RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 HIVEP1P15822 2718 aa13.72□□□□□ -0.21
ZNF554-201ENST00000317243 COPS9Q8WXC6 57 aa13.71□□□□□ -0.21
ZNF554-201ENST00000317243 LINC00846Q9NV44 126 aa13.7□□□□□ -0.22
ZNF554-201ENST00000317243 OXTP01178 125 aa13.7□□□□□ -0.22
ZNF554-201ENST00000317243 RNASE1P07998 156 aaKnown RBP13.7□□□□□ -0.22
ZNF554-201ENST00000317243 A0A087WYN8 130 aa13.7□□□□□ -0.22
ZNF554-201ENST00000317243 LOC100131303A0A0U1RQF7 123 aa13.7□□□□□ -0.22
ZNF554-201ENST00000317243 NTM-AS1Q6ZSK4 140 aa13.69□□□□□ -0.22
ZNF554-201ENST00000317243 IGKV3OR2-268A0A0C4DH90 116 aa13.68□□□□□ -0.22
ZNF554-201ENST00000317243 SERP2Q8N6R1 65 aa13.68□□□□□ -0.22
ZNF554-201ENST00000317243 RPL36AP83881 106 aaKnown RBP13.68□□□□□ -0.22
ZNF554-201ENST00000317243 RPL36ALQ969Q0 106 aaKnown RBP13.68□□□□□ -0.22
ZNF554-201ENST00000317243 LINC00337Q8N6G1 96 aa13.67□□□□□ -0.22
ZNF554-201ENST00000317243 C19orf73Q9NVV2 129 aa13.67□□□□□ -0.22
ZNF554-201ENST00000317243 LINC01561Q8N1V8 128 aa13.67□□□□□ -0.22
ZNF554-201ENST00000317243 UPK3BQ9BT76 320 aa13.67□□□□□ -0.22
ZNF554-201ENST00000317243 RPL28P46779 137 aaKnown RBP13.66□□□□□ -0.22
ZNF554-201ENST00000317243 TMEM258P61165 79 aa13.66□□□□□ -0.22
ZNF554-201ENST00000317243 IL17DQ8TAD2 202 aa13.66□□□□□ -0.22
ZNF554-201ENST00000317243 CRPP02741 224 aa13.66□□□□□ -0.22
ZNF554-201ENST00000317243 TOMM7Q9P0U1 55 aa13.66□□□□□ -0.22
ZNF554-201ENST00000317243 TRAV25A0A0B4J276 109 aa13.65□□□□□ -0.22
ZNF554-201ENST00000317243 C4orf26Q17RF5 130 aa13.65□□□□□ -0.22
ZNF554-201ENST00000317243 PLAC8L1A1L4L8 177 aa13.65□□□□□ -0.22
ZNF554-201ENST00000317243 CDC42SE2Q9NRR3 84 aa13.65□□□□□ -0.22
ZNF554-201ENST00000317243 USP17L23D6RBM5 183 aa13.64□□□□□ -0.23
ZNF554-201ENST00000317243 TRAV13-2A0A0B4J235 113 aa13.64□□□□□ -0.23
ZNF554-201ENST00000317243 K7EQD1 137 aa13.64□□□□□ -0.23
ZNF554-201ENST00000317243 IGLV1-51P01701 117 aa13.64□□□□□ -0.23
ZNF554-201ENST00000317243 F5H768 121 aa13.63□□□□□ -0.23
ZNF554-201ENST00000317243 NCR3O14931 201 aa13.63□□□□□ -0.23
ZNF554-201ENST00000317243 Q6JHZ5 121 aa13.63□□□□□ -0.23
ZNF554-201ENST00000317243 IGKV2-28A0A075B6P5 120 aa13.63□□□□□ -0.23
ZNF554-201ENST00000317243 IGKV2D-28P01615 120 aa13.63□□□□□ -0.23
ZNF554-201ENST00000317243 SMIM11BQ8TCY0 68 aa13.63□□□□□ -0.23
ZNF554-201ENST00000317243 UBE2L6O14933 153 aa13.63□□□□□ -0.23
ZNF554-201ENST00000317243 HILS1P60008 231 aa13.63□□□□□ -0.23
ZNF554-201ENST00000317243 C16orf95Q9H693 158 aa13.63□□□□□ -0.23
ZNF554-201ENST00000317243 MIR7-3HGQ8N6C7 128 aa13.62□□□□□ -0.23
ZNF554-201ENST00000317243 SLPIP03973 132 aa13.61□□□□□ -0.23
ZNF554-201ENST00000317243 SND1-IT1Q9HBX3 110 aa13.61□□□□□ -0.23
ZNF554-201ENST00000317243 HRCT1Q6UXD1 115 aa13.6□□□□□ -0.23
ZNF554-201ENST00000317243 TEP1Q99973 2627 aaKnown RBP13.6□□□□□ -0.23
ZNF554-201ENST00000317243 LECT2O14960 151 aa13.6□□□□□ -0.23
ZNF554-201ENST00000317243 TRGV2A0A075B6R0 118 aa13.59□□□□□ -0.23
ZNF554-201ENST00000317243 LY6G6DO95868 133 aa13.59□□□□□ -0.23
ZNF554-201ENST00000317243 PF4P02776 101 aa13.59□□□□□ -0.23
ZNF554-201ENST00000317243 CSNK1G2-AS1Q8NCQ2 148 aa13.59□□□□□ -0.23
ZNF554-201ENST00000317243 WIPF1O43516 503 aa13.58□□□□□ -0.24
ZNF554-201ENST00000317243 FAM19A3Q7Z5A8 133 aa13.57□□□□□ -0.24
ZNF554-201ENST00000317243 LINC00158P58513 81 aa13.57□□□□□ -0.24
ZNF554-201ENST00000317243 WFDC9Q8NEX5 89 aa13.57□□□□□ -0.24
ZNF554-201ENST00000317243 TMEM243Q9BU79 118 aa13.57□□□□□ -0.24
ZNF554-201ENST00000317243 TRBV10-1A0A0K0K1A3 114 aa13.56□□□□□ -0.24
ZNF554-201ENST00000317243 FHL2Q14192 279 aa13.56□□□□□ -0.24
ZNF554-201ENST00000317243 OBSCN-AS1Q96MR7 158 aa13.56□□□□□ -0.24
ZNF554-201ENST00000317243 Q5XG85 94 aa13.56□□□□□ -0.24
ZNF554-201ENST00000317243 INAFM1C9JVW0 142 aa13.55□□□□□ -0.24
ZNF554-201ENST00000317243 COX7B2Q8TF08 81 aa13.55□□□□□ -0.24
ZNF554-201ENST00000317243 OVOL2Q9BRP0 275 aa13.55□□□□□ -0.24
ZNF554-201ENST00000317243 LINC00482Q8N8I6 264 aa13.55□□□□□ -0.24
ZNF554-201ENST00000317243 PFN2P35080 140 aa13.54□□□□□ -0.24
ZNF554-201ENST00000317243 DEFB130BP0DP73 79 aa13.54□□□□□ -0.24
ZNF554-201ENST00000317243 DEFB130AP0DP74 79 aa13.54□□□□□ -0.24
ZNF554-201ENST00000317243 FLNBO75369 2602 aaKnown RBP13.53□□□□□ -0.24
ZNF554-201ENST00000317243 C11orf68Q9H3H3 251 aaKnown RBP13.52□□□□□ -0.24
ZNF554-201ENST00000317243 H0YGX0 51 aa13.52□□□□□ -0.25
ZNF554-201ENST00000317243 CCL18P55774 89 aa13.52□□□□□ -0.25
ZNF554-201ENST00000317243 TRAV23DV6A0A075B6W5 121 aa13.51□□□□□ -0.25
ZNF554-201ENST00000317243 DEFB4AO15263 64 aa13.51□□□□□ -0.25
ZNF554-201ENST00000317243 IGLV4-60A0A075B6I1 120 aa13.5□□□□□ -0.25
ZNF554-201ENST00000317243 TRGV4A0A0C4DH28 118 aa13.5□□□□□ -0.25
ZNF554-201ENST00000317243 GHRHP01286 108 aa13.5□□□□□ -0.25
ZNF554-201ENST00000317243 C16orf74Q96GX8 76 aa13.5□□□□□ -0.25
ZNF554-201ENST00000317243 PKD1L1Q8TDX9 2849 aa13.49□□□□□ -0.25
ZNF554-201ENST00000317243 SS18Q15532 418 aa13.49□□□□□ -0.25
ZNF554-201ENST00000317243 FAM19A1Q7Z5A9 133 aa13.48□□□□□ -0.25
ZNF554-201ENST00000317243 A0A096LPF7 62 aa13.48□□□□□ -0.25
ZNF554-201ENST00000317243 PAX4O43316 350 aa13.48□□□□□ -0.25
ZNF554-201ENST00000317243 CCKP06307 115 aa13.46□□□□□ -0.25
ZNF554-201ENST00000317243 ANK2Q01484 3957 aa13.46□□□□□ -0.25
ZNF554-201ENST00000317243 C20orf197Q8N268 126 aa13.46□□□□□ -0.26
ZNF554-201ENST00000317243 ORMDL1Q9P0S3 153 aa13.46□□□□□ -0.26
ZNF554-201ENST00000317243 ENHOQ6UWT2 76 aa13.45□□□□□ -0.26
ZNF554-201ENST00000317243 IGHV3OR16-9A0A0B4J2B5 98 aa13.43□□□□□ -0.26
ZNF554-201ENST00000317243 TRBV6-8A0A0A6YYG3 113 aa13.41□□□□□ -0.26
ZNF554-201ENST00000317243 C6orf226Q5I0X4 101 aa13.41□□□□□ -0.26
ZNF554-201ENST00000317243 F8P00451 2351 aa13.4□□□□□ -0.26
ZNF554-201ENST00000317243 TRBV6-4A0A1B0GX49 114 aa13.4□□□□□ -0.27
ZNF554-201ENST00000317243 NDUFC2O95298 119 aa13.4□□□□□ -0.27
ZNF554-201ENST00000317243 DEFB135Q30KP9 77 aa13.4□□□□□ -0.27
ZNF554-201ENST00000317243 X6R8D5 127 aa13.4□□□□□ -0.27
ZNF554-201ENST00000317243 CLPSL2Q6UWE3 100 aa13.39□□□□□ -0.27
ZNF554-201ENST00000317243 STAB1Q9NY15 2570 aa13.39□□□□□ -0.27
ZNF554-201ENST00000317243 IBA57-AS1B1ANH7 110 aa13.39□□□□□ -0.27
ZNF554-201ENST00000317243 XCL1P47992 114 aa13.39□□□□□ -0.27
ZNF554-201ENST00000317243 CMC4P56277 68 aaPredicted RBP13.39□□□□□ -0.27
ZNF554-201ENST00000317243 FBN1P35555 2871 aaKnown RBP13.38□□□□□ -0.27
ZNF554-201ENST00000317243 Q8N3U1 123 aa13.38□□□□□ -0.27
ZNF554-201ENST00000317243 A0A087WZ39 114 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms