RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 DEFB114Q30KQ6 69 aa11.56□□□□□ -0.56
UBR3-201ENST00000272793 SPACA4Q8TDM5 124 aa11.56□□□□□ -0.56
UBR3-201ENST00000272793 INAFM1C9JVW0 142 aa11.55□□□□□ -0.56
UBR3-201ENST00000272793 C2orf91Q6ZV80 131 aa11.53□□□□□ -0.56
UBR3-201ENST00000272793 ADORA2A-AS1P86434 159 aa11.52□□□□□ -0.56
UBR3-201ENST00000272793 TLN1Q9Y490 2541 aaKnown RBP11.52□□□□□ -0.57
UBR3-201ENST00000272793 PKD1L2Q7Z442 2459 aa11.52□□□□□ -0.57
UBR3-201ENST00000272793 PRM2P04554 102 aa11.52□□□□□ -0.57
UBR3-201ENST00000272793 Q8IZM0 81 aa11.52□□□□□ -0.57
UBR3-201ENST00000272793 BDP1A6H8Y1 2624 aa11.51□□□□□ -0.57
UBR3-201ENST00000272793 Q8N7P7 452 aa11.51□□□□□ -0.57
UBR3-201ENST00000272793 C1orf134Q5TEV5 83 aa11.51□□□□□ -0.57
UBR3-201ENST00000272793 MBD6Q96DN6 1003 aa11.5□□□□□ -0.57
UBR3-201ENST00000272793 TSHBP01222 138 aa11.49□□□□□ -0.57
UBR3-201ENST00000272793 UNQ6190/PRO20217Q6UXQ8 127 aa11.49□□□□□ -0.57
UBR3-201ENST00000272793 CCDC140Q96MF4 163 aa11.49□□□□□ -0.57
UBR3-201ENST00000272793 CRIP1P50238 77 aa11.49□□□□□ -0.57
UBR3-201ENST00000272793 SMIM29Q86T20 159 aa11.49□□□□□ -0.57
UBR3-201ENST00000272793 U3KQA8 63 aa11.49□□□□□ -0.57
UBR3-201ENST00000272793 NOTCH2Q04721 2471 aa11.47□□□□□ -0.57
UBR3-201ENST00000272793 FSTL3O95633 263 aa11.47□□□□□ -0.57
UBR3-201ENST00000272793 A8MTW9 85 aa11.46□□□□□ -0.57
UBR3-201ENST00000272793 Q6ZSV7 163 aa11.46□□□□□ -0.58
UBR3-201ENST00000272793 ZNF462Q96JM2 2506 aa11.46□□□□□ -0.58
UBR3-201ENST00000272793 K7EQG2 157 aa11.45□□□□□ -0.58
UBR3-201ENST00000272793 LINC00313P59037 77 aa11.45□□□□□ -0.58
UBR3-201ENST00000272793 CSNK1G2-AS1Q8NCQ2 148 aa11.44□□□□□ -0.58
UBR3-201ENST00000272793 SHISA2Q6UWI4 295 aa11.44□□□□□ -0.58
UBR3-201ENST00000272793 TP53AIP1Q9HCN2 124 aa11.44□□□□□ -0.58
UBR3-201ENST00000272793 ANKHD1Q8IWZ3 2542 aaKnown RBP11.44□□□□□ -0.58
UBR3-201ENST00000272793 C9orf129Q5T035 196 aaKnown RBP11.43□□□□□ -0.58
UBR3-201ENST00000272793 COX6A2Q02221 97 aa11.43□□□□□ -0.58
UBR3-201ENST00000272793 IGLV1-47P01700 117 aa11.42□□□□□ -0.58
UBR3-201ENST00000272793 MOBPQ13875 183 aa11.42□□□□□ -0.58
UBR3-201ENST00000272793 MUC7Q8TAX7 377 aa11.42□□□□□ -0.58
UBR3-201ENST00000272793 U3KQK5 164 aa11.41□□□□□ -0.58
UBR3-201ENST00000272793 CDC42SE2Q9NRR3 84 aa11.41□□□□□ -0.58
UBR3-201ENST00000272793 ODF3BA8MYP8 253 aa11.4□□□□□ -0.58
UBR3-201ENST00000272793 GAS8-AS1O95177 125 aa11.4□□□□□ -0.59
UBR3-201ENST00000272793 LINC01600Q96MT4 127 aa11.4□□□□□ -0.59
UBR3-201ENST00000272793 BPTFQ12830 3046 aa11.39□□□□□ -0.59
UBR3-201ENST00000272793 ZFHX2Q9C0A1 2572 aaPredicted RBP11.39□□□□□ -0.59
UBR3-201ENST00000272793 Q6YL49 198 aa11.39□□□□□ -0.59
UBR3-201ENST00000272793 KRTAP27-1Q3LI81 207 aa11.39□□□□□ -0.59
UBR3-201ENST00000272793 C10orf99Q6UWK7 81 aa11.38□□□□□ -0.59
UBR3-201ENST00000272793 MRGPRG-AS1Q2M3A8 158 aa11.37□□□□□ -0.59
UBR3-201ENST00000272793 C11orf1Q9H5F2 150 aa11.37□□□□□ -0.59
UBR3-201ENST00000272793 TRAV22A0A0B4J277 110 aa11.36□□□□□ -0.59
UBR3-201ENST00000272793 P0C879 139 aa11.36□□□□□ -0.59
UBR3-201ENST00000272793 EGFEM1PQ0D2K5 195 aa11.36□□□□□ -0.59
UBR3-201ENST00000272793 C19orf84I3L1E1 186 aa11.35□□□□□ -0.59
UBR3-201ENST00000272793 COX6B2Q6YFQ2 88 aa11.35□□□□□ -0.59
UBR3-201ENST00000272793 LINC00846Q9NV44 126 aa11.34□□□□□ -0.59
UBR3-201ENST00000272793 Q96NJ1 140 aa11.32□□□□□ -0.6
UBR3-201ENST00000272793 ERC2-IT1O76042 136 aa11.32□□□□□ -0.6
UBR3-201ENST00000272793 C18orf65Q6ZTR6 163 aa11.31□□□□□ -0.6
UBR3-201ENST00000272793 EPM2AB3EWF7 344 aa11.3□□□□□ -0.6
UBR3-201ENST00000272793 KIAA0087Q14695 138 aa11.3□□□□□ -0.6
UBR3-201ENST00000272793 C1orf229Q6ZS94 237 aaPredicted RBP11.3□□□□□ -0.6
UBR3-201ENST00000272793 EDN2P20800 178 aa11.29□□□□□ -0.6
UBR3-201ENST00000272793 UQCR11O14957 56 aa11.29□□□□□ -0.6
UBR3-201ENST00000272793 PRR9Q5T870 116 aa11.29□□□□□ -0.6
UBR3-201ENST00000272793 FAM19A4Q96LR4 140 aa11.29□□□□□ -0.6
UBR3-201ENST00000272793 SMCR5Q8TEV8 140 aa11.28□□□□□ -0.6
UBR3-201ENST00000272793 BRI3O95415 125 aa11.28□□□□□ -0.6
UBR3-201ENST00000272793 ZNF295-AS1Q8N0V1 137 aa11.28□□□□□ -0.6
UBR3-201ENST00000272793 TYMSOSQ8TAI1 123 aa11.27□□□□□ -0.6
UBR3-201ENST00000272793 LY6G6DO95868 133 aa11.27□□□□□ -0.61
UBR3-201ENST00000272793 BRWD1-AS2P59051 145 aa11.27□□□□□ -0.61
UBR3-201ENST00000272793 MIR22HGQ0VDD5 57 aa11.26□□□□□ -0.61
UBR3-201ENST00000272793 LINC00242Q5T6M2 205 aa11.26□□□□□ -0.61
UBR3-201ENST00000272793 WISP2O76076 250 aa11.25□□□□□ -0.61
UBR3-201ENST00000272793 CHTF8P0CG12 524 aa11.25□□□□□ -0.61
UBR3-201ENST00000272793 PLA2G2CQ5R387 149 aa11.24□□□□□ -0.61
UBR3-201ENST00000272793 ADAMTSL4-AS1Q5T5F5 129 aa11.24□□□□□ -0.61
UBR3-201ENST00000272793 IGLV4-60A0A075B6I1 120 aa11.24□□□□□ -0.61
UBR3-201ENST00000272793 C11orf21Q9P2W6 132 aa11.24□□□□□ -0.61
UBR3-201ENST00000272793 SMIM1B2RUZ4 78 aa11.24□□□□□ -0.61
UBR3-201ENST00000272793 THSD7BQ9C0I4 1608 aa11.23□□□□□ -0.61
UBR3-201ENST00000272793 PIEZO2Q9H5I5 2752 aa11.23□□□□□ -0.61
UBR3-201ENST00000272793 FAM229AH3BQW9 127 aa11.23□□□□□ -0.61
UBR3-201ENST00000272793 Q6ZPA2 131 aa11.23□□□□□ -0.61
UBR3-201ENST00000272793 ZNF580Q9UK33 172 aa11.22□□□□□ -0.61
UBR3-201ENST00000272793 PLA2G2DQ9UNK4 145 aa11.22□□□□□ -0.61
UBR3-201ENST00000272793 A0A0D9SG42 100 aa11.21□□□□□ -0.61
UBR3-201ENST00000272793 SPTBN4Q9H254 2564 aa11.21□□□□□ -0.61
UBR3-201ENST00000272793 IGLV6-57P01721 117 aa11.21□□□□□ -0.62
UBR3-201ENST00000272793 TSPEAR-AS2P59090 65 aa11.21□□□□□ -0.62
UBR3-201ENST00000272793 C22orf24Q9Y442 160 aa11.2□□□□□ -0.62
UBR3-201ENST00000272793 RPL37AP61513 92 aaKnown RBP11.2□□□□□ -0.62
UBR3-201ENST00000272793 POLR2KP53803 58 aaKnown RBP11.19□□□□□ -0.62
UBR3-201ENST00000272793 POLQO75417 2590 aa11.19□□□□□ -0.62
UBR3-201ENST00000272793 PIP4P1Q86T03 277 aa11.19□□□□□ -0.62
UBR3-201ENST00000272793 IGIPA6NJ69 53 aa11.18□□□□□ -0.62
UBR3-201ENST00000272793 Q8N2B8 174 aa11.18□□□□□ -0.62
UBR3-201ENST00000272793 C8orf17Q9NRJ1 99 aa11.18□□□□□ -0.62
UBR3-201ENST00000272793 LMO4P61968 165 aa11.17□□□□□ -0.62
UBR3-201ENST00000272793 SPATA3Q8NHX4 192 aa11.17□□□□□ -0.62
UBR3-201ENST00000272793 IGFL2Q6UWQ7 119 aa11.17□□□□□ -0.62
UBR3-201ENST00000272793 KTN1-AS1Q86SY8 53 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms