RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 IGLV5-39A0A0G2JS06 123 aa15.77■□□□□ 0.11
HOXC9-201ENST00000303450 SDIM1Q6ZPB5 146 aa15.77■□□□□ 0.11
HOXC9-201ENST00000303450 TMEM223A0PJW6 202 aa15.76■□□□□ 0.11
HOXC9-201ENST00000303450 C5orf52A6NGY3 159 aa15.76■□□□□ 0.11
HOXC9-201ENST00000303450 C10orf25Q5T742 122 aa15.76■□□□□ 0.11
HOXC9-201ENST00000303450 CXCL5P42830 114 aa15.75■□□□□ 0.11
HOXC9-201ENST00000303450 LINC01545Q5VT33 79 aa15.75■□□□□ 0.11
HOXC9-201ENST00000303450 BIRC6Q9NR09 4857 aa15.74■□□□□ 0.11
HOXC9-201ENST00000303450 RNF151Q2KHN1 245 aa15.74■□□□□ 0.11
HOXC9-201ENST00000303450 PKIGQ9Y2B9 76 aa15.73■□□□□ 0.11
HOXC9-201ENST00000303450 C6orf48Q9UBA6 75 aa15.73■□□□□ 0.11
HOXC9-201ENST00000303450 TRBV30A0A0K0K1B3 111 aa15.72■□□□□ 0.11
HOXC9-201ENST00000303450 FAM30AQ9NZY2 134 aa15.72■□□□□ 0.11
HOXC9-201ENST00000303450 C20orf202A1L168 122 aa15.71■□□□□ 0.11
HOXC9-201ENST00000303450 LOC107984640A0A0U1RRK4 108 aa15.7■□□□□ 0.1
HOXC9-201ENST00000303450 Q6ZSA8 131 aa15.69■□□□□ 0.1
HOXC9-201ENST00000303450 TMA7Q9Y2S6 64 aaKnown RBP15.69■□□□□ 0.1
HOXC9-201ENST00000303450 HERVK_113P61574 105 aa15.68■□□□□ 0.1
HOXC9-201ENST00000303450 CDK2AP2O75956 126 aa15.67■□□□□ 0.1
HOXC9-201ENST00000303450 IGKV2-24A0A0C4DH68 120 aa15.66■□□□□ 0.1
HOXC9-201ENST00000303450 RPL18AQ02543 176 aaKnown RBP15.66■□□□□ 0.1
HOXC9-201ENST00000303450 C9orf116Q5BN46 136 aaPredicted RBP15.66■□□□□ 0.1
HOXC9-201ENST00000303450 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.66■□□□□ 0.1
HOXC9-201ENST00000303450 A0A096LNI7 61 aa15.65■□□□□ 0.1
HOXC9-201ENST00000303450 CHTF8P0CG12 524 aa15.65■□□□□ 0.1
HOXC9-201ENST00000303450 DNAH8Q96JB1 4490 aa15.65■□□□□ 0.1
HOXC9-201ENST00000303450 GAGE2BQ13066 116 aa15.64■□□□□ 0.09
HOXC9-201ENST00000303450 DPH3Q96FX2 82 aa15.64■□□□□ 0.09
HOXC9-201ENST00000303450 SFTA2Q6UW10 78 aa15.63■□□□□ 0.09
HOXC9-201ENST00000303450 PANO1I0J062 215 aa15.63■□□□□ 0.09
HOXC9-201ENST00000303450 LEPROTO15243 131 aa15.63■□□□□ 0.09
HOXC9-201ENST00000303450 TLX1NBP0CAT3 122 aa15.63■□□□□ 0.09
HOXC9-201ENST00000303450 AKR1D1P51857 326 aa15.63■□□□□ 0.09
HOXC9-201ENST00000303450 XGP55808 180 aa15.63■□□□□ 0.09
HOXC9-201ENST00000303450 HAMPP81172 84 aa15.63■□□□□ 0.09
HOXC9-201ENST00000303450 PLEKHB2Q96CS7 222 aa15.63■□□□□ 0.09
HOXC9-201ENST00000303450 LINC00474Q9P2X8 69 aa15.63■□□□□ 0.09
HOXC9-201ENST00000303450 PTTG1IPP53801 180 aa15.62■□□□□ 0.09
HOXC9-201ENST00000303450 NDUFC2-KCTD14E9PQ53 114 aa15.61■□□□□ 0.09
HOXC9-201ENST00000303450 CIRBPQ14011 172 aaKnown RBP15.61■□□□□ 0.09
HOXC9-201ENST00000303450 MAJINQ3KP22 176 aa15.61■□□□□ 0.09
HOXC9-201ENST00000303450 SPACA4Q8TDM5 124 aa15.61■□□□□ 0.09
HOXC9-201ENST00000303450 Q6ZRP5 223 aa15.6■□□□□ 0.09
HOXC9-201ENST00000303450 APOBP04114 4563 aaKnown RBP15.59■□□□□ 0.09
HOXC9-201ENST00000303450 SCXQ7RTU7 201 aa15.59■□□□□ 0.09
HOXC9-201ENST00000303450 STPG4Q8N801 248 aa15.59■□□□□ 0.09
HOXC9-201ENST00000303450 ZNF625Q96I27 306 aaPredicted RBP15.59■□□□□ 0.09
HOXC9-201ENST00000303450 J3QQQ9 107 aa15.58■□□□□ 0.09
HOXC9-201ENST00000303450 GAGE2EQ4V326 116 aa15.58■□□□□ 0.09
HOXC9-201ENST00000303450 ATOH7Q8N100 152 aa15.58■□□□□ 0.09
HOXC9-201ENST00000303450 GAGE2DQ9UEU5 116 aa15.58■□□□□ 0.09
HOXC9-201ENST00000303450 E9PLD3 99 aa15.58■□□□□ 0.08
HOXC9-201ENST00000303450 TSPEAR-AS2P59090 65 aa15.58■□□□□ 0.08
HOXC9-201ENST00000303450 CIRBP-AS1Q8TBR5 109 aa15.58■□□□□ 0.08
HOXC9-201ENST00000303450 NDUFA12Q9UI09 145 aa15.58■□□□□ 0.08
HOXC9-201ENST00000303450 LGALS3P17931 250 aaKnown RBP15.57■□□□□ 0.08
HOXC9-201ENST00000303450 KIAA1109Q2LD37 5005 aa15.56■□□□□ 0.08
HOXC9-201ENST00000303450 MYMXA0A1B0GTQ4 84 aa15.55■□□□□ 0.08
HOXC9-201ENST00000303450 ERG28Q9UKR5 140 aa15.55■□□□□ 0.08
HOXC9-201ENST00000303450 A0A087WYN8 130 aa15.54■□□□□ 0.08
HOXC9-201ENST00000303450 PFN2P35080 140 aa15.54■□□□□ 0.08
HOXC9-201ENST00000303450 RYR1P21817 5038 aa15.53■□□□□ 0.08
HOXC9-201ENST00000303450 SCGB1D1O95968 90 aa15.53■□□□□ 0.08
HOXC9-201ENST00000303450 HERV-K104P63124 156 aa15.53■□□□□ 0.08
HOXC9-201ENST00000303450 NMUP48645 174 aa15.53■□□□□ 0.08
HOXC9-201ENST00000303450 COX17Q14061 63 aa15.52■□□□□ 0.07
HOXC9-201ENST00000303450 PLAC8Q9NZF1 115 aa15.5■□□□□ 0.07
HOXC9-201ENST00000303450 MEIG1Q5JSS6 88 aa15.49■□□□□ 0.07
HOXC9-201ENST00000303450 IGKV2D-26A0A0A0MRZ7 120 aa15.48■□□□□ 0.07
HOXC9-201ENST00000303450 XAGE1AQ9HD64 81 aa15.48■□□□□ 0.07
HOXC9-201ENST00000303450 SMR3BP02814 79 aaPredicted RBP15.48■□□□□ 0.07
HOXC9-201ENST00000303450 LINC00158P58513 81 aa15.48■□□□□ 0.07
HOXC9-201ENST00000303450 HSPG2P98160 4391 aa15.47■□□□□ 0.07
HOXC9-201ENST00000303450 LINC00587B1AMM8 73 aa15.47■□□□□ 0.07
HOXC9-201ENST00000303450 ANKRD39Q53RE8 183 aa15.47■□□□□ 0.07
HOXC9-201ENST00000303450 C9orf129Q5T035 196 aaKnown RBP15.47■□□□□ 0.07
HOXC9-201ENST00000303450 A0A0U1RRA0 63 aa15.46■□□□□ 0.07
HOXC9-201ENST00000303450 HSBP1L1C9JCN9 74 aa15.46■□□□□ 0.07
HOXC9-201ENST00000303450 A0A1W2PNN7 141 aa15.45■□□□□ 0.06
HOXC9-201ENST00000303450 SMIM13P0DJ93 91 aa15.45■□□□□ 0.06
HOXC9-201ENST00000303450 FAM168BA1KXE4 195 aa15.43■□□□□ 0.06
HOXC9-201ENST00000303450 ZNF815PA8K554 130 aa15.42■□□□□ 0.06
HOXC9-201ENST00000303450 FAM19A5Q7Z5A7 132 aaPredicted RBP15.42■□□□□ 0.06
HOXC9-201ENST00000303450 SND1-IT1Q9HBX3 110 aa15.42■□□□□ 0.06
HOXC9-201ENST00000303450 TTTY13Q9BZ97 58 aa15.41■□□□□ 0.06
HOXC9-201ENST00000303450 JOSD1Q15040 202 aaPredicted RBP15.4■□□□□ 0.06
HOXC9-201ENST00000303450 A0A0J9YXY3 114 aa15.39■□□□□ 0.05
HOXC9-201ENST00000303450 EPM2AB3EWF7 344 aa15.39■□□□□ 0.05
HOXC9-201ENST00000303450 LINC00528Q8N1L1 170 aa15.39■□□□□ 0.05
HOXC9-201ENST00000303450 Q8N1X5 172 aa15.38■□□□□ 0.05
HOXC9-201ENST00000303450 MIR7-3HGQ8N6C7 128 aa15.38■□□□□ 0.05
HOXC9-201ENST00000303450 FAM229AH3BQW9 127 aa15.36■□□□□ 0.05
HOXC9-201ENST00000303450 SERTAD4-AS1Q5TG53 156 aa15.36■□□□□ 0.05
HOXC9-201ENST00000303450 C7orf33Q8WU49 177 aa15.36■□□□□ 0.05
HOXC9-201ENST00000303450 KRTAP7-1Q8IUC3 87 aa15.35■□□□□ 0.05
HOXC9-201ENST00000303450 PCP2Q8IVA1 136 aa15.35■□□□□ 0.05
HOXC9-201ENST00000303450 M0QXV9 152 aa15.34■□□□□ 0.05
HOXC9-201ENST00000303450 PHF5AQ7RTV0 110 aaKnown RBP15.33■□□□□ 0.05
HOXC9-201ENST00000303450 DAND5Q8N907 189 aa15.33■□□□□ 0.05
HOXC9-201ENST00000303450 PLA2G2DQ9UNK4 145 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms