RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 NUPR1O60356 82 aa8.53□□□□□ -1.04
COMMD4-201ENST00000267935 ZNF861PO60384 105 aa8.53□□□□□ -1.04
COMMD4-201ENST00000267935 KRTAP1-4P0C5Y4 121 aa8.53□□□□□ -1.04
COMMD4-201ENST00000267935 CKS1BP61024 79 aa8.53□□□□□ -1.04
COMMD4-201ENST00000267935 Q6ZN92 141 aa8.53□□□□□ -1.04
COMMD4-201ENST00000267935 ATP6V1G1O75348 118 aa8.52□□□□□ -1.05
COMMD4-201ENST00000267935 SCO1O75880 301 aa8.52□□□□□ -1.05
COMMD4-201ENST00000267935 C6orf226Q5I0X4 101 aa8.52□□□□□ -1.05
COMMD4-201ENST00000267935 C2orf82Q6UX34 121 aa8.52□□□□□ -1.05
COMMD4-201ENST00000267935 Q8N8P6 123 aa8.52□□□□□ -1.05
COMMD4-201ENST00000267935 ALKBH7Q9BT30 221 aaPredicted RBP8.52□□□□□ -1.05
COMMD4-201ENST00000267935 IGLV4-3A0A075B6K6 122 aa8.51□□□□□ -1.05
COMMD4-201ENST00000267935 PRSS47A8MTI9 375 aa8.51□□□□□ -1.05
COMMD4-201ENST00000267935 S100A1P23297 94 aa8.51□□□□□ -1.05
COMMD4-201ENST00000267935 VCX2Q9H322 139 aa8.51□□□□□ -1.05
COMMD4-201ENST00000267935 NXT2Q9NPJ8 142 aaKnown RBP8.51□□□□□ -1.05
COMMD4-201ENST00000267935 LPAP08519 4548 aa8.51□□□□□ -1.05
COMMD4-201ENST00000267935 C9orf129Q5T035 196 aaKnown RBP8.5□□□□□ -1.05
COMMD4-201ENST00000267935 KRTAP7-1Q8IUC3 87 aa8.5□□□□□ -1.05
COMMD4-201ENST00000267935 TOMM7Q9P0U1 55 aa8.5□□□□□ -1.05
COMMD4-201ENST00000267935 SEC11AP67812 179 aa8.49□□□□□ -1.05
COMMD4-201ENST00000267935 CYSLTR1Q9Y271 337 aa8.49□□□□□ -1.05
COMMD4-201ENST00000267935 C22orf24Q9Y442 160 aa8.49□□□□□ -1.05
COMMD4-201ENST00000267935 RPL28P46779 137 aaKnown RBP8.48□□□□□ -1.05
COMMD4-201ENST00000267935 COLCA2A8K830 154 aa8.47□□□□□ -1.05
COMMD4-201ENST00000267935 K7EMI3 77 aa8.47□□□□□ -1.05
COMMD4-201ENST00000267935 NPSP0C0P6 89 aa8.47□□□□□ -1.05
COMMD4-201ENST00000267935 G0S2P27469 103 aa8.47□□□□□ -1.05
COMMD4-201ENST00000267935 ORMDL2Q53FV1 153 aa8.47□□□□□ -1.05
COMMD4-201ENST00000267935 PAPPA-AS1Q5QFB9 102 aa8.47□□□□□ -1.05
COMMD4-201ENST00000267935 FA2HQ7L5A8 372 aa8.47□□□□□ -1.05
COMMD4-201ENST00000267935 TSPAN13O95857 204 aa8.46□□□□□ -1.06
COMMD4-201ENST00000267935 TRGC2P03986 189 aa8.46□□□□□ -1.06
COMMD4-201ENST00000267935 C2orf66Q6UXQ4 117 aa8.46□□□□□ -1.06
COMMD4-201ENST00000267935 Q8IZM0 81 aa8.46□□□□□ -1.06
COMMD4-201ENST00000267935 LINC00469Q8N7U9 141 aa8.46□□□□□ -1.06
COMMD4-201ENST00000267935 CRYGAP11844 174 aa8.45□□□□□ -1.06
COMMD4-201ENST00000267935 C18orf32Q8TCD1 76 aa8.45□□□□□ -1.06
COMMD4-201ENST00000267935 AMELXQ99217 191 aa8.45□□□□□ -1.06
COMMD4-201ENST00000267935 TP73-AS1Q9UF72 201 aa8.45□□□□□ -1.06
COMMD4-201ENST00000267935 HERVK_113P63121 156 aa8.44□□□□□ -1.06
COMMD4-201ENST00000267935 TYMSOSQ8TAI1 123 aa8.44□□□□□ -1.06
COMMD4-201ENST00000267935 GEMIN7Q9H840 131 aaKnown RBP8.44□□□□□ -1.06
COMMD4-201ENST00000267935 XAGE1AQ9HD64 81 aa8.44□□□□□ -1.06
COMMD4-201ENST00000267935 F8VRH5 84 aa8.43□□□□□ -1.06
COMMD4-201ENST00000267935 BCE1O60756 84 aa8.43□□□□□ -1.06
COMMD4-201ENST00000267935 CXCL5P42830 114 aa8.43□□□□□ -1.06
COMMD4-201ENST00000267935 RAB5BP61020 215 aa8.43□□□□□ -1.06
COMMD4-201ENST00000267935 MRPL55Q7Z7F7 128 aaKnown RBP8.43□□□□□ -1.06
COMMD4-201ENST00000267935 LINC00614P0C842 121 aa8.42□□□□□ -1.06
COMMD4-201ENST00000267935 FAM19A3Q7Z5A8 133 aa8.42□□□□□ -1.06
COMMD4-201ENST00000267935 ZC2HC1BQ5TFG8 222 aa8.41□□□□□ -1.06
COMMD4-201ENST00000267935 BAGE3Q86Y29 109 aa8.41□□□□□ -1.06
COMMD4-201ENST00000267935 LINC01546A6NGU7 62 aa8.4□□□□□ -1.06
COMMD4-201ENST00000267935 IGIPA6NJ69 53 aa8.4□□□□□ -1.06
COMMD4-201ENST00000267935 LINC00173Q6ZV60 143 aa8.4□□□□□ -1.06
COMMD4-201ENST00000267935 LINC01549A6NIU2 74 aa8.39□□□□□ -1.07
COMMD4-201ENST00000267935 TOMM6Q96B49 74 aa8.39□□□□□ -1.07
COMMD4-201ENST00000267935 URB1-AS1Q96HZ7 61 aa8.39□□□□□ -1.07
COMMD4-201ENST00000267935 SCGB3A1Q96QR1 104 aa8.39□□□□□ -1.07
COMMD4-201ENST00000267935 CDKN2A-AS1Q9UH64 79 aa8.39□□□□□ -1.07
COMMD4-201ENST00000267935 CHCHD1Q96BP2 118 aaKnown RBP8.38□□□□□ -1.07
COMMD4-201ENST00000267935 LINC00167Q96N53 147 aa8.38□□□□□ -1.07
COMMD4-201ENST00000267935 RPL37AP8A6NKH3 93 aa8.37□□□□□ -1.07
COMMD4-201ENST00000267935 HBDP02042 147 aa8.37□□□□□ -1.07
COMMD4-201ENST00000267935 UBE2AP49459 152 aa8.37□□□□□ -1.07
COMMD4-201ENST00000267935 PMCHL1Q16048 86 aa8.37□□□□□ -1.07
COMMD4-201ENST00000267935 ERASQ7Z444 233 aa8.37□□□□□ -1.07
COMMD4-201ENST00000267935 NKAPP1Q8N9T2 125 aa8.37□□□□□ -1.07
COMMD4-201ENST00000267935 TIMM17AQ99595 171 aa8.37□□□□□ -1.07
COMMD4-201ENST00000267935 A0A087X002 238 aa8.36□□□□□ -1.07
COMMD4-201ENST00000267935 HSBP1O75506 76 aa8.36□□□□□ -1.07
COMMD4-201ENST00000267935 PDZD11Q5EBL8 140 aa8.36□□□□□ -1.07
COMMD4-201ENST00000267935 COX7B2Q8TF08 81 aa8.35□□□□□ -1.07
COMMD4-201ENST00000267935 IGKV2D-26A0A0A0MRZ7 120 aa8.34□□□□□ -1.07
COMMD4-201ENST00000267935 GAGE10A6NGK3 116 aa8.34□□□□□ -1.07
COMMD4-201ENST00000267935 SERF1AO75920 110 aa8.34□□□□□ -1.07
COMMD4-201ENST00000267935 FAM229BQ4G0N7 80 aa8.34□□□□□ -1.07
COMMD4-201ENST00000267935 A0A096LNJ9 63 aa8.33□□□□□ -1.08
COMMD4-201ENST00000267935 TINCRA0A1B0GVN0 87 aa8.33□□□□□ -1.08
COMMD4-201ENST00000267935 HIST1H2BKO60814 126 aa8.33□□□□□ -1.08
COMMD4-201ENST00000267935 HIST1H2BJP06899 126 aa8.33□□□□□ -1.08
COMMD4-201ENST00000267935 HIST1H2BOP23527 126 aa8.33□□□□□ -1.08
COMMD4-201ENST00000267935 HIST1H2BBP33778 126 aa8.33□□□□□ -1.08
COMMD4-201ENST00000267935 HIST1H2BDP58876 126 aa8.33□□□□□ -1.08
COMMD4-201ENST00000267935 HIST1H2BCP62807 126 aa8.33□□□□□ -1.08
COMMD4-201ENST00000267935 CTAG1AP78358 180 aa8.33□□□□□ -1.08
COMMD4-201ENST00000267935 HIST2H2BEQ16778 126 aa8.33□□□□□ -1.08
COMMD4-201ENST00000267935 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.33□□□□□ -1.08
COMMD4-201ENST00000267935 HIST1H2BHQ93079 126 aa8.33□□□□□ -1.08
COMMD4-201ENST00000267935 HIST1H2BNQ99877 126 aa8.33□□□□□ -1.08
COMMD4-201ENST00000267935 HIST1H2BMQ99879 126 aa8.33□□□□□ -1.08
COMMD4-201ENST00000267935 CDIP1Q9H305 208 aa8.33□□□□□ -1.08
COMMD4-201ENST00000267935 ATP5LO75964 103 aa8.32□□□□□ -1.08
COMMD4-201ENST00000267935 NDUFA6P56556 154 aa8.32□□□□□ -1.08
COMMD4-201ENST00000267935 FAM19A2Q8N3H0 131 aa8.32□□□□□ -1.08
COMMD4-201ENST00000267935 LINC00304Q8N9R0 145 aa8.32□□□□□ -1.08
COMMD4-201ENST00000267935 MUC2Q02817 5179 aa8.31□□□□□ -1.08
COMMD4-201ENST00000267935 IGLV5-37A0A075B6J1 123 aa8.31□□□□□ -1.08
COMMD4-201ENST00000267935 SMIM1B2RUZ4 78 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms