RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 COX19Q49B96 90 aa10.87□□□□□ -0.67
TPM1-203ENST00000317516 M0QXV9 152 aa10.86□□□□□ -0.67
TPM1-203ENST00000317516 UBE2BP63146 152 aa10.86□□□□□ -0.67
TPM1-203ENST00000317516 CDKN2A-AS1Q9UH64 79 aa10.86□□□□□ -0.67
TPM1-203ENST00000317516 CXCL5P42830 114 aa10.83□□□□□ -0.68
TPM1-203ENST00000317516 C9orf129Q5T035 196 aaKnown RBP10.83□□□□□ -0.68
TPM1-203ENST00000317516 F8VRH5 84 aa10.82□□□□□ -0.68
TPM1-203ENST00000317516 KRTAP7-1Q8IUC3 87 aa10.82□□□□□ -0.68
TPM1-203ENST00000317516 LINC00469Q8N7U9 141 aa10.82□□□□□ -0.68
TPM1-203ENST00000317516 TINCRA0A1B0GVN0 87 aa10.81□□□□□ -0.68
TPM1-203ENST00000317516 LINC01546A6NGU7 62 aa10.81□□□□□ -0.68
TPM1-203ENST00000317516 FABP9Q0Z7S8 132 aa10.81□□□□□ -0.68
TPM1-203ENST00000317516 FA2HQ7L5A8 372 aa10.81□□□□□ -0.68
TPM1-203ENST00000317516 COMMD7Q86VX2 200 aa10.81□□□□□ -0.68
TPM1-203ENST00000317516 KRTAP11-1Q8IUC1 163 aa10.81□□□□□ -0.68
TPM1-203ENST00000317516 SMCO4Q9NRQ5 59 aa10.81□□□□□ -0.68
TPM1-203ENST00000317516 H0Y9J4 135 aa10.8□□□□□ -0.68
TPM1-203ENST00000317516 LBHQ53QV2 105 aaPredicted RBP10.8□□□□□ -0.68
TPM1-203ENST00000317516 PDZD11Q5EBL8 140 aa10.8□□□□□ -0.68
TPM1-203ENST00000317516 ODF1Q14990 250 aa10.79□□□□□ -0.68
TPM1-203ENST00000317516 RHEBQ15382 184 aa10.79□□□□□ -0.68
TPM1-203ENST00000317516 MRPL18Q9H0U6 180 aaKnown RBP10.79□□□□□ -0.68
TPM1-203ENST00000317516 CST9LQ9H4G1 147 aa10.79□□□□□ -0.68
TPM1-203ENST00000317516 RPS10P5Q9NQ39 176 aa10.79□□□□□ -0.68
TPM1-203ENST00000317516 TNXBP22105 4242 aa10.78□□□□□ -0.68
TPM1-203ENST00000317516 SMIM1B2RUZ4 78 aa10.77□□□□□ -0.69
TPM1-203ENST00000317516 PMVKQ15126 192 aa10.77□□□□□ -0.69
TPM1-203ENST00000317516 C10orf91Q5T1B1 145 aa10.77□□□□□ -0.69
TPM1-203ENST00000317516 COX7B2Q8TF08 81 aa10.77□□□□□ -0.69
TPM1-203ENST00000317516 XAGE1AQ9HD64 81 aa10.77□□□□□ -0.69
TPM1-203ENST00000317516 C22orf24Q9Y442 160 aa10.77□□□□□ -0.69
TPM1-203ENST00000317516 IGLV5-45A0A087WSX0 123 aa10.76□□□□□ -0.69
TPM1-203ENST00000317516 CARHSP1Q9Y2V2 147 aaKnown RBP10.76□□□□□ -0.69
TPM1-203ENST00000317516 PRR26Q8N8Z3 221 aa10.75□□□□□ -0.69
TPM1-203ENST00000317516 UBR4Q5T4S7 5183 aa10.75□□□□□ -0.69
TPM1-203ENST00000317516 IGLV1-50A0A075B6I6 118 aa10.74□□□□□ -0.69
TPM1-203ENST00000317516 H3BRM9 83 aa10.74□□□□□ -0.69
TPM1-203ENST00000317516 NUPR1O60356 82 aa10.74□□□□□ -0.69
TPM1-203ENST00000317516 TP73-AS1Q9UF72 201 aa10.74□□□□□ -0.69
TPM1-203ENST00000317516 ZNF861PO60384 105 aa10.72□□□□□ -0.69
TPM1-203ENST00000317516 MRPL55Q7Z7F7 128 aaKnown RBP10.72□□□□□ -0.69
TPM1-203ENST00000317516 TRAPPC1Q9Y5R8 145 aa10.72□□□□□ -0.69
TPM1-203ENST00000317516 SPINK8P0C7L1 97 aa10.71□□□□□ -0.69
TPM1-203ENST00000317516 LINC00614P0C842 121 aa10.71□□□□□ -0.69
TPM1-203ENST00000317516 ATP5LO75964 103 aa10.7□□□□□ -0.7
TPM1-203ENST00000317516 RPL13AP40429 203 aaKnown RBP10.7□□□□□ -0.7
TPM1-203ENST00000317516 NDUFA6P56556 154 aa10.7□□□□□ -0.7
TPM1-203ENST00000317516 RAB5BP61020 215 aa10.69□□□□□ -0.7
TPM1-203ENST00000317516 KRTAP1-4P0C5Y4 121 aa10.68□□□□□ -0.7
TPM1-203ENST00000317516 IGLC3P0DOY3 106 aa10.68□□□□□ -0.7
TPM1-203ENST00000317516 HBDP02042 147 aa10.67□□□□□ -0.7
TPM1-203ENST00000317516 RPL28P46779 137 aaKnown RBP10.67□□□□□ -0.7
TPM1-203ENST00000317516 NDUFA5Q16718 116 aa10.67□□□□□ -0.7
TPM1-203ENST00000317516 C18orf32Q8TCD1 76 aa10.67□□□□□ -0.7
TPM1-203ENST00000317516 APOC3P02656 99 aa10.66□□□□□ -0.7
TPM1-203ENST00000317516 BCE1O60756 84 aa10.65□□□□□ -0.7
TPM1-203ENST00000317516 SNAPINO95295 136 aa10.65□□□□□ -0.7
TPM1-203ENST00000317516 SVBPQ8N300 66 aa10.65□□□□□ -0.7
TPM1-203ENST00000317516 NKAPP1Q8N9T2 125 aa10.65□□□□□ -0.7
TPM1-203ENST00000317516 LINC00167Q96N53 147 aa10.65□□□□□ -0.7
TPM1-203ENST00000317516 A0A096LNJ9 63 aa10.64□□□□□ -0.71
TPM1-203ENST00000317516 IGLV5-37A0A075B6J1 123 aa10.63□□□□□ -0.71
TPM1-203ENST00000317516 IGLV5-39A0A0G2JS06 123 aa10.63□□□□□ -0.71
TPM1-203ENST00000317516 RPL37AP8A6NKH3 93 aa10.63□□□□□ -0.71
TPM1-203ENST00000317516 ZNF22P17026 224 aaPredicted RBP10.63□□□□□ -0.71
TPM1-203ENST00000317516 URB1-AS1Q96HZ7 61 aa10.63□□□□□ -0.71
TPM1-203ENST00000317516 GAGE10A6NGK3 116 aa10.62□□□□□ -0.71
TPM1-203ENST00000317516 PFN2P35080 140 aa10.62□□□□□ -0.71
TPM1-203ENST00000317516 LRP2P98164 4655 aa10.62□□□□□ -0.71
TPM1-203ENST00000317516 BAGE3Q86Y29 109 aa10.62□□□□□ -0.71
TPM1-203ENST00000317516 COX17Q14061 63 aa10.61□□□□□ -0.71
TPM1-203ENST00000317516 PMCHL1Q16048 86 aa10.61□□□□□ -0.71
TPM1-203ENST00000317516 SFTA2Q6UW10 78 aa10.61□□□□□ -0.71
TPM1-203ENST00000317516 TMEM170BQ5T4T1 132 aa10.6□□□□□ -0.71
TPM1-203ENST00000317516 ERG28Q9UKR5 140 aa10.59□□□□□ -0.71
TPM1-203ENST00000317516 UBE2AP49459 152 aa10.58□□□□□ -0.72
TPM1-203ENST00000317516 RPL24P83731 157 aaKnown RBP10.58□□□□□ -0.72
TPM1-203ENST00000317516 C11orf86A6NJI1 115 aa10.56□□□□□ -0.72
TPM1-203ENST00000317516 CRYGAP11844 174 aa10.56□□□□□ -0.72
TPM1-203ENST00000317516 CHCHD1Q96BP2 118 aaKnown RBP10.56□□□□□ -0.72
TPM1-203ENST00000317516 SND1-IT1Q9HBX3 110 aa10.56□□□□□ -0.72
TPM1-203ENST00000317516 CHTOPQ9Y3Y2 248 aaKnown RBP10.56□□□□□ -0.72
TPM1-203ENST00000317516 ZNF625Q96I27 306 aaPredicted RBP10.55□□□□□ -0.72
TPM1-203ENST00000317516 IGKV2-28A0A075B6P5 120 aa10.54□□□□□ -0.72
TPM1-203ENST00000317516 IGKV2D-28P01615 120 aa10.54□□□□□ -0.72
TPM1-203ENST00000317516 VPREB1P12018 145 aa10.53□□□□□ -0.72
TPM1-203ENST00000317516 TYMSOSQ8TAI1 123 aa10.53□□□□□ -0.72
TPM1-203ENST00000317516 IFI27L1Q96BM0 104 aa10.53□□□□□ -0.72
TPM1-203ENST00000317516 TRAV12-1A0A0B4J245 112 aa10.52□□□□□ -0.73
TPM1-203ENST00000317516 PRR4Q16378 134 aa10.52□□□□□ -0.73
TPM1-203ENST00000317516 SCO1O75880 301 aa10.51□□□□□ -0.73
TPM1-203ENST00000317516 LINC00158P58513 81 aa10.51□□□□□ -0.73
TPM1-203ENST00000317516 KRTAP13-1Q8IUC0 172 aa10.51□□□□□ -0.73
TPM1-203ENST00000317516 A0A087X002 238 aa10.5□□□□□ -0.73
TPM1-203ENST00000317516 YPEL4Q96NS1 127 aa10.5□□□□□ -0.73
TPM1-203ENST00000317516 TMEM223A0PJW6 202 aa10.49□□□□□ -0.73
TPM1-203ENST00000317516 ATP6V1G1O75348 118 aa10.49□□□□□ -0.73
TPM1-203ENST00000317516 HSBP1O75506 76 aa10.48□□□□□ -0.73
TPM1-203ENST00000317516 TSPAN13O95857 204 aa10.48□□□□□ -0.73
TPM1-203ENST00000317516 FAM19A1Q7Z5A9 133 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms