RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 TRAV26-1A0A087WT03 109 aa9.48□□□□□ -0.89
CDH8-201ENST00000299345 LINC00612Q8N6U2 182 aa9.48□□□□□ -0.89
CDH8-201ENST00000299345 ATRQ13535 2644 aa9.47□□□□□ -0.89
CDH8-201ENST00000299345 A0A1B0GUV1 79 aa9.47□□□□□ -0.89
CDH8-201ENST00000299345 C15orf53Q8NAA6 179 aa9.47□□□□□ -0.89
CDH8-201ENST00000299345 NBPF19A0A087WUL8 3843 aa9.47□□□□□ -0.89
CDH8-201ENST00000299345 SPART-AS1P0CW21 52 aa9.47□□□□□ -0.89
CDH8-201ENST00000299345 SPATA3Q8NHX4 192 aa9.47□□□□□ -0.89
CDH8-201ENST00000299345 TRACP01848 142 aa9.46□□□□□ -0.89
CDH8-201ENST00000299345 TTC32Q5I0X7 151 aa9.46□□□□□ -0.9
CDH8-201ENST00000299345 LINC00337Q8N6G1 96 aa9.46□□□□□ -0.9
CDH8-201ENST00000299345 MRPL23Q16540 153 aaKnown RBP9.45□□□□□ -0.9
CDH8-201ENST00000299345 Q9HAA7 133 aa9.45□□□□□ -0.9
CDH8-201ENST00000299345 MIFP14174 115 aa9.44□□□□□ -0.9
CDH8-201ENST00000299345 REG3AQ06141 175 aa9.44□□□□□ -0.9
CDH8-201ENST00000299345 CHCHD10Q8WYQ3 142 aaPredicted RBP9.44□□□□□ -0.9
CDH8-201ENST00000299345 RPL28P46779 137 aaKnown RBP9.44□□□□□ -0.9
CDH8-201ENST00000299345 ANAPC13Q9BS18 74 aa9.44□□□□□ -0.9
CDH8-201ENST00000299345 Q8IZM0 81 aa9.43□□□□□ -0.9
CDH8-201ENST00000299345 SMIM11BQ8TCY0 68 aa9.43□□□□□ -0.9
CDH8-201ENST00000299345 LINC01600Q96MT4 127 aa9.43□□□□□ -0.9
CDH8-201ENST00000299345 H0YGX0 51 aa9.43□□□□□ -0.9
CDH8-201ENST00000299345 CD164L2Q6UWJ8 174 aa9.43□□□□□ -0.9
CDH8-201ENST00000299345 PPDPFQ9H3Y8 114 aa9.42□□□□□ -0.9
CDH8-201ENST00000299345 IGKV2-28A0A075B6P5 120 aa9.42□□□□□ -0.9
CDH8-201ENST00000299345 IGKV2D-28P01615 120 aa9.42□□□□□ -0.9
CDH8-201ENST00000299345 INAFM2P0DMQ5 153 aa9.41□□□□□ -0.9
CDH8-201ENST00000299345 FAM218AQ96MZ4 157 aa9.41□□□□□ -0.9
CDH8-201ENST00000299345 CELA1Q9UNI1 258 aa9.41□□□□□ -0.9
CDH8-201ENST00000299345 IGHV4-30-4P0DP06 118 aa9.4□□□□□ -0.9
CDH8-201ENST00000299345 CXCL5P42830 114 aa9.4□□□□□ -0.91
CDH8-201ENST00000299345 LECT2O14960 151 aa9.39□□□□□ -0.91
CDH8-201ENST00000299345 ACYP1P07311 99 aa9.39□□□□□ -0.91
CDH8-201ENST00000299345 Q8N3U1 123 aa9.39□□□□□ -0.91
CDH8-201ENST00000299345 KLK12Q9UKR0 248 aa9.39□□□□□ -0.91
CDH8-201ENST00000299345 AKAP9Q99996 3911 aa9.39□□□□□ -0.91
CDH8-201ENST00000299345 CITED1Q99966 193 aa9.39□□□□□ -0.91
CDH8-201ENST00000299345 FAM240AA0A1B0GVK7 77 aa9.38□□□□□ -0.91
CDH8-201ENST00000299345 GAGE2AQ6NT46 116 aa9.38□□□□□ -0.91
CDH8-201ENST00000299345 Q8NAQ8 132 aa9.38□□□□□ -0.91
CDH8-201ENST00000299345 NSD1Q96L73 2696 aaPredicted RBP9.37□□□□□ -0.91
CDH8-201ENST00000299345 LINC01561Q8N1V8 128 aa9.37□□□□□ -0.91
CDH8-201ENST00000299345 S100A7L2Q5SY68 101 aa9.36□□□□□ -0.91
CDH8-201ENST00000299345 LELP1Q5T871 98 aa9.36□□□□□ -0.91
CDH8-201ENST00000299345 A0A087WYN8 130 aa9.36□□□□□ -0.91
CDH8-201ENST00000299345 SPAG11BQ08648 103 aa9.36□□□□□ -0.91
CDH8-201ENST00000299345 ANK3Q12955 4377 aaKnown RBP9.36□□□□□ -0.91
CDH8-201ENST00000299345 DEFB121Q5J5C9 76 aa9.35□□□□□ -0.91
CDH8-201ENST00000299345 KMT2BQ9UMN6 2715 aaPredicted RBP9.35□□□□□ -0.91
CDH8-201ENST00000299345 PRR3P79522 188 aaKnown RBP9.35□□□□□ -0.91
CDH8-201ENST00000299345 C9orf116Q5BN46 136 aaPredicted RBP9.35□□□□□ -0.91
CDH8-201ENST00000299345 LINC00526Q96FQ7 95 aa9.34□□□□□ -0.91
CDH8-201ENST00000299345 TMEM126AQ9H061 195 aa9.34□□□□□ -0.91
CDH8-201ENST00000299345 VWFP04275 2813 aa9.34□□□□□ -0.92
CDH8-201ENST00000299345 FLNBO75369 2602 aaKnown RBP9.34□□□□□ -0.92
CDH8-201ENST00000299345 TEP1Q99973 2627 aaKnown RBP9.34□□□□□ -0.92
CDH8-201ENST00000299345 COX17Q14061 63 aa9.33□□□□□ -0.92
CDH8-201ENST00000299345 OXLD1Q5BKU9 147 aa9.33□□□□□ -0.92
CDH8-201ENST00000299345 WFDC9Q8NEX5 89 aa9.33□□□□□ -0.92
CDH8-201ENST00000299345 SLPIP03973 132 aa9.33□□□□□ -0.92
CDH8-201ENST00000299345 NDUFV3P56181 108 aaKnown RBP9.32□□□□□ -0.92
CDH8-201ENST00000299345 ORMDL1Q9P0S3 153 aa9.32□□□□□ -0.92
CDH8-201ENST00000299345 NCR3O14931 201 aa9.32□□□□□ -0.92
CDH8-201ENST00000299345 F8P00451 2351 aa9.32□□□□□ -0.92
CDH8-201ENST00000299345 HIVEP1P15822 2718 aa9.31□□□□□ -0.92
CDH8-201ENST00000299345 KIAA0087Q14695 138 aa9.31□□□□□ -0.92
CDH8-201ENST00000299345 Q6Q795 121 aa9.31□□□□□ -0.92
CDH8-201ENST00000299345 UNQ6190/PRO20217Q6UXQ8 127 aa9.31□□□□□ -0.92
CDH8-201ENST00000299345 C14orf132Q9NPU4 83 aa9.31□□□□□ -0.92
CDH8-201ENST00000299345 C3orf56Q8N813 242 aa9.3□□□□□ -0.92
CDH8-201ENST00000299345 LINC00643Q86TS7 51 aa9.3□□□□□ -0.92
CDH8-201ENST00000299345 C6orf223Q8N319 242 aa9.3□□□□□ -0.92
CDH8-201ENST00000299345 RETNQ9HD89 108 aa9.29□□□□□ -0.92
CDH8-201ENST00000299345 CYSRT1A8MQ03 144 aa9.29□□□□□ -0.92
CDH8-201ENST00000299345 NDUFC2O95298 119 aa9.29□□□□□ -0.92
CDH8-201ENST00000299345 OTOGQ6ZRI0 2925 aa9.28□□□□□ -0.92
CDH8-201ENST00000299345 ZNF561-AS1K7EIQ3 104 aa9.28□□□□□ -0.92
CDH8-201ENST00000299345 KLK5Q9Y337 293 aaPredicted RBP9.28□□□□□ -0.92
CDH8-201ENST00000299345 TENM1Q9UKZ4 2725 aa9.28□□□□□ -0.92
CDH8-201ENST00000299345 LYPD5Q6UWN5 251 aa9.28□□□□□ -0.92
CDH8-201ENST00000299345 KPRPQ5T749 579 aaPredicted RBP9.27□□□□□ -0.93
CDH8-201ENST00000299345 C6orf99Q4VX62 202 aa9.27□□□□□ -0.93
CDH8-201ENST00000299345 C10orf25Q5T742 122 aa9.26□□□□□ -0.93
CDH8-201ENST00000299345 RPL18AQ02543 176 aaKnown RBP9.26□□□□□ -0.93
CDH8-201ENST00000299345 CAMK2N2Q96S95 79 aa9.24□□□□□ -0.93
CDH8-201ENST00000299345 HIGD2BQ4VC39 106 aa9.24□□□□□ -0.93
CDH8-201ENST00000299345 Q6ZTC4 211 aa9.24□□□□□ -0.93
CDH8-201ENST00000299345 FAM236AA0A1B0GUQ0 79 aa9.23□□□□□ -0.93
CDH8-201ENST00000299345 FAM236BA0A1B0GV22 79 aa9.23□□□□□ -0.93
CDH8-201ENST00000299345 ENHOQ6UWT2 76 aa9.23□□□□□ -0.93
CDH8-201ENST00000299345 B5MCH6 92 aa9.23□□□□□ -0.93
CDH8-201ENST00000299345 WFDC10BQ8IUB3 73 aa9.23□□□□□ -0.93
CDH8-201ENST00000299345 Q8N814 137 aa9.23□□□□□ -0.93
CDH8-201ENST00000299345 XAGE1AQ9HD64 81 aa9.23□□□□□ -0.93
CDH8-201ENST00000299345 A0A1B0GX51 115 aa9.23□□□□□ -0.93
CDH8-201ENST00000299345 TMEM256-PLSCR3K7ERE1 68 aa9.23□□□□□ -0.93
CDH8-201ENST00000299345 TRBV7-7A0A0K0K1E9 115 aa9.22□□□□□ -0.93
CDH8-201ENST00000299345 MUC7Q8TAX7 377 aa9.22□□□□□ -0.93
CDH8-201ENST00000299345 IMUPQ9GZP8 106 aa9.22□□□□□ -0.93
CDH8-201ENST00000299345 PRR34Q9NV39 138 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms