RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 SVEP1Q4LDE5 3571 aa4.34□□□□□ -1.71
SEC22A-201ENST00000309934 CHD6Q8TD26 2715 aa4.34□□□□□ -1.72
SEC22A-201ENST00000309934 UNC79Q9P2D8 2635 aa4.34□□□□□ -1.72
SEC22A-201ENST00000309934 A0A087WZ39 114 aa4.34□□□□□ -1.72
SEC22A-201ENST00000309934 CCKP06307 115 aa4.34□□□□□ -1.72
SEC22A-201ENST00000309934 GYPEP15421 78 aa4.34□□□□□ -1.72
SEC22A-201ENST00000309934 RNASE13Q5GAN3 156 aaKnown RBP4.34□□□□□ -1.72
SEC22A-201ENST00000309934 Q5XG85 94 aa4.34□□□□□ -1.72
SEC22A-201ENST00000309934 NEXN-AS1Q8NBZ9 246 aa4.34□□□□□ -1.72
SEC22A-201ENST00000309934 H3BNG1 76 aa4.33□□□□□ -1.72
SEC22A-201ENST00000309934 COX7A2LO14548 114 aa4.33□□□□□ -1.72
SEC22A-201ENST00000309934 UPK3BQ9BT76 320 aa4.33□□□□□ -1.72
SEC22A-201ENST00000309934 IGHV3-33P01772 117 aa4.33□□□□□ -1.72
SEC22A-201ENST00000309934 C1orf158Q8N1D5 194 aa4.33□□□□□ -1.72
SEC22A-201ENST00000309934 TLN2Q9Y4G6 2542 aa4.33□□□□□ -1.72
SEC22A-201ENST00000309934 A0A0J9YXY3 114 aa4.33□□□□□ -1.72
SEC22A-201ENST00000309934 ESRGQ1W209 222 aa4.33□□□□□ -1.72
SEC22A-201ENST00000309934 ENHOQ6UWT2 76 aa4.33□□□□□ -1.72
SEC22A-201ENST00000309934 TMEM223A0PJW6 202 aa4.32□□□□□ -1.72
SEC22A-201ENST00000309934 DEFB135Q30KP9 77 aa4.32□□□□□ -1.72
SEC22A-201ENST00000309934 C14orf132Q9NPU4 83 aa4.32□□□□□ -1.72
SEC22A-201ENST00000309934 LINC00474Q9P2X8 69 aa4.32□□□□□ -1.72
SEC22A-201ENST00000309934 KIF25-AS1Q9Y6Z4 181 aa4.32□□□□□ -1.72
SEC22A-201ENST00000309934 NOTCH3Q9UM47 2321 aa4.32□□□□□ -1.72
SEC22A-201ENST00000309934 HUWE1Q7Z6Z7 4374 aaKnown RBP4.32□□□□□ -1.72
SEC22A-201ENST00000309934 TRAV13-2A0A0B4J235 113 aa4.32□□□□□ -1.72
SEC22A-201ENST00000309934 TRAV10A0A0B4J240 114 aa4.32□□□□□ -1.72
SEC22A-201ENST00000309934 DEFB1P60022 68 aa4.32□□□□□ -1.72
SEC22A-201ENST00000309934 Q6ZTI0 123 aa4.32□□□□□ -1.72
SEC22A-201ENST00000309934 KTN1-AS1Q86SY8 53 aa4.32□□□□□ -1.72
SEC22A-201ENST00000309934 TRIAP1O43715 76 aa4.32□□□□□ -1.72
SEC22A-201ENST00000309934 CCL18P55774 89 aa4.32□□□□□ -1.72
SEC22A-201ENST00000309934 FAM19A1Q7Z5A9 133 aa4.32□□□□□ -1.72
SEC22A-201ENST00000309934 C11orf72Q8NBR9 251 aa4.32□□□□□ -1.72
SEC22A-201ENST00000309934 TSHBP01222 138 aa4.31□□□□□ -1.72
SEC22A-201ENST00000309934 UBE2DNLQ8IWF7 75 aa4.31□□□□□ -1.72
SEC22A-201ENST00000309934 DEFB104AQ8WTQ1 72 aa4.31□□□□□ -1.72
SEC22A-201ENST00000309934 USP9YO00507 2555 aaPredicted RBP4.31□□□□□ -1.72
SEC22A-201ENST00000309934 ZNF73O43830 326 aaPredicted RBP4.31□□□□□ -1.72
SEC22A-201ENST00000309934 IGHV4-30-4P0DP06 118 aa4.31□□□□□ -1.72
SEC22A-201ENST00000309934 ZNF706Q9Y5V0 76 aaPredicted RBP4.31□□□□□ -1.72
SEC22A-201ENST00000309934 IGLV2-18A0A075B6J9 118 aa4.31□□□□□ -1.72
SEC22A-201ENST00000309934 TRBV6-8A0A0A6YYG3 113 aa4.31□□□□□ -1.72
SEC22A-201ENST00000309934 IGHV4-28A0A0C4DH34 117 aa4.31□□□□□ -1.72
SEC22A-201ENST00000309934 DAND5Q8N907 189 aa4.31□□□□□ -1.72
SEC22A-201ENST00000309934 URB1-AS1Q96HZ7 61 aa4.31□□□□□ -1.72
SEC22A-201ENST00000309934 DCHS1Q96JQ0 3298 aa4.3□□□□□ -1.72
SEC22A-201ENST00000309934 TRAV7A0A075B6U4 112 aa4.3□□□□□ -1.72
SEC22A-201ENST00000309934 TRBV30A0A0K0K1B3 111 aa4.3□□□□□ -1.72
SEC22A-201ENST00000309934 LELP1Q5T871 98 aa4.3□□□□□ -1.72
SEC22A-201ENST00000309934 H3BQ85 93 aa4.3□□□□□ -1.72
SEC22A-201ENST00000309934 UBE2D1P51668 147 aa4.3□□□□□ -1.72
SEC22A-201ENST00000309934 Q6JHZ5 121 aa4.3□□□□□ -1.72
SEC22A-201ENST00000309934 NDUFA12Q9UI09 145 aa4.3□□□□□ -1.72
SEC22A-201ENST00000309934 GCN1Q92616 2671 aaKnown RBP4.3□□□□□ -1.72
SEC22A-201ENST00000309934 ATP5EP2Q5VTU8 51 aa4.3□□□□□ -1.72
SEC22A-201ENST00000309934 WNK1Q9H4A3 2382 aa4.3□□□□□ -1.72
SEC22A-201ENST00000309934 FHL2Q14192 279 aa4.29□□□□□ -1.72
SEC22A-201ENST00000309934 SBSPONQ8IVN8 264 aa4.29□□□□□ -1.72
SEC22A-201ENST00000309934 CR1P17927 2039 aa4.29□□□□□ -1.72
SEC22A-201ENST00000309934 IGLV4-3A0A075B6K6 122 aa4.29□□□□□ -1.72
SEC22A-201ENST00000309934 IGIPA6NJ69 53 aa4.29□□□□□ -1.72
SEC22A-201ENST00000309934 MP68P56378 58 aa4.29□□□□□ -1.72
SEC22A-201ENST00000309934 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.29□□□□□ -1.72
SEC22A-201ENST00000309934 A0A0J9YY99 117 aa4.29□□□□□ -1.72
SEC22A-201ENST00000309934 A0A1B0GUV1 79 aa4.29□□□□□ -1.72
SEC22A-201ENST00000309934 IGKV2-29A2NJV5 120 aaPredicted RBP4.29□□□□□ -1.72
SEC22A-201ENST00000309934 C14orf177Q52M58 125 aa4.29□□□□□ -1.72
SEC22A-201ENST00000309934 KMT2AQ03164 3969 aa4.28□□□□□ -1.72
SEC22A-201ENST00000309934 IGHV3-38A0A0C4DH36 116 aa4.28□□□□□ -1.72
SEC22A-201ENST00000309934 LINC00315P59091 139 aa4.28□□□□□ -1.72
SEC22A-201ENST00000309934 KRTAP24-1Q3LI83 254 aa4.28□□□□□ -1.72
SEC22A-201ENST00000309934 TOMM7Q9P0U1 55 aa4.28□□□□□ -1.72
SEC22A-201ENST00000309934 UBE2D4Q9Y2X8 147 aa4.28□□□□□ -1.72
SEC22A-201ENST00000309934 ANGP03950 147 aaKnown RBP4.28□□□□□ -1.72
SEC22A-201ENST00000309934 Q9HAA7 133 aa4.28□□□□□ -1.72
SEC22A-201ENST00000309934 DMXL1Q9Y485 3027 aa4.28□□□□□ -1.72
SEC22A-201ENST00000309934 IGKV3OR2-268A0A0C4DH90 116 aa4.28□□□□□ -1.72
SEC22A-201ENST00000309934 LST1O00453 97 aa4.27□□□□□ -1.73
SEC22A-201ENST00000309934 LINC00158P58513 81 aa4.27□□□□□ -1.73
SEC22A-201ENST00000309934 EGFEM1PQ0D2K5 195 aa4.27□□□□□ -1.73
SEC22A-201ENST00000309934 COX7B2Q8TF08 81 aa4.27□□□□□ -1.73
SEC22A-201ENST00000309934 ANKRD17O75179 2603 aaKnown RBP4.27□□□□□ -1.73
SEC22A-201ENST00000309934 MIAQ16674 131 aa4.27□□□□□ -1.73
SEC22A-201ENST00000309934 PRR15Q8IV56 129 aa4.27□□□□□ -1.73
SEC22A-201ENST00000309934 AMELXQ99217 191 aa4.27□□□□□ -1.73
SEC22A-201ENST00000309934 SETD2Q9BYW2 2564 aaPredicted RBP4.27□□□□□ -1.73
SEC22A-201ENST00000309934 CXCL6P80162 114 aa4.27□□□□□ -1.73
SEC22A-201ENST00000309934 LCA10Q71F78 164 aa4.27□□□□□ -1.73
SEC22A-201ENST00000309934 LINC00612Q8N6U2 182 aa4.27□□□□□ -1.73
SEC22A-201ENST00000309934 DEFB131BA0A096LNP1 70 aa4.26□□□□□ -1.73
SEC22A-201ENST00000309934 A0A0J9YXV3 536 aa4.26□□□□□ -1.73
SEC22A-201ENST00000309934 RPL39P62891 51 aaKnown RBP4.26□□□□□ -1.73
SEC22A-201ENST00000309934 LINC00269Q8N2A0 174 aa4.26□□□□□ -1.73
SEC22A-201ENST00000309934 IGHV3-30P01768 117 aa4.26□□□□□ -1.73
SEC22A-201ENST00000309934 IGHV3-30-5P0DP03 117 aa4.26□□□□□ -1.73
SEC22A-201ENST00000309934 PRR4Q16378 134 aa4.26□□□□□ -1.73
SEC22A-201ENST00000309934 C19orf73Q9NVV2 129 aa4.26□□□□□ -1.73
SEC22A-201ENST00000309934 ORMDL1Q9P0S3 153 aa4.26□□□□□ -1.73
SEC22A-201ENST00000309934 NDUFA1O15239 70 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms