RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 OBSCN-AS1Q96MR7 158 aa10.28□□□□□ -0.76
COL6A2-202ENST00000310645 UPK3BQ9BT76 320 aa10.28□□□□□ -0.76
COL6A2-202ENST00000310645 ENHOQ6UWT2 76 aa10.28□□□□□ -0.76
COL6A2-202ENST00000310645 TRBV6-4A0A1B0GX49 114 aa10.27□□□□□ -0.76
COL6A2-202ENST00000310645 OXTP01178 125 aa10.27□□□□□ -0.77
COL6A2-202ENST00000310645 RPS28P62857 69 aaKnown RBP10.27□□□□□ -0.77
COL6A2-202ENST00000310645 NOTCH2Q04721 2471 aa10.27□□□□□ -0.77
COL6A2-202ENST00000310645 CCKP06307 115 aa10.27□□□□□ -0.77
COL6A2-202ENST00000310645 SS18Q15532 418 aa10.27□□□□□ -0.77
COL6A2-202ENST00000310645 IL17DQ8TAD2 202 aa10.27□□□□□ -0.77
COL6A2-202ENST00000310645 C4orf3Q8WVX3 66 aa10.27□□□□□ -0.77
COL6A2-202ENST00000310645 ZNF462Q96JM2 2506 aa10.26□□□□□ -0.77
COL6A2-202ENST00000310645 SETXQ7Z333 2677 aaKnown RBP10.26□□□□□ -0.77
COL6A2-202ENST00000310645 FHL2Q14192 279 aa10.26□□□□□ -0.77
COL6A2-202ENST00000310645 C4orf26Q17RF5 130 aa10.26□□□□□ -0.77
COL6A2-202ENST00000310645 TMEM86BQ8N661 226 aa10.25□□□□□ -0.77
COL6A2-202ENST00000310645 A0A087WZ39 114 aa10.25□□□□□ -0.77
COL6A2-202ENST00000310645 TRBV6-8A0A0A6YYG3 113 aa10.25□□□□□ -0.77
COL6A2-202ENST00000310645 C20orf197Q8N268 126 aa10.24□□□□□ -0.77
COL6A2-202ENST00000310645 A0A096LPF7 62 aa10.23□□□□□ -0.77
COL6A2-202ENST00000310645 MTORP42345 2549 aa10.23□□□□□ -0.77
COL6A2-202ENST00000310645 LINC00959A0A1B0GUT2 108 aa10.23□□□□□ -0.77
COL6A2-202ENST00000310645 DEFB130BP0DP73 79 aa10.23□□□□□ -0.77
COL6A2-202ENST00000310645 DEFB130AP0DP74 79 aa10.23□□□□□ -0.77
COL6A2-202ENST00000310645 HRCT1Q6UXD1 115 aa10.23□□□□□ -0.77
COL6A2-202ENST00000310645 NBEAL2Q6ZNJ1 2754 aa10.23□□□□□ -0.77
COL6A2-202ENST00000310645 J3QLI3 93 aa10.22□□□□□ -0.77
COL6A2-202ENST00000310645 Q8N814 137 aa10.21□□□□□ -0.77
COL6A2-202ENST00000310645 DSCR9P59020 149 aa10.21□□□□□ -0.77
COL6A2-202ENST00000310645 S100A7L2Q5SY68 101 aa10.2□□□□□ -0.78
COL6A2-202ENST00000310645 JMJD7-PLA2G4BH0Y9G9 81 aa10.2□□□□□ -0.78
COL6A2-202ENST00000310645 UBL5Q9BZL1 73 aa10.2□□□□□ -0.78
COL6A2-202ENST00000310645 CR1P17927 2039 aa10.2□□□□□ -0.78
COL6A2-202ENST00000310645 C9orf116Q5BN46 136 aaPredicted RBP10.2□□□□□ -0.78
COL6A2-202ENST00000310645 PLAC8L1A1L4L8 177 aa10.19□□□□□ -0.78
COL6A2-202ENST00000310645 GIG44P09565 113 aaPredicted RBP10.19□□□□□ -0.78
COL6A2-202ENST00000310645 C16orf74Q96GX8 76 aa10.19□□□□□ -0.78
COL6A2-202ENST00000310645 IGSF10Q6WRI0 2623 aa10.19□□□□□ -0.78
COL6A2-202ENST00000310645 A0A096LNT2 108 aa10.19□□□□□ -0.78
COL6A2-202ENST00000310645 TMEM256-PLSCR3K7ERE1 68 aa10.19□□□□□ -0.78
COL6A2-202ENST00000310645 IGLV10-54A0A075B6I4 117 aa10.18□□□□□ -0.78
COL6A2-202ENST00000310645 CCL24O00175 119 aa10.18□□□□□ -0.78
COL6A2-202ENST00000310645 C6orf99Q4VX62 202 aa10.18□□□□□ -0.78
COL6A2-202ENST00000310645 LY6G6DO95868 133 aa10.18□□□□□ -0.78
COL6A2-202ENST00000310645 NANOS2P60321 138 aaKnown RBP10.18□□□□□ -0.78
COL6A2-202ENST00000310645 GCN1Q92616 2671 aaKnown RBP10.18□□□□□ -0.78
COL6A2-202ENST00000310645 IGHV4-31P0DP07 118 aa10.17□□□□□ -0.78
COL6A2-202ENST00000310645 HAMPP81172 84 aa10.17□□□□□ -0.78
COL6A2-202ENST00000310645 LAMTOR3Q9UHA4 124 aa10.17□□□□□ -0.78
COL6A2-202ENST00000310645 AKAP9Q99996 3911 aa10.17□□□□□ -0.78
COL6A2-202ENST00000310645 ACANP16112 2415 aa10.15□□□□□ -0.78
COL6A2-202ENST00000310645 GYPEP15421 78 aa10.15□□□□□ -0.78
COL6A2-202ENST00000310645 TRAV25A0A0B4J276 109 aa10.15□□□□□ -0.78
COL6A2-202ENST00000310645 APCP25054 2843 aa10.14□□□□□ -0.79
COL6A2-202ENST00000310645 LINC00269Q8N2A0 174 aa10.14□□□□□ -0.79
COL6A2-202ENST00000310645 M0R2N4 97 aa10.13□□□□□ -0.79
COL6A2-202ENST00000310645 FSHBP01225 129 aa10.13□□□□□ -0.79
COL6A2-202ENST00000310645 Q5XG85 94 aa10.13□□□□□ -0.79
COL6A2-202ENST00000310645 ATP5EP2Q5VTU8 51 aa10.13□□□□□ -0.79
COL6A2-202ENST00000310645 Q8IZM0 81 aa10.13□□□□□ -0.79
COL6A2-202ENST00000310645 NBPF19A0A087WUL8 3843 aa10.12□□□□□ -0.79
COL6A2-202ENST00000310645 RBM3P98179 157 aaKnown RBP10.12□□□□□ -0.79
COL6A2-202ENST00000310645 SNURFQ9Y675 71 aa10.12□□□□□ -0.79
COL6A2-202ENST00000310645 NDUFC2O95298 119 aa10.12□□□□□ -0.79
COL6A2-202ENST00000310645 HIVEP2P31629 2446 aa10.11□□□□□ -0.79
COL6A2-202ENST00000310645 Q8N3U1 123 aa10.11□□□□□ -0.79
COL6A2-202ENST00000310645 FAM236DA0A1B0GTK5 79 aa10.11□□□□□ -0.79
COL6A2-202ENST00000310645 FAM236CP0DP71 79 aa10.11□□□□□ -0.79
COL6A2-202ENST00000310645 Q8NDZ9 215 aa10.11□□□□□ -0.79
COL6A2-202ENST00000310645 LINC00167Q96N53 147 aa10.11□□□□□ -0.79
COL6A2-202ENST00000310645 ESM1Q9NQ30 184 aa10.1□□□□□ -0.79
COL6A2-202ENST00000310645 PRB1P04280 392 aa10.09□□□□□ -0.79
COL6A2-202ENST00000310645 KRTAP10-9P60411 292 aa10.09□□□□□ -0.79
COL6A2-202ENST00000310645 SCXQ7RTU7 201 aa10.09□□□□□ -0.79
COL6A2-202ENST00000310645 TRAV10A0A0B4J240 114 aa10.08□□□□□ -0.8
COL6A2-202ENST00000310645 SPATA3Q8NHX4 192 aa10.08□□□□□ -0.8
COL6A2-202ENST00000310645 ANGP03950 147 aaKnown RBP10.08□□□□□ -0.8
COL6A2-202ENST00000310645 LINC01547P58512 204 aaPredicted RBP10.07□□□□□ -0.8
COL6A2-202ENST00000310645 LINC00575Q6W349 94 aa10.07□□□□□ -0.8
COL6A2-202ENST00000310645 BBC3Q96PG8 261 aaPredicted RBP10.07□□□□□ -0.8
COL6A2-202ENST00000310645 Q6ZQT0 140 aa10.07□□□□□ -0.8
COL6A2-202ENST00000310645 ZNF843Q8N446 348 aa10.07□□□□□ -0.8
COL6A2-202ENST00000310645 CSNK1G2-AS1Q8NCQ2 148 aa10.07□□□□□ -0.8
COL6A2-202ENST00000310645 CHCHD10Q8WYQ3 142 aaPredicted RBP10.07□□□□□ -0.8
COL6A2-202ENST00000310645 RMI2Q96E14 147 aa10.07□□□□□ -0.8
COL6A2-202ENST00000310645 LYPD5Q6UWN5 251 aa10.06□□□□□ -0.8
COL6A2-202ENST00000310645 USP24Q9UPU5 2620 aa10.06□□□□□ -0.8
COL6A2-202ENST00000310645 Q6ZQY7 126 aa10.06□□□□□ -0.8
COL6A2-202ENST00000310645 KIAA0087Q14695 138 aa10.05□□□□□ -0.8
COL6A2-202ENST00000310645 C6orf223Q8N319 242 aa10.05□□□□□ -0.8
COL6A2-202ENST00000310645 Q6ZVQ6 151 aa10.05□□□□□ -0.8
COL6A2-202ENST00000310645 NDUFC2-KCTD14E9PQ53 114 aa10.04□□□□□ -0.8
COL6A2-202ENST00000310645 H7BZZ5 65 aa10.04□□□□□ -0.8
COL6A2-202ENST00000310645 DNAJC9-AS1A6NH13 148 aa10.04□□□□□ -0.8
COL6A2-202ENST00000310645 DEFB4AO15263 64 aa10.04□□□□□ -0.8
COL6A2-202ENST00000310645 UNQ6190/PRO20217Q6UXQ8 127 aa10.04□□□□□ -0.8
COL6A2-202ENST00000310645 WFDC11Q8NEX6 87 aa10.04□□□□□ -0.8
COL6A2-202ENST00000310645 LINC01006Q8NI28 216 aa10.04□□□□□ -0.8
COL6A2-202ENST00000310645 TRBV10-3A0A0K0K1G6 114 aa10.04□□□□□ -0.8
COL6A2-202ENST00000310645 C10orf25Q5T742 122 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms