RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 PEA15Q15121 130 aa2.86□□□□□ -1.95
CD44-202ENST00000278385 Q6ZQT0 140 aa2.86□□□□□ -1.95
CD44-202ENST00000278385 SBSPONQ8IVN8 264 aa2.86□□□□□ -1.95
CD44-202ENST00000278385 TSKUQ8WUA8 353 aa2.86□□□□□ -1.95
CD44-202ENST00000278385 SLC50A1Q9BRV3 221 aa2.86□□□□□ -1.95
CD44-202ENST00000278385 DPH3P1Q9H4G8 78 aa2.86□□□□□ -1.95
CD44-202ENST00000278385 LY96Q9Y6Y9 160 aa2.86□□□□□ -1.95
CD44-202ENST00000278385 KIAA2026Q5HYC2 2103 aa2.86□□□□□ -1.95
CD44-202ENST00000278385 WNK1Q9H4A3 2382 aa2.85□□□□□ -1.95
CD44-202ENST00000278385 IGKV2D-26A0A0A0MRZ7 120 aa2.85□□□□□ -1.95
CD44-202ENST00000278385 IGHV1-24A0A0C4DH33 117 aa2.85□□□□□ -1.95
CD44-202ENST00000278385 FAM223BA6NKX1 122 aa2.85□□□□□ -1.95
CD44-202ENST00000278385 K7EP34 96 aa2.85□□□□□ -1.95
CD44-202ENST00000278385 PPYP01298 95 aa2.85□□□□□ -1.95
CD44-202ENST00000278385 IL5P05113 134 aa2.85□□□□□ -1.95
CD44-202ENST00000278385 KRTAP10-12P60413 245 aa2.85□□□□□ -1.95
CD44-202ENST00000278385 EIF4EBP1Q13541 118 aaPredicted RBP2.85□□□□□ -1.95
CD44-202ENST00000278385 Q6ZR54 194 aa2.85□□□□□ -1.95
CD44-202ENST00000278385 FAM223AQ8IWN6 122 aa2.85□□□□□ -1.95
CD44-202ENST00000278385 Q8N8P6 123 aa2.85□□□□□ -1.95
CD44-202ENST00000278385 TMEM167AQ8TBQ9 72 aa2.85□□□□□ -1.95
CD44-202ENST00000278385 TENM1Q9UKZ4 2725 aa2.85□□□□□ -1.95
CD44-202ENST00000278385 AGRNO00468 2067 aa2.84□□□□□ -1.95
CD44-202ENST00000278385 TRAV14DV4A0A0A6YYC5 116 aa2.84□□□□□ -1.95
CD44-202ENST00000278385 C16orf90A8MZG2 172 aa2.84□□□□□ -1.95
CD44-202ENST00000278385 ASIPP42127 132 aa2.84□□□□□ -1.95
CD44-202ENST00000278385 ATP5EP56381 51 aaPredicted RBP2.84□□□□□ -1.95
CD44-202ENST00000278385 FXYD4P59646 89 aa2.84□□□□□ -1.95
CD44-202ENST00000278385 KLK9Q2XQG4 91 aa2.84□□□□□ -1.95
CD44-202ENST00000278385 Q8NAQ8 132 aa2.84□□□□□ -1.95
CD44-202ENST00000278385 ST20-AS1Q8NBB2 130 aa2.84□□□□□ -1.95
CD44-202ENST00000278385 KLK9Q9UKQ9 250 aa2.84□□□□□ -1.95
CD44-202ENST00000278385 TRBV7-1A0A0A6YYK4 115 aa2.83□□□□□ -1.96
CD44-202ENST00000278385 TRAV3A0A0B4J244 114 aa2.83□□□□□ -1.96
CD44-202ENST00000278385 TRAV1-1A0A0B4J248 108 aa2.83□□□□□ -1.96
CD44-202ENST00000278385 A0A1B0GU33 70 aa2.83□□□□□ -1.96
CD44-202ENST00000278385 UBE2L5PA0A1B0GUS4 154 aa2.83□□□□□ -1.96
CD44-202ENST00000278385 C11orf86A6NJI1 115 aa2.83□□□□□ -1.96
CD44-202ENST00000278385 ZNF705FA8MVS1 300 aaPredicted RBP2.83□□□□□ -1.96
CD44-202ENST00000278385 ZNF861PO60384 105 aa2.83□□□□□ -1.96
CD44-202ENST00000278385 PRH1P02810 166 aa2.83□□□□□ -1.96
CD44-202ENST00000278385 NMBP08949 121 aa2.83□□□□□ -1.96
CD44-202ENST00000278385 APELAP0DMC3 54 aa2.83□□□□□ -1.96
CD44-202ENST00000278385 SNCAP37840 140 aa2.83□□□□□ -1.96
CD44-202ENST00000278385 UBE2L3P68036 154 aaKnown RBP2.83□□□□□ -1.96
CD44-202ENST00000278385 TDRG1Q3Y452 100 aa2.83□□□□□ -1.96
CD44-202ENST00000278385 LGALSLQ3ZCW2 172 aaPredicted RBP2.83□□□□□ -1.96
CD44-202ENST00000278385 C10orf55Q5SWW7 151 aa2.83□□□□□ -1.96
CD44-202ENST00000278385 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
CD44-202ENST00000278385 ZNF818PQ6ZRF7 136 aa2.83□□□□□ -1.96
CD44-202ENST00000278385 SH2D6Q7Z4S9 175 aa2.83□□□□□ -1.96
CD44-202ENST00000278385 C5orf38Q86SI9 138 aa2.83□□□□□ -1.96
CD44-202ENST00000278385 DNAH3Q8TD57 4116 aa2.82□□□□□ -1.96
CD44-202ENST00000278385 E7EUB6 86 aa2.82□□□□□ -1.96
CD44-202ENST00000278385 F8W1H4 67 aa2.82□□□□□ -1.96
CD44-202ENST00000278385 CRPP02741 224 aa2.82□□□□□ -1.96
CD44-202ENST00000278385 KRTAP10-5P60370 271 aa2.82□□□□□ -1.96
CD44-202ENST00000278385 DEFB114Q30KQ6 69 aa2.82□□□□□ -1.96
CD44-202ENST00000278385 C1orf134Q5TEV5 83 aa2.82□□□□□ -1.96
CD44-202ENST00000278385 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
CD44-202ENST00000278385 ALKAL2Q6UX46 152 aa2.82□□□□□ -1.96
CD44-202ENST00000278385 FAM19A2Q8N3H0 131 aa2.82□□□□□ -1.96
CD44-202ENST00000278385 DYNLRB2Q8TF09 96 aa2.82□□□□□ -1.96
CD44-202ENST00000278385 C14orf132Q9NPU4 83 aa2.82□□□□□ -1.96
CD44-202ENST00000278385 NDUFA4L2Q9NRX3 87 aa2.82□□□□□ -1.96
CD44-202ENST00000278385 TP53TG3Q9ULZ0 132 aa2.82□□□□□ -1.96
CD44-202ENST00000278385 PRKDCP78527 4128 aaKnown RBP2.82□□□□□ -1.96
CD44-202ENST00000278385 DNAH9Q9NYC9 4486 aa2.81□□□□□ -1.96
CD44-202ENST00000278385 IGLC7A0M8Q6 106 aa2.81□□□□□ -1.96
CD44-202ENST00000278385 C2orf70A6NJV1 201 aa2.81□□□□□ -1.96
CD44-202ENST00000278385 SLC25A6P12236 298 aa2.81□□□□□ -1.96
CD44-202ENST00000278385 CBLN1P23435 193 aa2.81□□□□□ -1.96
CD44-202ENST00000278385 ERHP84090 104 aaKnown RBP2.81□□□□□ -1.96
CD44-202ENST00000278385 DEFA5Q01523 94 aa2.81□□□□□ -1.96
CD44-202ENST00000278385 SSBP1Q04837 148 aaKnown RBP2.81□□□□□ -1.96
CD44-202ENST00000278385 Q5BKY6 102 aa2.81□□□□□ -1.96
CD44-202ENST00000278385 LINC00269Q8N2A0 174 aa2.81□□□□□ -1.96
CD44-202ENST00000278385 SMIM7Q9BQ49 75 aa2.81□□□□□ -1.96
CD44-202ENST00000278385 FXYD6Q9H0Q3 95 aa2.81□□□□□ -1.96
CD44-202ENST00000278385 UQCR10Q9UDW1 63 aa2.81□□□□□ -1.96
CD44-202ENST00000278385 MEGF8Q7Z7M0 2845 aa2.8□□□□□ -1.96
CD44-202ENST00000278385 NDUFA4O00483 81 aa2.8□□□□□ -1.96
CD44-202ENST00000278385 SFT2D2O95562 160 aa2.8□□□□□ -1.96
CD44-202ENST00000278385 IL4P05112 153 aa2.8□□□□□ -1.96
CD44-202ENST00000278385 WT1-ASQ06250 92 aa2.8□□□□□ -1.96
CD44-202ENST00000278385 LINC00322Q6ZN03 302 aaPredicted RBP2.8□□□□□ -1.96
CD44-202ENST00000278385 LINC00299Q6ZSB3 139 aa2.8□□□□□ -1.96
CD44-202ENST00000278385 C15orf53Q8NAA6 179 aa2.8□□□□□ -1.96
CD44-202ENST00000278385 C20orf166-AS1Q96NR2 134 aa2.8□□□□□ -1.96
CD44-202ENST00000278385 PMCHL2Q9BQD1 86 aa2.8□□□□□ -1.96
CD44-202ENST00000278385 TMEM14BQ9NUH8 114 aa2.8□□□□□ -1.96
CD44-202ENST00000278385 IGLV4-69A0A075B6H9 119 aa2.79□□□□□ -1.96
CD44-202ENST00000278385 PIGBOS1A0A0B4J2F0 54 aa2.79□□□□□ -1.96
CD44-202ENST00000278385 LOC107984156A0A0G2JMH3 177 aa2.79□□□□□ -1.96
CD44-202ENST00000278385 TRBV7-7A0A0K0K1E9 115 aa2.79□□□□□ -1.96
CD44-202ENST00000278385 IBA57-AS1B1ANH7 110 aa2.79□□□□□ -1.96
CD44-202ENST00000278385 K7EIM0 57 aa2.79□□□□□ -1.96
CD44-202ENST00000278385 APOC3P02656 99 aa2.79□□□□□ -1.96
CD44-202ENST00000278385 MGST1P10620 155 aaKnown RBP2.79□□□□□ -1.96
CD44-202ENST00000278385 PRCDQ00LT1 54 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 328.7 ms