 0.22
TSKU-201ENST00000333090 DEFB130BP0DP73 79 aa16.4■□□□□ 0.22
TSKU-201ENST00000333090 DEFB130AP0DP74 79 aa16.4■□□□□ 0.22
TSKU-201ENST00000333090 TMEM86BQ8N661 226 aa16.4■□□□□ 0.22
TSKU-201ENST00000333090 PRR3P79522 188 aaKnown RBP16.39■□□□□ 0.22
TSKU-201ENST00000333090 LINC01561Q8N1V8 128 aa16.39■□□□□ 0.22
TSKU-201ENST00000333090 ANK3Q12955 4377 aaKnown RBP16.39■□□□□ 0.21
TSKU-201ENST00000333090 CMC4P56277 68 aaPredicted RBP16.37■□□□□ 0.21
TSKU-201ENST00000333090 C19orf73Q9NVV2 129 aa16.37■□□□□ 0.21
TSKU-201ENST00000333090 USP17L23D6RBM5 183 aa16.37■□□□□ 0.21
TSKU-201ENST00000333090 J3KT08 172 aa16.36■□□□□ 0.21
TSKU-201ENST00000333090 SERP2Q8N6R1 65 aa16.36■□□□□ 0.21
TSKU-201ENST00000333090 NOTCH2Q04721 2471 aa16.36■□□□□ 0.21
TSKU-201ENST00000333090 CCKP06307 115 aa16.36■□□□□ 0.21
TSKU-201ENST00000333090 CFAP161Q6P656 301 aa16.36■□□□□ 0.21
TSKU-201ENST00000333090 GYPEP15421 78 aa16.34■□□□□ 0.21
TSKU-201ENST00000333090 Q8IZM0 81 aa16.34■□□□□ 0.21
TSKU-201ENST00000333090 FASNP49327 2511 aaKnown RBP16.34■□□□□ 0.21
TSKU-201ENST00000333090 NANOS2P60321 138 aaKnown RBP16.33■□□□□ 0.2
TSKU-201ENST00000333090 NBEAL2Q6ZNJ1 2754 aa16.33■□□□□ 0.2
TSKU-201ENST00000333090 Q8N814 137 aa16.32■□□□□ 0.2
TSKU-201ENST00000333090 A0A096LPF7 62 aa16.32■□□□□ 0.2
TSKU-201ENST00000333090 IGLV1-51P01701 117 aa16.31■□□□□ 0.2
TSKU-201ENST00000333090 JMJD7-PLA2G4BH0Y9G9 81 aa16.3■□□□□ 0.2
TSKU-201ENST00000333090 RNASE1P07998 156 aaKnown RBP16.3■□□□□ 0.2
TSKU-201ENST00000333090 WFDC9Q8NEX5 89 aa16.3■□□□□ 0.2
TSKU-201ENST00000333090 UNC79Q9P2D8 2635 aa16.29■□□□□ 0.2
TSKU-201ENST00000333090 LINC00167Q96N53 147 aa16.29■□□□□ 0.2
TSKU-201ENST00000333090 HILS1P60008 231 aa16.29■□□□□ 0.2
TSKU-201ENST00000333090 HECTD1Q9ULT8 2610 aa16.29■□□□□ 0.2
TSKU-201ENST00000333090 UPK3BQ9BT76 320 aa16.28■□□□□ 0.2
TSKU-201ENST00000333090 GCN1Q92616 2671 aaKnown RBP16.28■□□□□ 0.2
TSKU-201ENST00000333090 TMEM256-PLSCR3K7ERE1 68 aa16.28■□□□□ 0.2
TSKU-201ENST00000333090 FAM19A5Q7Z5A7 132 aaPredicted RBP16.28■□□□□ 0.2
TSKU-201ENST00000333090 VWFP04275 2813 aa16.28■□□□□ 0.2
TSKU-201ENST00000333090 A0A1B0GUV1 79 aa16.27■□□□□ 0.19
TSKU-201ENST00000333090 S100A7L2Q5SY68 101 aa16.26■□□□□ 0.19
TSKU-201ENST00000333090 LINC01006Q8NI28 216 aa16.25■□□□□ 0.19
TSKU-201ENST00000333090 C9orf116Q5BN46 136 aaPredicted RBP16.25■□□□□ 0.19
TSKU-201ENST00000333090 KIR2DL5BQ8NHK3 375 aa16.25■□□□□ 0.19
TSKU-201ENST00000333090 TMEM258P61165 79 aa16.24■□□□□ 0.19
TSKU-201ENST00000333090 SMR3AQ99954 134 aa16.24■□□□□ 0.19
TSKU-201ENST00000333090 IGLV10-54A0A075B6I4 117 aa16.23■□□□□ 0.19
TSKU-201ENST00000333090 LINC00269Q8N2A0 174 aa16.23■□□□□ 0.19
TSKU-201ENST00000333090 C6orf99Q4VX62 202 aa16.23■□□□□ 0.19
TSKU-201ENST00000333090 KRTAP1-1Q07627 177 aa16.22■□□□□ 0.19
TSKU-201ENST00000333090 FAM19A1Q7Z5A9 133 aa16.22■□□□□ 0.19
TSKU-201ENST00000333090 TRAV23DV6A0A075B6W5 121 aa16.22■□□□□ 0.19
TSKU-201ENST00000333090 NDUFC2O95298 119 aa16.22■□□□□ 0.19
TSKU-201ENST00000333090 RPS28P62857 69 aaKnown RBP16.22■□□□□ 0.19
TSKU-201ENST00000333090 KIAA0087Q14695 138 aa16.22■□□□□ 0.19
TSKU-201ENST00000333090 ENHOQ6UWT2 76 aa16.22■□□□□ 0.19
TSKU-201ENST00000333090 GHRHP01286 108 aa16.19■□□□□ 0.18
TSKU-201ENST00000333090 DPH3Q96FX2 82 aa16.19■□□□□ 0.18
TSKU-201ENST00000333090 ATP5EP2Q5VTU8 51 aa16.19■□□□□ 0.18
TSKU-201ENST00000333090 Q8NDZ9 215 aa16.19■□□□□ 0.18
TSKU-201ENST00000333090 DSCR8Q96T75 97 aa16.19■□□□□ 0.18
TSKU-201ENST00000333090 COX17Q14061 63 aa16.18■□□□□ 0.18
TSKU-201ENST00000333090 Q8N3U1 123 aa16.18■□□□□ 0.18
TSKU-201ENST00000333090 CHCHD10Q8WYQ3 142 aaPredicted RBP16.18■□□□□ 0.18
TSKU-201ENST00000333090 PRO0255Q9UI72 69 aa16.18■□□□□ 0.18
TSKU-201ENST00000333090 CD164L2Q6UWJ8 174 aa16.18■□□□□ 0.18
TSKU-201ENST00000333090 UBL5Q9BZL1 73 aa16.18■□□□□ 0.18
TSKU-201ENST00000333090 LINC00612Q8N6U2 182 aa16.17■□□□□ 0.18
TSKU-201ENST00000333090 HIVEP2P31629 2446 aa16.16■□□□□ 0.18
TSKU-201ENST00000333090 ANGP03950 147 aaKnown RBP16.16■□□□□ 0.18
TSKU-201ENST00000333090 OTOGQ6ZRI0 2925 aa16.14■□□□□ 0.17
TSKU-201ENST00000333090 SMIM9A6NGZ8 99 aa16.13■□□□□ 0.17
TSKU-201ENST00000333090 LYPD5Q6UWN5 251 aa16.13■□□□□ 0.17
TSKU-201ENST00000333090 REG3AQ06141 175 aa16.12■□□□□ 0.17
TSKU-201ENST00000333090 LINC00575Q6W349 94 aa16.12■□□□□ 0.17
TSKU-201ENST00000333090 IGHV4-28A0A0C4DH34 117 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms