RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 XAGE1AQ9HD64 81 aa10.27□□□□□ -0.77
TMEM47-201ENST00000275954 H0YGX0 51 aa10.26□□□□□ -0.77
TMEM47-201ENST00000275954 RPL18AQ02543 176 aaKnown RBP10.26□□□□□ -0.77
TMEM47-201ENST00000275954 FBN1P35555 2871 aaKnown RBP10.26□□□□□ -0.77
TMEM47-201ENST00000275954 IGHV4-30-4P0DP06 118 aa10.25□□□□□ -0.77
TMEM47-201ENST00000275954 OTOGQ6ZRI0 2925 aa10.25□□□□□ -0.77
TMEM47-201ENST00000275954 STAB2Q8WWQ8 2551 aa10.25□□□□□ -0.77
TMEM47-201ENST00000275954 A0A096LNT2 108 aa10.24□□□□□ -0.77
TMEM47-201ENST00000275954 C14orf132Q9NPU4 83 aa10.24□□□□□ -0.77
TMEM47-201ENST00000275954 AMELXQ99217 191 aa10.24□□□□□ -0.77
TMEM47-201ENST00000275954 TRBV30A0A0K0K1B3 111 aa10.24□□□□□ -0.77
TMEM47-201ENST00000275954 LINC00959A0A1B0GUT2 108 aa10.23□□□□□ -0.77
TMEM47-201ENST00000275954 SMIM1B2RUZ4 78 aa10.23□□□□□ -0.77
TMEM47-201ENST00000275954 UBL5Q9BZL1 73 aa10.23□□□□□ -0.77
TMEM47-201ENST00000275954 LYRM9A8MSI8 78 aa10.23□□□□□ -0.77
TMEM47-201ENST00000275954 C11orf72Q8NBR9 251 aa10.23□□□□□ -0.77
TMEM47-201ENST00000275954 SMIM9A6NGZ8 99 aa10.23□□□□□ -0.77
TMEM47-201ENST00000275954 C9orf153Q5TBE3 101 aa10.22□□□□□ -0.77
TMEM47-201ENST00000275954 BEAN1Q3B7T3 259 aa10.22□□□□□ -0.77
TMEM47-201ENST00000275954 DSCR8Q96T75 97 aa10.22□□□□□ -0.77
TMEM47-201ENST00000275954 TMEM126AQ9H061 195 aa10.21□□□□□ -0.77
TMEM47-201ENST00000275954 LINC01546A6NGU7 62 aa10.2□□□□□ -0.78
TMEM47-201ENST00000275954 CLUHP3Q96NS8 147 aa10.2□□□□□ -0.78
TMEM47-201ENST00000275954 SPANXDQ9BXN6 97 aa10.2□□□□□ -0.78
TMEM47-201ENST00000275954 FAM236AA0A1B0GUQ0 79 aa10.2□□□□□ -0.78
TMEM47-201ENST00000275954 FAM236BA0A1B0GV22 79 aa10.2□□□□□ -0.78
TMEM47-201ENST00000275954 KLK9Q2XQG4 91 aa10.2□□□□□ -0.78
TMEM47-201ENST00000275954 IBA57-AS1B1ANH7 110 aa10.19□□□□□ -0.78
TMEM47-201ENST00000275954 FHL2Q14192 279 aa10.19□□□□□ -0.78
TMEM47-201ENST00000275954 C9orf116Q5BN46 136 aaPredicted RBP10.18□□□□□ -0.78
TMEM47-201ENST00000275954 Q8N2B8 174 aa10.18□□□□□ -0.78
TMEM47-201ENST00000275954 C11orf45Q8TAV5 145 aa10.18□□□□□ -0.78
TMEM47-201ENST00000275954 CCL18P55774 89 aa10.18□□□□□ -0.78
TMEM47-201ENST00000275954 NTM-AS1Q6ZSK4 140 aa10.18□□□□□ -0.78
TMEM47-201ENST00000275954 XGP55808 180 aa10.18□□□□□ -0.78
TMEM47-201ENST00000275954 PRR3P79522 188 aaKnown RBP10.18□□□□□ -0.78
TMEM47-201ENST00000275954 M0R2N4 97 aa10.17□□□□□ -0.78
TMEM47-201ENST00000275954 MIFP14174 115 aa10.17□□□□□ -0.78
TMEM47-201ENST00000275954 DEFB131BA0A096LNP1 70 aa10.17□□□□□ -0.78
TMEM47-201ENST00000275954 H7C423 109 aa10.17□□□□□ -0.78
TMEM47-201ENST00000275954 CXCL5P42830 114 aa10.17□□□□□ -0.78
TMEM47-201ENST00000275954 LST1O00453 97 aa10.17□□□□□ -0.78
TMEM47-201ENST00000275954 C6orf99Q4VX62 202 aa10.17□□□□□ -0.78
TMEM47-201ENST00000275954 CR1P17927 2039 aa10.17□□□□□ -0.78
TMEM47-201ENST00000275954 NANOS2P60321 138 aaKnown RBP10.16□□□□□ -0.78
TMEM47-201ENST00000275954 KRTAP1-1Q07627 177 aa10.16□□□□□ -0.78
TMEM47-201ENST00000275954 TIMM17BO60830 172 aa10.16□□□□□ -0.78
TMEM47-201ENST00000275954 SS18L2Q9UHA2 77 aa10.16□□□□□ -0.78
TMEM47-201ENST00000275954 SMIM11BQ8TCY0 68 aa10.15□□□□□ -0.78
TMEM47-201ENST00000275954 RNF183Q96D59 192 aa10.14□□□□□ -0.79
TMEM47-201ENST00000275954 ACYP1P07311 99 aa10.14□□□□□ -0.79
TMEM47-201ENST00000275954 KPRPQ5T749 579 aaPredicted RBP10.14□□□□□ -0.79
TMEM47-201ENST00000275954 CD164L2Q6UWJ8 174 aa10.14□□□□□ -0.79
TMEM47-201ENST00000275954 A0A0J9YWU9 116 aa10.14□□□□□ -0.79
TMEM47-201ENST00000275954 FSHBP01225 129 aa10.14□□□□□ -0.79
TMEM47-201ENST00000275954 ZNF575Q86XF7 245 aa10.14□□□□□ -0.79
TMEM47-201ENST00000275954 SPATA3Q8NHX4 192 aa10.14□□□□□ -0.79
TMEM47-201ENST00000275954 MDFIQ99750 246 aa10.14□□□□□ -0.79
TMEM47-201ENST00000275954 F8WEM9 126 aa10.13□□□□□ -0.79
TMEM47-201ENST00000275954 UBE2BP63146 152 aa10.12□□□□□ -0.79
TMEM47-201ENST00000275954 UNQ6190/PRO20217Q6UXQ8 127 aa10.12□□□□□ -0.79
TMEM47-201ENST00000275954 C16orf95Q9H693 158 aa10.12□□□□□ -0.79
TMEM47-201ENST00000275954 DIRC1Q969H9 104 aa10.11□□□□□ -0.79
TMEM47-201ENST00000275954 ETDCA0A1B0GVM5 59 aa10.1□□□□□ -0.79
TMEM47-201ENST00000275954 FHL3Q13643 280 aa10.1□□□□□ -0.79
TMEM47-201ENST00000275954 PKD1L1Q8TDX9 2849 aa10.1□□□□□ -0.79
TMEM47-201ENST00000275954 IGKV2-24A0A0C4DH68 120 aa10.1□□□□□ -0.79
TMEM47-201ENST00000275954 TRACP01848 142 aa10.1□□□□□ -0.79
TMEM47-201ENST00000275954 SDIM1Q6ZPB5 146 aa10.1□□□□□ -0.79
TMEM47-201ENST00000275954 KIR2DL5BQ8NHK3 375 aa10.1□□□□□ -0.79
TMEM47-201ENST00000275954 RMI2Q96E14 147 aa10.1□□□□□ -0.79
TMEM47-201ENST00000275954 A0A087WZ39 114 aa10.09□□□□□ -0.79
TMEM47-201ENST00000275954 RBM3P98179 157 aaKnown RBP10.09□□□□□ -0.79
TMEM47-201ENST00000275954 CSDC2Q9Y534 153 aaKnown RBP10.09□□□□□ -0.79
TMEM47-201ENST00000275954 A0A1B0GX51 115 aa10.09□□□□□ -0.79
TMEM47-201ENST00000275954 KRTAP10-3P60369 221 aa10.09□□□□□ -0.79
TMEM47-201ENST00000275954 TMEM256-PLSCR3K7ERE1 68 aa10.07□□□□□ -0.8
TMEM47-201ENST00000275954 LELP1Q5T871 98 aa10.07□□□□□ -0.8
TMEM47-201ENST00000275954 SPATA25Q9BR10 227 aa10.07□□□□□ -0.8
TMEM47-201ENST00000275954 TENM1Q9UKZ4 2725 aa10.07□□□□□ -0.8
TMEM47-201ENST00000275954 SMCPP49901 116 aaPredicted RBP10.07□□□□□ -0.8
TMEM47-201ENST00000275954 hADV29S1A0JD25 119 aa10.07□□□□□ -0.8
TMEM47-201ENST00000275954 LINC00643Q86TS7 51 aa10.07□□□□□ -0.8
TMEM47-201ENST00000275954 JMJD7-PLA2G4BH0Y9G9 81 aa10.07□□□□□ -0.8
TMEM47-201ENST00000275954 NDUFV3P56181 108 aaKnown RBP10.06□□□□□ -0.8
TMEM47-201ENST00000275954 C6orf223Q8N319 242 aa10.06□□□□□ -0.8
TMEM47-201ENST00000275954 Q6ZTC4 211 aa10.06□□□□□ -0.8
TMEM47-201ENST00000275954 PDZD2O15018 2839 aa10.05□□□□□ -0.8
TMEM47-201ENST00000275954 COX7BP24311 80 aa10.04□□□□□ -0.8
TMEM47-201ENST00000275954 Q6ZQY7 126 aa10.04□□□□□ -0.8
TMEM47-201ENST00000275954 Q8IZM0 81 aa10.04□□□□□ -0.8
TMEM47-201ENST00000275954 Q8N3U1 123 aa10.04□□□□□ -0.8
TMEM47-201ENST00000275954 CELA1Q9UNI1 258 aa10.04□□□□□ -0.8
TMEM47-201ENST00000275954 IGKV2-28A0A075B6P5 120 aa10.04□□□□□ -0.8
TMEM47-201ENST00000275954 IGKV2D-28P01615 120 aa10.04□□□□□ -0.8
TMEM47-201ENST00000275954 LINC00337Q8N6G1 96 aa10.03□□□□□ -0.8
TMEM47-201ENST00000275954 IGHV3OR16-9A0A0B4J2B5 98 aa10.03□□□□□ -0.8
TMEM47-201ENST00000275954 A8MTW9 85 aa10.03□□□□□ -0.8
TMEM47-201ENST00000275954 SCXQ7RTU7 201 aa10.02□□□□□ -0.8
TMEM47-201ENST00000275954 TRAV23DV6A0A075B6W5 121 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms