RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 ATP5LO75964 103 aa15.8■□□□□ 0.12
PDF-201ENST00000288022 IGLV5-45A0A087WSX0 123 aa15.79■□□□□ 0.12
PDF-201ENST00000288022 BAGE3Q86Y29 109 aa15.79■□□□□ 0.12
PDF-201ENST00000288022 SMIM1B2RUZ4 78 aa15.78■□□□□ 0.12
PDF-201ENST00000288022 TLX1NBP0CAT3 122 aa15.78■□□□□ 0.12
PDF-201ENST00000288022 Q6ZRP5 223 aa15.78■□□□□ 0.12
PDF-201ENST00000288022 GAGE2EQ4V326 116 aa15.77■□□□□ 0.12
PDF-201ENST00000288022 GAGE2DQ9UEU5 116 aa15.77■□□□□ 0.12
PDF-201ENST00000288022 A0A1W2PNN7 141 aa15.76■□□□□ 0.11
PDF-201ENST00000288022 H3BRM9 83 aa15.76■□□□□ 0.11
PDF-201ENST00000288022 SPINK8P0C7L1 97 aa15.76■□□□□ 0.11
PDF-201ENST00000288022 C9orf116Q5BN46 136 aaPredicted RBP15.76■□□□□ 0.11
PDF-201ENST00000288022 COLCA2A8K830 154 aa15.75■□□□□ 0.11
PDF-201ENST00000288022 IGLC3P0DOY3 106 aa15.75■□□□□ 0.11
PDF-201ENST00000288022 FLG2Q5D862 2391 aaPredicted RBP15.75■□□□□ 0.11
PDF-201ENST00000288022 HSBP1O75506 76 aa15.74■□□□□ 0.11
PDF-201ENST00000288022 COX7B2Q8TF08 81 aa15.74■□□□□ 0.11
PDF-201ENST00000288022 NDUFC2-KCTD14E9PQ53 114 aa15.73■□□□□ 0.11
PDF-201ENST00000288022 CXCL5P42830 114 aa15.73■□□□□ 0.11
PDF-201ENST00000288022 HNRNPA3P51991 378 aaKnown RBP15.73■□□□□ 0.11
PDF-201ENST00000288022 F8VRH5 84 aa15.72■□□□□ 0.11
PDF-201ENST00000288022 SCO1O75880 301 aa15.7■□□□□ 0.1
PDF-201ENST00000288022 FAM19A2Q8N3H0 131 aa15.7■□□□□ 0.1
PDF-201ENST00000288022 IFI27L1Q96BM0 104 aa15.7■□□□□ 0.1
PDF-201ENST00000288022 ZNF22P17026 224 aaPredicted RBP15.69■□□□□ 0.1
PDF-201ENST00000288022 PRR3P79522 188 aaKnown RBP15.69■□□□□ 0.1
PDF-201ENST00000288022 FAM168BA1KXE4 195 aa15.68■□□□□ 0.1
PDF-201ENST00000288022 J3QL48 77 aa15.68■□□□□ 0.1
PDF-201ENST00000288022 FAM19A5Q7Z5A7 132 aaPredicted RBP15.68■□□□□ 0.1
PDF-201ENST00000288022 CHTOPQ9Y3Y2 248 aaKnown RBP15.68■□□□□ 0.1
PDF-201ENST00000288022 SERF1AO75920 110 aa15.67■□□□□ 0.1
PDF-201ENST00000288022 C11orf86A6NJI1 115 aa15.66■□□□□ 0.1
PDF-201ENST00000288022 TMEM170BQ5T4T1 132 aa15.66■□□□□ 0.1
PDF-201ENST00000288022 PHF5AQ7RTV0 110 aaKnown RBP15.66■□□□□ 0.1
PDF-201ENST00000288022 KRTAP29-1A8MX34 341 aaPredicted RBP15.64■□□□□ 0.09
PDF-201ENST00000288022 TRAV12-1A0A0B4J245 112 aa15.63■□□□□ 0.09
PDF-201ENST00000288022 C9orf129Q5T035 196 aaKnown RBP15.63■□□□□ 0.09
PDF-201ENST00000288022 MYCBP2O75592 4640 aa15.63■□□□□ 0.09
PDF-201ENST00000288022 IGLV5-39A0A0G2JS06 123 aa15.62■□□□□ 0.09
PDF-201ENST00000288022 LINC00310P59036 64 aa15.62■□□□□ 0.09
PDF-201ENST00000288022 XAGE1AQ9HD64 81 aa15.61■□□□□ 0.09
PDF-201ENST00000288022 H0Y8G0 127 aa15.6■□□□□ 0.09
PDF-201ENST00000288022 LEPROTL1O95214 131 aa15.6■□□□□ 0.09
PDF-201ENST00000288022 M0QXV9 152 aa15.59■□□□□ 0.09
PDF-201ENST00000288022 OXTP01178 125 aa15.59■□□□□ 0.09
PDF-201ENST00000288022 NUPR1O60356 82 aa15.58■□□□□ 0.08
PDF-201ENST00000288022 KRTAP7-1Q8IUC3 87 aa15.57■□□□□ 0.08
PDF-201ENST00000288022 PSORS1C2Q9UIG4 136 aa15.56■□□□□ 0.08
PDF-201ENST00000288022 FABP4P15090 132 aa15.55■□□□□ 0.08
PDF-201ENST00000288022 HSPB8Q9UJY1 196 aa15.55■□□□□ 0.08
PDF-201ENST00000288022 PKHD1L1Q86WI1 4243 aa15.55■□□□□ 0.08
PDF-201ENST00000288022 DMBT1Q9UGM3 2413 aaPredicted RBP15.55■□□□□ 0.08
PDF-201ENST00000288022 UBE2BP63146 152 aa15.54■□□□□ 0.08
PDF-201ENST00000288022 C1orf137Q5JT78 98 aa15.53■□□□□ 0.08
PDF-201ENST00000288022 SERTAD4-AS1Q5TG53 156 aa15.53■□□□□ 0.08
PDF-201ENST00000288022 TMEM223A0PJW6 202 aa15.52■□□□□ 0.08
PDF-201ENST00000288022 PFN2P35080 140 aa15.52■□□□□ 0.08
PDF-201ENST00000288022 HIST1H2BKO60814 126 aa15.51■□□□□ 0.07
PDF-201ENST00000288022 HIST1H2BJP06899 126 aa15.51■□□□□ 0.07
PDF-201ENST00000288022 HIST1H2BOP23527 126 aa15.51■□□□□ 0.07
PDF-201ENST00000288022 HIST1H2BBP33778 126 aa15.51■□□□□ 0.07
PDF-201ENST00000288022 HIST1H2BDP58876 126 aa15.51■□□□□ 0.07
PDF-201ENST00000288022 HIST1H2BCP62807 126 aa15.51■□□□□ 0.07
PDF-201ENST00000288022 ODF1Q14990 250 aa15.51■□□□□ 0.07
PDF-201ENST00000288022 HIST2H2BEQ16778 126 aa15.51■□□□□ 0.07
PDF-201ENST00000288022 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.51■□□□□ 0.07
PDF-201ENST00000288022 HIST1H2BHQ93079 126 aa15.51■□□□□ 0.07
PDF-201ENST00000288022 HIST1H2BNQ99877 126 aa15.51■□□□□ 0.07
PDF-201ENST00000288022 HIST1H2BMQ99879 126 aa15.51■□□□□ 0.07
PDF-201ENST00000288022 SPINK6Q6UWN8 80 aa15.5■□□□□ 0.07
PDF-201ENST00000288022 ZNF625Q96I27 306 aaPredicted RBP15.5■□□□□ 0.07
PDF-201ENST00000288022 SFTA2Q6UW10 78 aa15.49■□□□□ 0.07
PDF-201ENST00000288022 KRTAP11-1Q8IUC1 163 aa15.49■□□□□ 0.07
PDF-201ENST00000288022 ERG28Q9UKR5 140 aa15.48■□□□□ 0.07
PDF-201ENST00000288022 C22orf24Q9Y442 160 aa15.48■□□□□ 0.07
PDF-201ENST00000288022 SRSF9Q13242 221 aaKnown RBP eCLIP15.46■□□□□ 0.07
PDF-201ENST00000288022 LBHQ53QV2 105 aaPredicted RBP15.46■□□□□ 0.07
PDF-201ENST00000288022 PLNP26678 52 aa15.44■□□□□ 0.06
PDF-201ENST00000288022 MAP1LC3CQ9BXW4 147 aa15.44■□□□□ 0.06
PDF-201ENST00000288022 COX17Q14061 63 aa15.43■□□□□ 0.06
PDF-201ENST00000288022 PMCHL2Q9BQD1 86 aa15.43■□□□□ 0.06
PDF-201ENST00000288022 LRP1Q07954 4544 aaKnown RBP15.43■□□□□ 0.06
PDF-201ENST00000288022 IGLV7-43P04211 117 aa15.42■□□□□ 0.06
PDF-201ENST00000288022 MRPL55Q7Z7F7 128 aaKnown RBP15.42■□□□□ 0.06
PDF-201ENST00000288022 TP73-AS1Q9UF72 201 aa15.42■□□□□ 0.06
PDF-201ENST00000288022 PLA2G2DQ9UNK4 145 aa15.42■□□□□ 0.06
PDF-201ENST00000288022 DPM2O94777 84 aa15.41■□□□□ 0.06
PDF-201ENST00000288022 REG3GQ6UW15 175 aa15.41■□□□□ 0.06
PDF-201ENST00000288022 SND1-IT1Q9HBX3 110 aa15.4■□□□□ 0.06
PDF-201ENST00000288022 FAT3Q8TDW7 4589 aa15.39■□□□□ 0.06
PDF-201ENST00000288022 LINC00158P58513 81 aa15.39■□□□□ 0.05
PDF-201ENST00000288022 NKAPP1Q8N9T2 125 aa15.39■□□□□ 0.05
PDF-201ENST00000288022 IGKCP01834 107 aa15.38■□□□□ 0.05
PDF-201ENST00000288022 A0A0U1RRA0 63 aa15.37■□□□□ 0.05
PDF-201ENST00000288022 GAGE10A6NGK3 116 aa15.37■□□□□ 0.05
PDF-201ENST00000288022 HERC1Q15751 4861 aa15.37■□□□□ 0.05
PDF-201ENST00000288022 S100A1P23297 94 aa15.36■□□□□ 0.05
PDF-201ENST00000288022 HERVK_113P61574 105 aa15.36■□□□□ 0.05
PDF-201ENST00000288022 LINC00167Q96N53 147 aa15.36■□□□□ 0.05
PDF-201ENST00000288022 NDUFA12Q9UI09 145 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms