RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 IGLV10-54A0A075B6I4 117 aa8.05□□□□□ -1.12
TRUB1-201ENST00000298746 SS18Q15532 418 aa8.05□□□□□ -1.12
TRUB1-201ENST00000298746 WFDC10AQ9H1F0 79 aa8.05□□□□□ -1.12
TRUB1-201ENST00000298746 FBN2P35556 2912 aa8.05□□□□□ -1.12
TRUB1-201ENST00000298746 JMJD7-PLA2G4BH0Y9G9 81 aa8.05□□□□□ -1.12
TRUB1-201ENST00000298746 C4orf26Q17RF5 130 aa8.05□□□□□ -1.12
TRUB1-201ENST00000298746 UPK3BQ9BT76 320 aa8.04□□□□□ -1.12
TRUB1-201ENST00000298746 TEX15Q9BXT5 2789 aa8.04□□□□□ -1.12
TRUB1-201ENST00000298746 CCKP06307 115 aa8.04□□□□□ -1.12
TRUB1-201ENST00000298746 TRBV6-4A0A1B0GX49 114 aa8.03□□□□□ -1.12
TRUB1-201ENST00000298746 CSMD2Q7Z408 3487 aa8.03□□□□□ -1.12
TRUB1-201ENST00000298746 NBEAL2Q6ZNJ1 2754 aa8.03□□□□□ -1.12
TRUB1-201ENST00000298746 TRBV6-8A0A0A6YYG3 113 aa8.03□□□□□ -1.12
TRUB1-201ENST00000298746 TMEM256-PLSCR3K7ERE1 68 aa8.03□□□□□ -1.12
TRUB1-201ENST00000298746 RPS28P62857 69 aaKnown RBP8.02□□□□□ -1.13
TRUB1-201ENST00000298746 IGHV3OR16-9A0A0B4J2B5 98 aa8.02□□□□□ -1.13
TRUB1-201ENST00000298746 DSCR9P59020 149 aa8.02□□□□□ -1.13
TRUB1-201ENST00000298746 C6orf99Q4VX62 202 aa8.02□□□□□ -1.13
TRUB1-201ENST00000298746 C4orf3Q8WVX3 66 aa8.02□□□□□ -1.13
TRUB1-201ENST00000298746 PRB1P04280 392 aa8.01□□□□□ -1.13
TRUB1-201ENST00000298746 Q6YL49 198 aa8.01□□□□□ -1.13
TRUB1-201ENST00000298746 MXRA5Q9NR99 2828 aa8.01□□□□□ -1.13
TRUB1-201ENST00000298746 NOTCH2Q04721 2471 aa8.01□□□□□ -1.13
TRUB1-201ENST00000298746 FHL2Q14192 279 aa8.01□□□□□ -1.13
TRUB1-201ENST00000298746 GCN1Q92616 2671 aaKnown RBP8.01□□□□□ -1.13
TRUB1-201ENST00000298746 VPS13CQ709C8 3753 aa8.01□□□□□ -1.13
TRUB1-201ENST00000298746 LINC00959A0A1B0GUT2 108 aa8.01□□□□□ -1.13
TRUB1-201ENST00000298746 NF1P21359 2839 aa8□□□□□ -1.13
TRUB1-201ENST00000298746 A0A087WZ39 114 aa8□□□□□ -1.13
TRUB1-201ENST00000298746 CCL24O00175 119 aa8□□□□□ -1.13
TRUB1-201ENST00000298746 GYPEP15421 78 aa8□□□□□ -1.13
TRUB1-201ENST00000298746 C16orf74Q96GX8 76 aa8□□□□□ -1.13
TRUB1-201ENST00000298746 SNURFQ9Y675 71 aa8□□□□□ -1.13
TRUB1-201ENST00000298746 J3QLI3 93 aa8□□□□□ -1.13
TRUB1-201ENST00000298746 RBM3P98179 157 aaKnown RBP8□□□□□ -1.13
TRUB1-201ENST00000298746 C9orf116Q5BN46 136 aaPredicted RBP8□□□□□ -1.13
TRUB1-201ENST00000298746 Q8N814 137 aa8□□□□□ -1.13
TRUB1-201ENST00000298746 UTP20O75691 2785 aaKnown RBP7.99□□□□□ -1.13
TRUB1-201ENST00000298746 FAM236DA0A1B0GTK5 79 aa7.99□□□□□ -1.13
TRUB1-201ENST00000298746 A8MTW9 85 aa7.99□□□□□ -1.13
TRUB1-201ENST00000298746 FAM236CP0DP71 79 aa7.99□□□□□ -1.13
TRUB1-201ENST00000298746 ZNF462Q96JM2 2506 aa7.99□□□□□ -1.13
TRUB1-201ENST00000298746 ESM1Q9NQ30 184 aa7.99□□□□□ -1.13
TRUB1-201ENST00000298746 SCXQ7RTU7 201 aa7.99□□□□□ -1.13
TRUB1-201ENST00000298746 FAM19A3Q7Z5A8 133 aa7.98□□□□□ -1.13
TRUB1-201ENST00000298746 LINC00269Q8N2A0 174 aa7.98□□□□□ -1.13
TRUB1-201ENST00000298746 ANGP03950 147 aaKnown RBP7.98□□□□□ -1.13
TRUB1-201ENST00000298746 NDUFC2O95298 119 aa7.97□□□□□ -1.13
TRUB1-201ENST00000298746 ATP5EP2Q5VTU8 51 aa7.97□□□□□ -1.13
TRUB1-201ENST00000298746 HTN3P15516 51 aa7.95□□□□□ -1.14
TRUB1-201ENST00000298746 OXTP01178 125 aa7.94□□□□□ -1.14
TRUB1-201ENST00000298746 TRAV25A0A0B4J276 109 aa7.94□□□□□ -1.14
TRUB1-201ENST00000298746 WFDC11Q8NEX6 87 aa7.94□□□□□ -1.14
TRUB1-201ENST00000298746 CFAP46Q8IYW2 2715 aa7.94□□□□□ -1.14
TRUB1-201ENST00000298746 C1orf43Q9BWL3 253 aa7.93□□□□□ -1.14
TRUB1-201ENST00000298746 Q6ZQY7 126 aa7.93□□□□□ -1.14
TRUB1-201ENST00000298746 OBSCN-AS1Q96MR7 158 aa7.93□□□□□ -1.14
TRUB1-201ENST00000298746 DEFB4AO15263 64 aa7.92□□□□□ -1.14
TRUB1-201ENST00000298746 IGHV4-31P0DP07 118 aa7.92□□□□□ -1.14
TRUB1-201ENST00000298746 Q8IZM0 81 aa7.92□□□□□ -1.14
TRUB1-201ENST00000298746 NIPBLQ6KC79 2804 aaeCLIP7.92□□□□□ -1.14
TRUB1-201ENST00000298746 CHCHD10Q8WYQ3 142 aaPredicted RBP7.91□□□□□ -1.14
TRUB1-201ENST00000298746 RMI2Q96E14 147 aa7.91□□□□□ -1.14
TRUB1-201ENST00000298746 SETXQ7Z333 2677 aaKnown RBP7.91□□□□□ -1.14
TRUB1-201ENST00000298746 F8WEM9 126 aa7.9□□□□□ -1.14
TRUB1-201ENST00000298746 ZNF843Q8N446 348 aa7.9□□□□□ -1.14
TRUB1-201ENST00000298746 BBC3Q96PG8 261 aaPredicted RBP7.9□□□□□ -1.14
TRUB1-201ENST00000298746 FLNAP21333 2647 aaKnown RBP7.9□□□□□ -1.15
TRUB1-201ENST00000298746 CMC4P56277 68 aaPredicted RBP7.9□□□□□ -1.15
TRUB1-201ENST00000298746 IL17DQ8TAD2 202 aa7.9□□□□□ -1.15
TRUB1-201ENST00000298746 APCP25054 2843 aa7.89□□□□□ -1.15
TRUB1-201ENST00000298746 TRAV7A0A075B6U4 112 aa7.89□□□□□ -1.15
TRUB1-201ENST00000298746 LINC01547P58512 204 aaPredicted RBP7.89□□□□□ -1.15
TRUB1-201ENST00000298746 XAGE1AQ9HD64 81 aa7.89□□□□□ -1.15
TRUB1-201ENST00000298746 TRAV10A0A0B4J240 114 aa7.88□□□□□ -1.15
TRUB1-201ENST00000298746 ZNF561-AS1K7EIQ3 104 aa7.88□□□□□ -1.15
TRUB1-201ENST00000298746 Q6ZVQ6 151 aa7.88□□□□□ -1.15
TRUB1-201ENST00000298746 LY6G6DO95868 133 aa7.88□□□□□ -1.15
TRUB1-201ENST00000298746 REG3AQ06141 175 aa7.88□□□□□ -1.15
TRUB1-201ENST00000298746 SPAG11BQ08648 103 aa7.88□□□□□ -1.15
TRUB1-201ENST00000298746 Q8N3U1 123 aa7.88□□□□□ -1.15
TRUB1-201ENST00000298746 UNQ6190/PRO20217Q6UXQ8 127 aa7.88□□□□□ -1.15
TRUB1-201ENST00000298746 PKIGQ9Y2B9 76 aa7.88□□□□□ -1.15
TRUB1-201ENST00000298746 A0A096LNT2 108 aa7.87□□□□□ -1.15
TRUB1-201ENST00000298746 NDUFC2-KCTD14E9PQ53 114 aa7.87□□□□□ -1.15
TRUB1-201ENST00000298746 M0R2N4 97 aa7.87□□□□□ -1.15
TRUB1-201ENST00000298746 LINC00575Q6W349 94 aa7.87□□□□□ -1.15
TRUB1-201ENST00000298746 C6orf223Q8N319 242 aa7.87□□□□□ -1.15
TRUB1-201ENST00000298746 NANOS2P60321 138 aaKnown RBP7.87□□□□□ -1.15
TRUB1-201ENST00000298746 DAD1P61803 113 aa7.87□□□□□ -1.15
TRUB1-201ENST00000298746 PRO0255Q9UI72 69 aa7.87□□□□□ -1.15
TRUB1-201ENST00000298746 F8P00451 2351 aa7.87□□□□□ -1.15
TRUB1-201ENST00000298746 CD164L2Q6UWJ8 174 aa7.87□□□□□ -1.15
TRUB1-201ENST00000298746 LINC01006Q8NI28 216 aa7.87□□□□□ -1.15
TRUB1-201ENST00000298746 CR1P17927 2039 aa7.86□□□□□ -1.15
TRUB1-201ENST00000298746 PLAC8L1A1L4L8 177 aa7.86□□□□□ -1.15
TRUB1-201ENST00000298746 GIG44P09565 113 aaPredicted RBP7.86□□□□□ -1.15
TRUB1-201ENST00000298746 SERP1Q9Y6X1 66 aa7.86□□□□□ -1.15
TRUB1-201ENST00000298746 DNAJC9-AS1A6NH13 148 aa7.85□□□□□ -1.15
TRUB1-201ENST00000298746 Q5XG85 94 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 229.8 ms