RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 CFAP161Q6P656 301 aa9.59□□□□□ -0.87
TSPO-201ENST00000329563 KRTAP26-1Q6PEX3 210 aa9.59□□□□□ -0.87
TSPO-201ENST00000329563 CDKN2A-AS1Q9UH64 79 aa9.59□□□□□ -0.87
TSPO-201ENST00000329563 ZNF22P17026 224 aaPredicted RBP9.58□□□□□ -0.88
TSPO-201ENST00000329563 HERVK_113P61574 105 aa9.58□□□□□ -0.88
TSPO-201ENST00000329563 C14orf177Q52M58 125 aa9.58□□□□□ -0.88
TSPO-201ENST00000329563 LOC105371267A0A1B0GV96 52 aa9.57□□□□□ -0.88
TSPO-201ENST00000329563 C5orf38Q86SI9 138 aa9.57□□□□□ -0.88
TSPO-201ENST00000329563 HSBP1L1C9JCN9 74 aa9.56□□□□□ -0.88
TSPO-201ENST00000329563 IGHV1-58A0A0C4DH39 117 aa9.55□□□□□ -0.88
TSPO-201ENST00000329563 KRTAP29-1A8MX34 341 aaPredicted RBP9.55□□□□□ -0.88
TSPO-201ENST00000329563 TMEM223A0PJW6 202 aa9.54□□□□□ -0.88
TSPO-201ENST00000329563 PYY3Q5JQD4 70 aa9.54□□□□□ -0.88
TSPO-201ENST00000329563 SCXQ7RTU7 201 aa9.54□□□□□ -0.88
TSPO-201ENST00000329563 IGHV3-64A0A075B6Q5 118 aa9.53□□□□□ -0.88
TSPO-201ENST00000329563 SMIM1B2RUZ4 78 aa9.53□□□□□ -0.88
TSPO-201ENST00000329563 SPINK8P0C7L1 97 aa9.52□□□□□ -0.89
TSPO-201ENST00000329563 ATOH7Q8N100 152 aa9.52□□□□□ -0.89
TSPO-201ENST00000329563 IGLV5-39A0A0G2JS06 123 aa9.51□□□□□ -0.89
TSPO-201ENST00000329563 E9PLD3 99 aa9.51□□□□□ -0.89
TSPO-201ENST00000329563 F8WDY8 70 aa9.51□□□□□ -0.89
TSPO-201ENST00000329563 PRSS2P07478 247 aa9.51□□□□□ -0.89
TSPO-201ENST00000329563 SMIM6P0DI80 62 aa9.51□□□□□ -0.89
TSPO-201ENST00000329563 KRTAP10-4P60372 401 aaPredicted RBP9.51□□□□□ -0.89
TSPO-201ENST00000329563 PLEKHB2Q96CS7 222 aa9.51□□□□□ -0.89
TSPO-201ENST00000329563 USP17L23D6RBM5 183 aa9.5□□□□□ -0.89
TSPO-201ENST00000329563 ZNF561-AS1K7EIQ3 104 aa9.5□□□□□ -0.89
TSPO-201ENST00000329563 SFTA2Q6UW10 78 aa9.5□□□□□ -0.89
TSPO-201ENST00000329563 Q8IZM0 81 aa9.5□□□□□ -0.89
TSPO-201ENST00000329563 STPG4Q8N801 248 aa9.5□□□□□ -0.89
TSPO-201ENST00000329563 CIRBP-AS1Q8TBR5 109 aa9.5□□□□□ -0.89
TSPO-201ENST00000329563 ORAOV1Q8WV07 137 aa9.5□□□□□ -0.89
TSPO-201ENST00000329563 GVQW2A0A096LPI5 108 aaPredicted RBP9.49□□□□□ -0.89
TSPO-201ENST00000329563 LEPROTO15243 131 aa9.49□□□□□ -0.89
TSPO-201ENST00000329563 S100A12P80511 92 aa9.49□□□□□ -0.89
TSPO-201ENST00000329563 C6orf226Q5I0X4 101 aa9.49□□□□□ -0.89
TSPO-201ENST00000329563 SERTAD4-AS1Q5TG53 156 aa9.49□□□□□ -0.89
TSPO-201ENST00000329563 COX7B2Q8TF08 81 aa9.49□□□□□ -0.89
TSPO-201ENST00000329563 VAMP8Q9BV40 100 aa9.49□□□□□ -0.89
TSPO-201ENST00000329563 hDV102S1A0JD36 115 aa9.48□□□□□ -0.89
TSPO-201ENST00000329563 CXCL5P42830 114 aa9.48□□□□□ -0.89
TSPO-201ENST00000329563 SPAG11BQ08648 103 aa9.48□□□□□ -0.89
TSPO-201ENST00000329563 C15orf56Q8N910 161 aa9.48□□□□□ -0.89
TSPO-201ENST00000329563 TOMM7Q9P0U1 55 aa9.48□□□□□ -0.89
TSPO-201ENST00000329563 J3QQQ9 107 aa9.47□□□□□ -0.89
TSPO-201ENST00000329563 OXTP01178 125 aa9.47□□□□□ -0.89
TSPO-201ENST00000329563 LGALS3P17931 250 aaKnown RBP9.47□□□□□ -0.89
TSPO-201ENST00000329563 CKS1BP61024 79 aa9.47□□□□□ -0.89
TSPO-201ENST00000329563 C2orf48Q96LS8 159 aa9.47□□□□□ -0.89
TSPO-201ENST00000329563 NMUP48645 174 aa9.46□□□□□ -0.9
TSPO-201ENST00000329563 PANO1I0J062 215 aa9.45□□□□□ -0.9
TSPO-201ENST00000329563 KIAA0087Q14695 138 aa9.45□□□□□ -0.9
TSPO-201ENST00000329563 ANKRD39Q53RE8 183 aa9.45□□□□□ -0.9
TSPO-201ENST00000329563 MYMXA0A1B0GTQ4 84 aa9.44□□□□□ -0.9
TSPO-201ENST00000329563 MAJINQ3KP22 176 aa9.44□□□□□ -0.9
TSPO-201ENST00000329563 HIGD2BQ4VC39 106 aa9.44□□□□□ -0.9
TSPO-201ENST00000329563 SPATA45Q537H7 98 aa9.44□□□□□ -0.9
TSPO-201ENST00000329563 PAM16Q9Y3D7 125 aa9.44□□□□□ -0.9
TSPO-201ENST00000329563 NDUFA1O15239 70 aa9.43□□□□□ -0.9
TSPO-201ENST00000329563 HERV-K104P63124 156 aa9.43□□□□□ -0.9
TSPO-201ENST00000329563 C9orf163Q8N9P6 203 aa9.43□□□□□ -0.9
TSPO-201ENST00000329563 CAMK2N2Q96S95 79 aa9.43□□□□□ -0.9
TSPO-201ENST00000329563 NDUFA12Q9UI09 145 aa9.43□□□□□ -0.9
TSPO-201ENST00000329563 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.43□□□□□ -0.9
TSPO-201ENST00000329563 LRP1Q07954 4544 aaKnown RBP9.42□□□□□ -0.9
TSPO-201ENST00000329563 IGKV2D-26A0A0A0MRZ7 120 aa9.42□□□□□ -0.9
TSPO-201ENST00000329563 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.42□□□□□ -0.9
TSPO-201ENST00000329563 LINC00587B1AMM8 73 aa9.42□□□□□ -0.9
TSPO-201ENST00000329563 SLPIP03973 132 aa9.42□□□□□ -0.9
TSPO-201ENST00000329563 RPL37AP61513 92 aaKnown RBP9.42□□□□□ -0.9
TSPO-201ENST00000329563 SYCNQ0VAF6 134 aa9.41□□□□□ -0.9
TSPO-201ENST00000329563 TRBV30A0A0K0K1B3 111 aa9.4□□□□□ -0.9
TSPO-201ENST00000329563 CNBPP62633 177 aaKnown RBP9.4□□□□□ -0.9
TSPO-201ENST00000329563 RNF151Q2KHN1 245 aa9.4□□□□□ -0.9
TSPO-201ENST00000329563 SDIM1Q6ZPB5 146 aa9.4□□□□□ -0.9
TSPO-201ENST00000329563 ZNF625Q96I27 306 aaPredicted RBP9.4□□□□□ -0.9
TSPO-201ENST00000329563 C12orf57Q99622 126 aa9.4□□□□□ -0.9
TSPO-201ENST00000329563 FAT3Q8TDW7 4589 aa9.4□□□□□ -0.91
TSPO-201ENST00000329563 ZNF815PA8K554 130 aa9.39□□□□□ -0.91
TSPO-201ENST00000329563 DLEU1O43261 78 aa9.39□□□□□ -0.91
TSPO-201ENST00000329563 COX8AP10176 69 aa9.39□□□□□ -0.91
TSPO-201ENST00000329563 TSPEAR-AS2P59090 65 aa9.39□□□□□ -0.91
TSPO-201ENST00000329563 C2orf82Q6UX34 121 aa9.39□□□□□ -0.91
TSPO-201ENST00000329563 PKIGQ9Y2B9 76 aa9.39□□□□□ -0.91
TSPO-201ENST00000329563 UNQ6190/PRO20217Q6UXQ8 127 aa9.38□□□□□ -0.91
TSPO-201ENST00000329563 LINC00526Q96FQ7 95 aa9.38□□□□□ -0.91
TSPO-201ENST00000329563 CARD19Q96LW7 228 aa9.38□□□□□ -0.91
TSPO-201ENST00000329563 PKHD1L1Q86WI1 4243 aa9.37□□□□□ -0.91
TSPO-201ENST00000329563 HNRNPA3P51991 378 aaKnown RBP9.37□□□□□ -0.91
TSPO-201ENST00000329563 CIRBPQ14011 172 aaKnown RBP9.37□□□□□ -0.91
TSPO-201ENST00000329563 COX17Q14061 63 aa9.37□□□□□ -0.91
TSPO-201ENST00000329563 SLC25A34Q6PIV7 304 aa9.37□□□□□ -0.91
TSPO-201ENST00000329563 Q6ZRU5 148 aa9.37□□□□□ -0.91
TSPO-201ENST00000329563 PCP2Q8IVA1 136 aa9.37□□□□□ -0.91
TSPO-201ENST00000329563 BOD1L2Q8IYS8 172 aa9.37□□□□□ -0.91
TSPO-201ENST00000329563 LINC00518Q8N0U6 118 aa9.37□□□□□ -0.91
TSPO-201ENST00000329563 HMCN2Q8NDA2 5059 aa9.36□□□□□ -0.91
TSPO-201ENST00000329563 SCGB1D4Q6XE38 83 aa9.36□□□□□ -0.91
TSPO-201ENST00000329563 PLA2G2DQ9UNK4 145 aa9.36□□□□□ -0.91
TSPO-201ENST00000329563 C10orf25Q5T742 122 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms