RNA–Protein interactions for RNA: ENST00000321331.11

HIGD1A-201, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1A, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-201ENST00000321331 C6orf48Q9UBA6 75 aa12.53□□□□□ -0.4
HIGD1A-201ENST00000321331 TRBV30A0A0K0K1B3 111 aa12.52□□□□□ -0.41
HIGD1A-201ENST00000321331 TRGC2P03986 189 aa12.52□□□□□ -0.41
HIGD1A-201ENST00000321331 CKS1BP61024 79 aa12.52□□□□□ -0.41
HIGD1A-201ENST00000321331 PDZD11Q5EBL8 140 aa12.52□□□□□ -0.41
HIGD1A-201ENST00000321331 C6orf226Q5I0X4 101 aa12.52□□□□□ -0.41
HIGD1A-201ENST00000321331 IGLV5-45A0A087WSX0 123 aa12.51□□□□□ -0.41
HIGD1A-201ENST00000321331 KRTAP10-4P60372 401 aaPredicted RBP12.51□□□□□ -0.41
HIGD1A-201ENST00000321331 TLX1NBP0CAT3 122 aa12.5□□□□□ -0.41
HIGD1A-201ENST00000321331 C2orf82Q6UX34 121 aa12.5□□□□□ -0.41
HIGD1A-201ENST00000321331 BAGE3Q86Y29 109 aa12.5□□□□□ -0.41
HIGD1A-201ENST00000321331 H3BRM9 83 aa12.48□□□□□ -0.41
HIGD1A-201ENST00000321331 FLG2Q5D862 2391 aaPredicted RBP12.48□□□□□ -0.41
HIGD1A-201ENST00000321331 SMIM1B2RUZ4 78 aa12.47□□□□□ -0.41
HIGD1A-201ENST00000321331 HSBP1O75506 76 aa12.47□□□□□ -0.41
HIGD1A-201ENST00000321331 IGLC3P0DOY3 106 aa12.46□□□□□ -0.41
HIGD1A-201ENST00000321331 CXCL5P42830 114 aa12.46□□□□□ -0.41
HIGD1A-201ENST00000321331 Q6ZRP5 223 aa12.46□□□□□ -0.41
HIGD1A-201ENST00000321331 A0A1W2PNN7 141 aa12.44□□□□□ -0.42
HIGD1A-201ENST00000321331 NDUFC2-KCTD14E9PQ53 114 aa12.44□□□□□ -0.42
HIGD1A-201ENST00000321331 SPINK8P0C7L1 97 aa12.44□□□□□ -0.42
HIGD1A-201ENST00000321331 GAGE2EQ4V326 116 aa12.44□□□□□ -0.42
HIGD1A-201ENST00000321331 C9orf116Q5BN46 136 aaPredicted RBP12.44□□□□□ -0.42
HIGD1A-201ENST00000321331 COX7B2Q8TF08 81 aa12.44□□□□□ -0.42
HIGD1A-201ENST00000321331 GAGE2DQ9UEU5 116 aa12.44□□□□□ -0.42
HIGD1A-201ENST00000321331 MYCBP2O75592 4640 aa12.44□□□□□ -0.42
HIGD1A-201ENST00000321331 F8VRH5 84 aa12.43□□□□□ -0.42
HIGD1A-201ENST00000321331 FAM19A2Q8N3H0 131 aa12.42□□□□□ -0.42
HIGD1A-201ENST00000321331 IFI27L1Q96BM0 104 aa12.42□□□□□ -0.42
HIGD1A-201ENST00000321331 ZNF22P17026 224 aaPredicted RBP12.41□□□□□ -0.42
HIGD1A-201ENST00000321331 CHTOPQ9Y3Y2 248 aaKnown RBP12.41□□□□□ -0.42
HIGD1A-201ENST00000321331 TRAV12-1A0A0B4J245 112 aa12.39□□□□□ -0.43
HIGD1A-201ENST00000321331 SERF1AO75920 110 aa12.39□□□□□ -0.43
HIGD1A-201ENST00000321331 C11orf86A6NJI1 115 aa12.38□□□□□ -0.43
HIGD1A-201ENST00000321331 HNRNPA3P51991 378 aaKnown RBP12.38□□□□□ -0.43
HIGD1A-201ENST00000321331 PRR3P79522 188 aaKnown RBP12.38□□□□□ -0.43
HIGD1A-201ENST00000321331 TMEM170BQ5T4T1 132 aa12.38□□□□□ -0.43
HIGD1A-201ENST00000321331 IGLV5-39A0A0G2JS06 123 aa12.37□□□□□ -0.43
HIGD1A-201ENST00000321331 PKHD1L1Q86WI1 4243 aa12.36□□□□□ -0.43
HIGD1A-201ENST00000321331 FAM168BA1KXE4 195 aa12.36□□□□□ -0.43
HIGD1A-201ENST00000321331 LEPROTL1O95214 131 aa12.36□□□□□ -0.43
HIGD1A-201ENST00000321331 LINC00310P59036 64 aa12.36□□□□□ -0.43
HIGD1A-201ENST00000321331 FAM19A5Q7Z5A7 132 aaPredicted RBP12.36□□□□□ -0.43
HIGD1A-201ENST00000321331 DMBT1Q9UGM3 2413 aaPredicted RBP12.36□□□□□ -0.43
HIGD1A-201ENST00000321331 PHF5AQ7RTV0 110 aaKnown RBP12.35□□□□□ -0.43
HIGD1A-201ENST00000321331 KRTAP29-1A8MX34 341 aaPredicted RBP12.34□□□□□ -0.43
HIGD1A-201ENST00000321331 J3QL48 77 aa12.34□□□□□ -0.43
HIGD1A-201ENST00000321331 C9orf129Q5T035 196 aaKnown RBP12.34□□□□□ -0.43
HIGD1A-201ENST00000321331 HIST1H2BKO60814 126 aa12.32□□□□□ -0.44
HIGD1A-201ENST00000321331 HIST1H2BJP06899 126 aa12.32□□□□□ -0.44
HIGD1A-201ENST00000321331 HIST1H2BOP23527 126 aa12.32□□□□□ -0.44
HIGD1A-201ENST00000321331 HIST1H2BBP33778 126 aa12.32□□□□□ -0.44
HIGD1A-201ENST00000321331 HIST1H2BDP58876 126 aa12.32□□□□□ -0.44
HIGD1A-201ENST00000321331 HIST1H2BCP62807 126 aa12.32□□□□□ -0.44
HIGD1A-201ENST00000321331 HIST2H2BEQ16778 126 aa12.32□□□□□ -0.44
HIGD1A-201ENST00000321331 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.32□□□□□ -0.44
HIGD1A-201ENST00000321331 HIST1H2BHQ93079 126 aa12.32□□□□□ -0.44
HIGD1A-201ENST00000321331 HIST1H2BNQ99877 126 aa12.32□□□□□ -0.44
HIGD1A-201ENST00000321331 HIST1H2BMQ99879 126 aa12.32□□□□□ -0.44
HIGD1A-201ENST00000321331 HSPB8Q9UJY1 196 aa12.32□□□□□ -0.44
HIGD1A-201ENST00000321331 NUPR1O60356 82 aa12.31□□□□□ -0.44
HIGD1A-201ENST00000321331 OXTP01178 125 aa12.31□□□□□ -0.44
HIGD1A-201ENST00000321331 XAGE1AQ9HD64 81 aa12.31□□□□□ -0.44
HIGD1A-201ENST00000321331 H0Y8G0 127 aa12.3□□□□□ -0.44
HIGD1A-201ENST00000321331 M0QXV9 152 aa12.3□□□□□ -0.44
HIGD1A-201ENST00000321331 SFTA2Q6UW10 78 aa12.3□□□□□ -0.44
HIGD1A-201ENST00000321331 TMEM223A0PJW6 202 aa12.29□□□□□ -0.44
HIGD1A-201ENST00000321331 FABP4P15090 132 aa12.29□□□□□ -0.44
HIGD1A-201ENST00000321331 PSORS1C2Q9UIG4 136 aa12.29□□□□□ -0.44
HIGD1A-201ENST00000321331 ODF1Q14990 250 aa12.28□□□□□ -0.44
HIGD1A-201ENST00000321331 KRTAP7-1Q8IUC3 87 aa12.28□□□□□ -0.44
HIGD1A-201ENST00000321331 LRP1Q07954 4544 aaKnown RBP12.27□□□□□ -0.45
HIGD1A-201ENST00000321331 UBE2BP63146 152 aa12.27□□□□□ -0.45
HIGD1A-201ENST00000321331 FAT3Q8TDW7 4589 aa12.26□□□□□ -0.45
HIGD1A-201ENST00000321331 C1orf137Q5JT78 98 aa12.26□□□□□ -0.45
HIGD1A-201ENST00000321331 SERTAD4-AS1Q5TG53 156 aa12.26□□□□□ -0.45
HIGD1A-201ENST00000321331 PFN2P35080 140 aa12.25□□□□□ -0.45
HIGD1A-201ENST00000321331 SPINK6Q6UWN8 80 aa12.25□□□□□ -0.45
HIGD1A-201ENST00000321331 ERG28Q9UKR5 140 aa12.25□□□□□ -0.45
HIGD1A-201ENST00000321331 COX17Q14061 63 aa12.24□□□□□ -0.45
HIGD1A-201ENST00000321331 LBHQ53QV2 105 aaPredicted RBP12.24□□□□□ -0.45
HIGD1A-201ENST00000321331 C22orf24Q9Y442 160 aa12.24□□□□□ -0.45
HIGD1A-201ENST00000321331 PLNP26678 52 aa12.23□□□□□ -0.45
HIGD1A-201ENST00000321331 ZNF625Q96I27 306 aaPredicted RBP12.23□□□□□ -0.45
HIGD1A-201ENST00000321331 MAP1LC3CQ9BXW4 147 aa12.23□□□□□ -0.45
HIGD1A-201ENST00000321331 COA6Q5JTJ3 125 aaKnown RBP12.22□□□□□ -0.45
HIGD1A-201ENST00000321331 SRSF9Q13242 221 aaKnown RBP eCLIP12.21□□□□□ -0.45
HIGD1A-201ENST00000321331 TP73-AS1Q9UF72 201 aa12.21□□□□□ -0.45
HIGD1A-201ENST00000321331 PLA2G2DQ9UNK4 145 aa12.21□□□□□ -0.45
HIGD1A-201ENST00000321331 HERC1Q15751 4861 aa12.2□□□□□ -0.46
HIGD1A-201ENST00000321331 DPM2O94777 84 aa12.2□□□□□ -0.46
HIGD1A-201ENST00000321331 KRTAP11-1Q8IUC1 163 aa12.2□□□□□ -0.46
HIGD1A-201ENST00000321331 MRPL55Q7Z7F7 128 aaKnown RBP12.19□□□□□ -0.46
HIGD1A-201ENST00000321331 REG3GQ6UW15 175 aa12.18□□□□□ -0.46
HIGD1A-201ENST00000321331 IGKCP01834 107 aa12.18□□□□□ -0.46
HIGD1A-201ENST00000321331 IGLV7-43P04211 117 aa12.18□□□□□ -0.46
HIGD1A-201ENST00000321331 PMCHL2Q9BQD1 86 aa12.18□□□□□ -0.46
HIGD1A-201ENST00000321331 HERVK_113P61574 105 aa12.17□□□□□ -0.46
HIGD1A-201ENST00000321331 NKAPP1Q8N9T2 125 aa12.17□□□□□ -0.46
HIGD1A-201ENST00000321331 SND1-IT1Q9HBX3 110 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms