RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 LITAFQ99732 161 aa14.99□□□□□ -0.01
IRF3-201ENST00000309877 NBDYA0A0U1RRE5 68 aa14.98□□□□□ -0.01
IRF3-201ENST00000309877 TM2D2Q9BX73 214 aa14.98□□□□□ -0.01
IRF3-201ENST00000309877 ZNF561-AS1K7EIQ3 104 aa14.97□□□□□ -0.01
IRF3-201ENST00000309877 PTTG1IPP53801 180 aa14.97□□□□□ -0.01
IRF3-201ENST00000309877 ADAMTSL4-AS1Q5T5F5 129 aa14.97□□□□□ -0.01
IRF3-201ENST00000309877 A0A0U1RRA0 63 aa14.97□□□□□ -0.01
IRF3-201ENST00000309877 CASC10Q5T4H9 136 aa14.97□□□□□ -0.01
IRF3-201ENST00000309877 LINC00526Q96FQ7 95 aa14.97□□□□□ -0.01
IRF3-201ENST00000309877 HIGD2BQ4VC39 106 aa14.96□□□□□ -0.01
IRF3-201ENST00000309877 C6orf223Q8N319 242 aa14.96□□□□□ -0.01
IRF3-201ENST00000309877 C15orf56Q8N910 161 aa14.96□□□□□ -0.01
IRF3-201ENST00000309877 SPANXDQ9BXN6 97 aa14.96□□□□□ -0.01
IRF3-201ENST00000309877 SPANXCQ9NY87 97 aa14.96□□□□□ -0.01
IRF3-201ENST00000309877 C3orf84H3BNL1 204 aa14.95□□□□□ -0.02
IRF3-201ENST00000309877 SMIM13P0DJ93 91 aa14.95□□□□□ -0.02
IRF3-201ENST00000309877 FXYD2P54710 66 aa14.95□□□□□ -0.02
IRF3-201ENST00000309877 Q6ZVH6 145 aa14.95□□□□□ -0.02
IRF3-201ENST00000309877 TGP01266 2768 aa14.94□□□□□ -0.02
IRF3-201ENST00000309877 NTN5Q8WTR8 489 aaPredicted RBP14.93□□□□□ -0.02
IRF3-201ENST00000309877 LINC00158P58513 81 aa14.93□□□□□ -0.02
IRF3-201ENST00000309877 COL5A1-AS1Q5SY13 56 aa14.93□□□□□ -0.02
IRF3-201ENST00000309877 MUSTN1Q8IVN3 82 aa14.93□□□□□ -0.02
IRF3-201ENST00000309877 DAND5Q8N907 189 aa14.93□□□□□ -0.02
IRF3-201ENST00000309877 ERG28Q9UKR5 140 aa14.93□□□□□ -0.02
IRF3-201ENST00000309877 A6NDN8 102 aa14.92□□□□□ -0.02
IRF3-201ENST00000309877 LBHQ53QV2 105 aaPredicted RBP14.92□□□□□ -0.02
IRF3-201ENST00000309877 PFN2P35080 140 aa14.91□□□□□ -0.02
IRF3-201ENST00000309877 UNQ6190/PRO20217Q6UXQ8 127 aa14.91□□□□□ -0.02
IRF3-201ENST00000309877 TENM2Q9NT68 2774 aa14.91□□□□□ -0.02
IRF3-201ENST00000309877 LYSTQ99698 3801 aa14.91□□□□□ -0.02
IRF3-201ENST00000309877 GVQW2A0A096LPI5 108 aaPredicted RBP14.9□□□□□ -0.02
IRF3-201ENST00000309877 PSCAO43653 123 aa14.9□□□□□ -0.02
IRF3-201ENST00000309877 TMEM238LA0A1B0GVL6 79 aa14.9□□□□□ -0.02
IRF3-201ENST00000309877 A6NJY4 79 aa14.9□□□□□ -0.02
IRF3-201ENST00000309877 USP17L23D6RBM5 183 aa14.9□□□□□ -0.02
IRF3-201ENST00000309877 NPC2P61916 151 aa14.9□□□□□ -0.02
IRF3-201ENST00000309877 CAMK2N2Q96S95 79 aa14.9□□□□□ -0.02
IRF3-201ENST00000309877 IFITM1P13164 125 aa14.89□□□□□ -0.03
IRF3-201ENST00000309877 RPL24P83731 157 aaKnown RBP14.89□□□□□ -0.03
IRF3-201ENST00000309877 C10orf25Q5T742 122 aa14.89□□□□□ -0.03
IRF3-201ENST00000309877 C2orf48Q96LS8 159 aa14.89□□□□□ -0.03
IRF3-201ENST00000309877 M0R2N4 97 aa14.88□□□□□ -0.03
IRF3-201ENST00000309877 LY6G6CO95867 125 aa14.88□□□□□ -0.03
IRF3-201ENST00000309877 COPS9Q8WXC6 57 aa14.88□□□□□ -0.03
IRF3-201ENST00000309877 NHP2Q9NX24 153 aaKnown RBP14.88□□□□□ -0.03
IRF3-201ENST00000309877 MIR7-3HGQ8N6C7 128 aa14.87□□□□□ -0.03
IRF3-201ENST00000309877 DNAH1Q9P2D7 4330 aa14.87□□□□□ -0.03
IRF3-201ENST00000309877 F8WDY8 70 aa14.87□□□□□ -0.03
IRF3-201ENST00000309877 LINC00308Q8TCZ7 52 aa14.87□□□□□ -0.03
IRF3-201ENST00000309877 COX17Q14061 63 aa14.86□□□□□ -0.03
IRF3-201ENST00000309877 C9orf116Q5BN46 136 aaPredicted RBP14.85□□□□□ -0.03
IRF3-201ENST00000309877 A4D1N5 150 aa14.84□□□□□ -0.03
IRF3-201ENST00000309877 LECT2O14960 151 aa14.84□□□□□ -0.03
IRF3-201ENST00000309877 VPS13DQ5THJ4 4388 aa14.84□□□□□ -0.03
IRF3-201ENST00000309877 TRBV30A0A0K0K1B3 111 aa14.83□□□□□ -0.04
IRF3-201ENST00000309877 LINC00476Q8WZB0 136 aa14.83□□□□□ -0.04
IRF3-201ENST00000309877 C6orf48Q9UBA6 75 aa14.83□□□□□ -0.04
IRF3-201ENST00000309877 Q6ZRU5 148 aa14.82□□□□□ -0.04
IRF3-201ENST00000309877 SYCNQ0VAF6 134 aa14.81□□□□□ -0.04
IRF3-201ENST00000309877 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.81□□□□□ -0.04
IRF3-201ENST00000309877 K7ERJ3 54 aa14.81□□□□□ -0.04
IRF3-201ENST00000309877 EIF4EBP3O60516 100 aaPredicted RBP14.81□□□□□ -0.04
IRF3-201ENST00000309877 SOSTDC1Q6X4U4 206 aa14.81□□□□□ -0.04
IRF3-201ENST00000309877 A0A1B0GWB2 263 aa14.79□□□□□ -0.04
IRF3-201ENST00000309877 Q6ZR54 194 aa14.79□□□□□ -0.04
IRF3-201ENST00000309877 RAB37Q96AX2 223 aa14.78□□□□□ -0.04
IRF3-201ENST00000309877 PPDPFQ9H3Y8 114 aa14.78□□□□□ -0.04
IRF3-201ENST00000309877 TAX1BP3O14907 124 aa14.77□□□□□ -0.04
IRF3-201ENST00000309877 CFC1BP0CG36 223 aa14.77□□□□□ -0.04
IRF3-201ENST00000309877 CFC1P0CG37 223 aa14.77□□□□□ -0.04
IRF3-201ENST00000309877 WFDC2Q14508 124 aa14.77□□□□□ -0.05
IRF3-201ENST00000309877 CARD19Q96LW7 228 aa14.77□□□□□ -0.05
IRF3-201ENST00000309877 C14orf177Q52M58 125 aa14.76□□□□□ -0.05
IRF3-201ENST00000309877 Q6ZRN7 208 aaPredicted RBP14.76□□□□□ -0.05
IRF3-201ENST00000309877 A0A0B4J2C4 111 aa14.74□□□□□ -0.05
IRF3-201ENST00000309877 SLPIP03973 132 aa14.74□□□□□ -0.05
IRF3-201ENST00000309877 SND1-IT1Q9HBX3 110 aa14.74□□□□□ -0.05
IRF3-201ENST00000309877 RNF151Q2KHN1 245 aa14.72□□□□□ -0.05
IRF3-201ENST00000309877 PRO1854Q9UHT4 67 aa14.71□□□□□ -0.05
IRF3-201ENST00000309877 LOC107984156A0A0G2JMH3 177 aa14.71□□□□□ -0.06
IRF3-201ENST00000309877 NDUFC2-KCTD14E9PQ53 114 aa14.71□□□□□ -0.06
IRF3-201ENST00000309877 ARL17AQ8IVW1 177 aa14.71□□□□□ -0.06
IRF3-201ENST00000309877 LRCOL1A6NCL2 159 aa14.7□□□□□ -0.06
IRF3-201ENST00000309877 C1orf134Q5TEV5 83 aa14.7□□□□□ -0.06
IRF3-201ENST00000309877 C9orf118A6NHY6 69 aa14.69□□□□□ -0.06
IRF3-201ENST00000309877 A0A1B0GV90 55 aa14.68□□□□□ -0.06
IRF3-201ENST00000309877 PGPEP1Q9NXJ5 209 aa14.68□□□□□ -0.06
IRF3-201ENST00000309877 H3BUT2 72 aa14.67□□□□□ -0.06
IRF3-201ENST00000309877 NAA38Q9BRA0 125 aaKnown RBP14.66□□□□□ -0.06
IRF3-201ENST00000309877 DNAH10Q8IVF4 4471 aa14.66□□□□□ -0.06
IRF3-201ENST00000309877 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.65□□□□□ -0.06
IRF3-201ENST00000309877 CNBPP62633 177 aaKnown RBP14.65□□□□□ -0.06
IRF3-201ENST00000309877 GAGE2EQ4V326 116 aa14.65□□□□□ -0.06
IRF3-201ENST00000309877 XAGE1AQ9HD64 81 aa14.65□□□□□ -0.06
IRF3-201ENST00000309877 GAGE2DQ9UEU5 116 aa14.65□□□□□ -0.06
IRF3-201ENST00000309877 H7C2G1 150 aa14.65□□□□□ -0.06
IRF3-201ENST00000309877 RPL18AQ02543 176 aaKnown RBP14.65□□□□□ -0.06
IRF3-201ENST00000309877 Q6ZRP5 223 aa14.65□□□□□ -0.06
IRF3-201ENST00000309877 TLX1NBP0CAT3 122 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms