RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 SMIM1B2RUZ4 78 aa6.91□□□□□ -1.3
CLCC1-201ENST00000302500 Q8IZM0 81 aa6.91□□□□□ -1.3
CLCC1-201ENST00000302500 C7orf33Q8WU49 177 aa6.91□□□□□ -1.3
CLCC1-201ENST00000302500 TINCRA0A1B0GVN0 87 aa6.9□□□□□ -1.3
CLCC1-201ENST00000302500 APOC3P02656 99 aa6.9□□□□□ -1.3
CLCC1-201ENST00000302500 HERVK_113P63121 156 aa6.9□□□□□ -1.3
CLCC1-201ENST00000302500 ODF1Q14990 250 aa6.9□□□□□ -1.3
CLCC1-201ENST00000302500 PDZD11Q5EBL8 140 aa6.9□□□□□ -1.3
CLCC1-201ENST00000302500 PHF5AQ7RTV0 110 aaKnown RBP6.9□□□□□ -1.3
CLCC1-201ENST00000302500 LINC01600Q96MT4 127 aa6.9□□□□□ -1.3
CLCC1-201ENST00000302500 C2orf88Q9BSF0 95 aa6.9□□□□□ -1.3
CLCC1-201ENST00000302500 CST9LQ9H4G1 147 aa6.9□□□□□ -1.3
CLCC1-201ENST00000302500 PSORS1C2Q9UIG4 136 aa6.9□□□□□ -1.3
CLCC1-201ENST00000302500 NDUFC2-KCTD14E9PQ53 114 aa6.89□□□□□ -1.31
CLCC1-201ENST00000302500 KRTAP10-8P60410 259 aa6.89□□□□□ -1.31
CLCC1-201ENST00000302500 RPL18AQ02543 176 aaKnown RBP6.89□□□□□ -1.31
CLCC1-201ENST00000302500 Q6ZN92 141 aa6.89□□□□□ -1.31
CLCC1-201ENST00000302500 SVBPQ8N300 66 aa6.89□□□□□ -1.31
CLCC1-201ENST00000302500 DPH3Q96FX2 82 aa6.89□□□□□ -1.31
CLCC1-201ENST00000302500 LINC01549A6NIU2 74 aa6.88□□□□□ -1.31
CLCC1-201ENST00000302500 G0S2P27469 103 aa6.88□□□□□ -1.31
CLCC1-201ENST00000302500 FABP9Q0Z7S8 132 aa6.88□□□□□ -1.31
CLCC1-201ENST00000302500 SCGB3A1Q96QR1 104 aa6.88□□□□□ -1.31
CLCC1-201ENST00000302500 IGLV5-39A0A0G2JS06 123 aa6.87□□□□□ -1.31
CLCC1-201ENST00000302500 SNAPINO95295 136 aa6.87□□□□□ -1.31
CLCC1-201ENST00000302500 PAPPA-AS1Q5QFB9 102 aa6.87□□□□□ -1.31
CLCC1-201ENST00000302500 SPINK6Q6UWN8 80 aa6.87□□□□□ -1.31
CLCC1-201ENST00000302500 IGLC3P0DOY3 106 aa6.86□□□□□ -1.31
CLCC1-201ENST00000302500 LINC00310P59036 64 aa6.86□□□□□ -1.31
CLCC1-201ENST00000302500 SEC11AP67812 179 aa6.86□□□□□ -1.31
CLCC1-201ENST00000302500 PMVKQ15126 192 aa6.86□□□□□ -1.31
CLCC1-201ENST00000302500 SERTAD4-AS1Q5TG53 156 aa6.86□□□□□ -1.31
CLCC1-201ENST00000302500 TRAPPC1Q9Y5R8 145 aa6.86□□□□□ -1.31
CLCC1-201ENST00000302500 LINC00614P0C842 121 aa6.85□□□□□ -1.31
CLCC1-201ENST00000302500 F8VRH5 84 aa6.84□□□□□ -1.31
CLCC1-201ENST00000302500 PMCHL1Q16048 86 aa6.84□□□□□ -1.31
CLCC1-201ENST00000302500 FA2HQ7L5A8 372 aa6.84□□□□□ -1.31
CLCC1-201ENST00000302500 CBLN2Q8IUK8 224 aa6.84□□□□□ -1.31
CLCC1-201ENST00000302500 KRTAP1-4P0C5Y4 121 aa6.83□□□□□ -1.32
CLCC1-201ENST00000302500 ZNF22P17026 224 aaPredicted RBP6.83□□□□□ -1.32
CLCC1-201ENST00000302500 GAGE2EQ4V326 116 aa6.83□□□□□ -1.32
CLCC1-201ENST00000302500 GAGE2DQ9UEU5 116 aa6.83□□□□□ -1.32
CLCC1-201ENST00000302500 HBDP02042 147 aa6.82□□□□□ -1.32
CLCC1-201ENST00000302500 FAM19A5Q7Z5A7 132 aaPredicted RBP6.82□□□□□ -1.32
CLCC1-201ENST00000302500 LINC00469Q8N7U9 141 aa6.82□□□□□ -1.32
CLCC1-201ENST00000302500 GEMIN7Q9H840 131 aaKnown RBP6.82□□□□□ -1.32
CLCC1-201ENST00000302500 LPAP08519 4548 aa6.82□□□□□ -1.32
CLCC1-201ENST00000302500 M0QXV9 152 aa6.81□□□□□ -1.32
CLCC1-201ENST00000302500 IGLV7-43P04211 117 aa6.81□□□□□ -1.32
CLCC1-201ENST00000302500 SPINK8P0C7L1 97 aa6.81□□□□□ -1.32
CLCC1-201ENST00000302500 CXCL5P42830 114 aa6.81□□□□□ -1.32
CLCC1-201ENST00000302500 C6orf226Q5I0X4 101 aa6.81□□□□□ -1.32
CLCC1-201ENST00000302500 SLC7A5P1Q8MH63 180 aa6.81□□□□□ -1.32
CLCC1-201ENST00000302500 COX7B2Q8TF08 81 aa6.81□□□□□ -1.32
CLCC1-201ENST00000302500 TOMM7Q9P0U1 55 aa6.81□□□□□ -1.32
CLCC1-201ENST00000302500 C11orf86A6NJI1 115 aa6.8□□□□□ -1.32
CLCC1-201ENST00000302500 NDUFA5Q16718 116 aa6.8□□□□□ -1.32
CLCC1-201ENST00000302500 PACRGQ96M98 296 aaPredicted RBP6.8□□□□□ -1.32
CLCC1-201ENST00000302500 XAGE1AQ9HD64 81 aa6.8□□□□□ -1.32
CLCC1-201ENST00000302500 SMCO4Q9NRQ5 59 aa6.8□□□□□ -1.32
CLCC1-201ENST00000302500 PLA2G2DQ9UNK4 145 aa6.8□□□□□ -1.32
CLCC1-201ENST00000302500 IGLV5-37A0A075B6J1 123 aa6.79□□□□□ -1.32
CLCC1-201ENST00000302500 CKS1BP61024 79 aa6.79□□□□□ -1.32
CLCC1-201ENST00000302500 C1orf137Q5JT78 98 aa6.79□□□□□ -1.32
CLCC1-201ENST00000302500 Q8NDZ9 215 aa6.79□□□□□ -1.32
CLCC1-201ENST00000302500 ZNF625Q96I27 306 aaPredicted RBP6.79□□□□□ -1.32
CLCC1-201ENST00000302500 TP73-AS1Q9UF72 201 aa6.79□□□□□ -1.32
CLCC1-201ENST00000302500 COLCA2A8K830 154 aa6.78□□□□□ -1.32
CLCC1-201ENST00000302500 PRSS2P07478 247 aa6.78□□□□□ -1.32
CLCC1-201ENST00000302500 CHCHD1Q96BP2 118 aaKnown RBP6.78□□□□□ -1.32
CLCC1-201ENST00000302500 C22orf24Q9Y442 160 aa6.78□□□□□ -1.32
CLCC1-201ENST00000302500 TRAV12-1A0A0B4J245 112 aa6.77□□□□□ -1.32
CLCC1-201ENST00000302500 H0Y9J4 135 aa6.77□□□□□ -1.32
CLCC1-201ENST00000302500 KRTAP13-1Q8IUC0 172 aa6.77□□□□□ -1.32
CLCC1-201ENST00000302500 NUPR1O60356 82 aa6.76□□□□□ -1.33
CLCC1-201ENST00000302500 ATP5LO75964 103 aa6.76□□□□□ -1.33
CLCC1-201ENST00000302500 TRGC2P03986 189 aa6.76□□□□□ -1.33
CLCC1-201ENST00000302500 RAB5BP61020 215 aa6.76□□□□□ -1.33
CLCC1-201ENST00000302500 REG3GQ6UW15 175 aa6.76□□□□□ -1.33
CLCC1-201ENST00000302500 RNF213Q63HN8 5207 aa6.75□□□□□ -1.33
CLCC1-201ENST00000302500 TMEM223A0PJW6 202 aa6.75□□□□□ -1.33
CLCC1-201ENST00000302500 BAGE3Q86Y29 109 aa6.75□□□□□ -1.33
CLCC1-201ENST00000302500 H3BRM9 83 aa6.74□□□□□ -1.33
CLCC1-201ENST00000302500 VPREB1P12018 145 aa6.74□□□□□ -1.33
CLCC1-201ENST00000302500 MRPL55Q7Z7F7 128 aaKnown RBP6.74□□□□□ -1.33
CLCC1-201ENST00000302500 FAM19A2Q8N3H0 131 aa6.74□□□□□ -1.33
CLCC1-201ENST00000302500 IFI27L1Q96BM0 104 aa6.74□□□□□ -1.33
CLCC1-201ENST00000302500 LINC00167Q96N53 147 aa6.73□□□□□ -1.33
CLCC1-201ENST00000302500 CHTOPQ9Y3Y2 248 aaKnown RBP6.73□□□□□ -1.33
CLCC1-201ENST00000302500 ZNF861PO60384 105 aa6.72□□□□□ -1.33
CLCC1-201ENST00000302500 SERF1AO75920 110 aa6.72□□□□□ -1.33
CLCC1-201ENST00000302500 COX17Q14061 63 aa6.72□□□□□ -1.33
CLCC1-201ENST00000302500 PRR26Q8N8Z3 221 aa6.72□□□□□ -1.33
CLCC1-201ENST00000302500 DIRC1Q969H9 104 aa6.72□□□□□ -1.33
CLCC1-201ENST00000302500 SND1-IT1Q9HBX3 110 aa6.72□□□□□ -1.33
CLCC1-201ENST00000302500 ERG28Q9UKR5 140 aa6.72□□□□□ -1.33
CLCC1-201ENST00000302500 SCO1O75880 301 aa6.71□□□□□ -1.34
CLCC1-201ENST00000302500 NDUFA6P56556 154 aa6.7□□□□□ -1.34
CLCC1-201ENST00000302500 TSPEAR-AS2P59090 65 aa6.7□□□□□ -1.34
CLCC1-201ENST00000302500 UBE2BP63146 152 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms