RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 SONP18583 2426 aaKnown RBP11.12□□□□□ -0.63
CTDSP1-201ENST00000273062 CHD6Q8TD26 2715 aa11.12□□□□□ -0.63
CTDSP1-201ENST00000273062 CCDC168Q8NDH2 2452 aa11.11□□□□□ -0.63
CTDSP1-201ENST00000273062 DEFB113Q30KQ7 82 aa11.11□□□□□ -0.63
CTDSP1-201ENST00000273062 OVOL2Q9BRP0 275 aa11.11□□□□□ -0.63
CTDSP1-201ENST00000273062 Q96MF0 132 aa11.1□□□□□ -0.63
CTDSP1-201ENST00000273062 ATP5EP2Q5VTU8 51 aa11.1□□□□□ -0.63
CTDSP1-201ENST00000273062 ITPR3Q14573 2671 aa11.1□□□□□ -0.63
CTDSP1-201ENST00000273062 PF4P02776 101 aa11.09□□□□□ -0.63
CTDSP1-201ENST00000273062 DGAT2L7PQ6IED9 249 aa11.09□□□□□ -0.63
CTDSP1-201ENST00000273062 ORMDL1Q9P0S3 153 aa11.09□□□□□ -0.63
CTDSP1-201ENST00000273062 MYO9AB2RTY4 2548 aa11.09□□□□□ -0.63
CTDSP1-201ENST00000273062 C2CD3Q4AC94 2353 aa11.09□□□□□ -0.63
CTDSP1-201ENST00000273062 FSHBP01225 129 aa11.08□□□□□ -0.64
CTDSP1-201ENST00000273062 KRTAP1-3Q8IUG1 177 aa11.08□□□□□ -0.64
CTDSP1-201ENST00000273062 AKAP9Q99996 3911 aa11.07□□□□□ -0.64
CTDSP1-201ENST00000273062 Q6YL49 198 aa11.07□□□□□ -0.64
CTDSP1-201ENST00000273062 ZNF702PQ9H963 129 aa11.07□□□□□ -0.64
CTDSP1-201ENST00000273062 H0YGX0 51 aa11.07□□□□□ -0.64
CTDSP1-201ENST00000273062 S100A7L2Q5SY68 101 aa11.07□□□□□ -0.64
CTDSP1-201ENST00000273062 C18orf65Q6ZTR6 163 aa11.07□□□□□ -0.64
CTDSP1-201ENST00000273062 M0R2N4 97 aa11.05□□□□□ -0.64
CTDSP1-201ENST00000273062 CCL18P55774 89 aa11.05□□□□□ -0.64
CTDSP1-201ENST00000273062 DEFB136Q30KP8 78 aa11.05□□□□□ -0.64
CTDSP1-201ENST00000273062 TM2D3Q9BRN9 247 aa11.05□□□□□ -0.64
CTDSP1-201ENST00000273062 UBL5Q9BZL1 73 aa11.05□□□□□ -0.64
CTDSP1-201ENST00000273062 FLNAP21333 2647 aaKnown RBP11.04□□□□□ -0.64
CTDSP1-201ENST00000273062 RNASE1P07998 156 aaKnown RBP11.04□□□□□ -0.64
CTDSP1-201ENST00000273062 TRBV10-3A0A0K0K1G6 114 aa11.03□□□□□ -0.64
CTDSP1-201ENST00000273062 SNRPD3P62318 126 aaKnown RBP11.03□□□□□ -0.64
CTDSP1-201ENST00000273062 K7EMT4 169 aa11.02□□□□□ -0.65
CTDSP1-201ENST00000273062 LINC00158P58513 81 aa11.02□□□□□ -0.65
CTDSP1-201ENST00000273062 TOMM7Q9P0U1 55 aa11.02□□□□□ -0.65
CTDSP1-201ENST00000273062 NF1P21359 2839 aa11.02□□□□□ -0.65
CTDSP1-201ENST00000273062 ACANP16112 2415 aa11□□□□□ -0.65
CTDSP1-201ENST00000273062 LINC01547P58512 204 aaPredicted RBP11□□□□□ -0.65
CTDSP1-201ENST00000273062 A0A087WZ39 114 aa11□□□□□ -0.65
CTDSP1-201ENST00000273062 SLURP1P55000 103 aa11□□□□□ -0.65
CTDSP1-201ENST00000273062 HAMPP81172 84 aa11□□□□□ -0.65
CTDSP1-201ENST00000273062 TRBV7-4A0A0J9YYF1 115 aa10.99□□□□□ -0.65
CTDSP1-201ENST00000273062 PAX4O43316 350 aa10.99□□□□□ -0.65
CTDSP1-201ENST00000273062 C11orf68Q9H3H3 251 aaKnown RBP10.98□□□□□ -0.65
CTDSP1-201ENST00000273062 HELZ2Q9BYK8 2649 aaKnown RBP10.98□□□□□ -0.65
CTDSP1-201ENST00000273062 JMJD7-PLA2G4BH0Y9G9 81 aa10.98□□□□□ -0.65
CTDSP1-201ENST00000273062 ITPR2Q14571 2701 aa10.97□□□□□ -0.65
CTDSP1-201ENST00000273062 K7EQG2 157 aa10.97□□□□□ -0.65
CTDSP1-201ENST00000273062 MIFP14174 115 aa10.97□□□□□ -0.65
CTDSP1-201ENST00000273062 SETD2Q9BYW2 2564 aaPredicted RBP10.97□□□□□ -0.65
CTDSP1-201ENST00000273062 A0A1W2PRX2 142 aa10.97□□□□□ -0.65
CTDSP1-201ENST00000273062 TMEM89A2RUT3 159 aa10.97□□□□□ -0.65
CTDSP1-201ENST00000273062 PMAIP1Q13794 54 aa10.97□□□□□ -0.65
CTDSP1-201ENST00000273062 UBE2E2Q96LR5 201 aa10.97□□□□□ -0.65
CTDSP1-201ENST00000273062 PDZD2O15018 2839 aa10.96□□□□□ -0.65
CTDSP1-201ENST00000273062 Q8N3U1 123 aa10.96□□□□□ -0.65
CTDSP1-201ENST00000273062 KHDC1LQ5JSQ8 128 aa10.96□□□□□ -0.66
CTDSP1-201ENST00000273062 SCXQ7RTU7 201 aa10.96□□□□□ -0.66
CTDSP1-201ENST00000273062 PRR3P79522 188 aaKnown RBP10.95□□□□□ -0.66
CTDSP1-201ENST00000273062 FAM19A3Q7Z5A8 133 aa10.95□□□□□ -0.66
CTDSP1-201ENST00000273062 Q8N814 137 aa10.95□□□□□ -0.66
CTDSP1-201ENST00000273062 COX7B2Q8TF08 81 aa10.95□□□□□ -0.66
CTDSP1-201ENST00000273062 LINC00167Q96N53 147 aa10.94□□□□□ -0.66
CTDSP1-201ENST00000273062 MTORP42345 2549 aa10.94□□□□□ -0.66
CTDSP1-201ENST00000273062 BCE1O60756 84 aa10.94□□□□□ -0.66
CTDSP1-201ENST00000273062 Q6ZVQ6 151 aa10.94□□□□□ -0.66
CTDSP1-201ENST00000273062 C11orf44Q8N8P7 122 aa10.94□□□□□ -0.66
CTDSP1-201ENST00000273062 NTM-AS1Q6ZSK4 140 aa10.93□□□□□ -0.66
CTDSP1-201ENST00000273062 IGKV3OR2-268A0A0C4DH90 116 aa10.93□□□□□ -0.66
CTDSP1-201ENST00000273062 IGHV3-53P01767 116 aa10.93□□□□□ -0.66
CTDSP1-201ENST00000273062 CDC42SE2Q9NRR3 84 aa10.93□□□□□ -0.66
CTDSP1-201ENST00000273062 Q6ZQT0 140 aa10.92□□□□□ -0.66
CTDSP1-201ENST00000273062 NANOS2P60321 138 aaKnown RBP10.92□□□□□ -0.66
CTDSP1-201ENST00000273062 SPATA3Q8NHX4 192 aa10.92□□□□□ -0.66
CTDSP1-201ENST00000273062 TRBV6-4A0A1B0GX49 114 aa10.91□□□□□ -0.66
CTDSP1-201ENST00000273062 IBA57-AS1B1ANH7 110 aa10.91□□□□□ -0.66
CTDSP1-201ENST00000273062 TMEM256-PLSCR3K7ERE1 68 aa10.91□□□□□ -0.66
CTDSP1-201ENST00000273062 LY6G6DO95868 133 aa10.91□□□□□ -0.66
CTDSP1-201ENST00000273062 TMEM254Q8TBM7 123 aa10.91□□□□□ -0.66
CTDSP1-201ENST00000273062 KMT2BQ9UMN6 2715 aaPredicted RBP10.91□□□□□ -0.66
CTDSP1-201ENST00000273062 NDUFC1O43677 76 aa10.9□□□□□ -0.66
CTDSP1-201ENST00000273062 ESM1Q9NQ30 184 aa10.9□□□□□ -0.66
CTDSP1-201ENST00000273062 DNAJC9-AS1A6NH13 148 aa10.9□□□□□ -0.66
CTDSP1-201ENST00000273062 NIPBLQ6KC79 2804 aaeCLIP10.9□□□□□ -0.66
CTDSP1-201ENST00000273062 LRCOL1A6NCL2 159 aa10.89□□□□□ -0.67
CTDSP1-201ENST00000273062 ESRGQ1W209 222 aa10.89□□□□□ -0.67
CTDSP1-201ENST00000273062 RETNQ9HD89 108 aa10.89□□□□□ -0.67
CTDSP1-201ENST00000273062 UNC79Q9P2D8 2635 aa10.89□□□□□ -0.67
CTDSP1-201ENST00000273062 WNK1Q9H4A3 2382 aa10.89□□□□□ -0.67
CTDSP1-201ENST00000273062 ATP5EP56381 51 aaPredicted RBP10.89□□□□□ -0.67
CTDSP1-201ENST00000273062 TRBV10-1A0A0K0K1A3 114 aa10.88□□□□□ -0.67
CTDSP1-201ENST00000273062 PLA2G2AP14555 144 aa10.88□□□□□ -0.67
CTDSP1-201ENST00000273062 NREPQ16612 68 aa10.88□□□□□ -0.67
CTDSP1-201ENST00000273062 PRR15Q8IV56 129 aa10.88□□□□□ -0.67
CTDSP1-201ENST00000273062 DEFB131AP59861 70 aa10.88□□□□□ -0.67
CTDSP1-201ENST00000273062 C6orf226Q5I0X4 101 aa10.87□□□□□ -0.67
CTDSP1-201ENST00000273062 ANK3Q12955 4377 aaKnown RBP10.87□□□□□ -0.67
CTDSP1-201ENST00000273062 FASNP49327 2511 aaKnown RBP10.87□□□□□ -0.67
CTDSP1-201ENST00000273062 PLAC8L1A1L4L8 177 aa10.87□□□□□ -0.67
CTDSP1-201ENST00000273062 KRTAP1-1Q07627 177 aa10.87□□□□□ -0.67
CTDSP1-201ENST00000273062 C4orf3Q8WVX3 66 aa10.87□□□□□ -0.67
CTDSP1-201ENST00000273062 K7EQD1 137 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms