RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 C2orf82Q6UX34 121 aa5.31□□□□□ -1.56
ERCC8-201ENST00000265038 LINC00474Q9P2X8 69 aa5.31□□□□□ -1.56
ERCC8-201ENST00000265038 RPL37AP61513 92 aaKnown RBP5.3□□□□□ -1.56
ERCC8-201ENST00000265038 CHCHD1Q96BP2 118 aaKnown RBP5.3□□□□□ -1.56
ERCC8-201ENST00000265038 VPS13BQ7Z7G8 4022 aa5.3□□□□□ -1.56
ERCC8-201ENST00000265038 EIF4EBP3O60516 100 aaPredicted RBP5.3□□□□□ -1.56
ERCC8-201ENST00000265038 LINC00469Q8N7U9 141 aa5.3□□□□□ -1.56
ERCC8-201ENST00000265038 A0A1W2PNN7 141 aa5.29□□□□□ -1.56
ERCC8-201ENST00000265038 SMIM1B2RUZ4 78 aa5.29□□□□□ -1.56
ERCC8-201ENST00000265038 SCO1O75880 301 aa5.29□□□□□ -1.56
ERCC8-201ENST00000265038 TLX1NBP0CAT3 122 aa5.29□□□□□ -1.56
ERCC8-201ENST00000265038 RPL18AQ02543 176 aaKnown RBP5.29□□□□□ -1.56
ERCC8-201ENST00000265038 Q6ZRP5 223 aa5.29□□□□□ -1.56
ERCC8-201ENST00000265038 Q8IZM0 81 aa5.29□□□□□ -1.56
ERCC8-201ENST00000265038 TOMM7Q9P0U1 55 aa5.29□□□□□ -1.56
ERCC8-201ENST00000265038 ATP5LO75964 103 aa5.28□□□□□ -1.56
ERCC8-201ENST00000265038 PRSS2P07478 247 aa5.28□□□□□ -1.56
ERCC8-201ENST00000265038 IGLC3P0DOY3 106 aa5.28□□□□□ -1.56
ERCC8-201ENST00000265038 NDUFA6P56556 154 aa5.28□□□□□ -1.56
ERCC8-201ENST00000265038 C6orf226Q5I0X4 101 aa5.28□□□□□ -1.56
ERCC8-201ENST00000265038 PACRGQ96M98 296 aaPredicted RBP5.28□□□□□ -1.56
ERCC8-201ENST00000265038 TRBV30A0A0K0K1B3 111 aa5.28□□□□□ -1.56
ERCC8-201ENST00000265038 HNRNPA3P51991 378 aaKnown RBP5.28□□□□□ -1.56
ERCC8-201ENST00000265038 LINC00310P59036 64 aa5.28□□□□□ -1.56
ERCC8-201ENST00000265038 C9orf116Q5BN46 136 aaPredicted RBP5.28□□□□□ -1.56
ERCC8-201ENST00000265038 BAGE3Q86Y29 109 aa5.28□□□□□ -1.56
ERCC8-201ENST00000265038 SPINK8P0C7L1 97 aa5.27□□□□□ -1.57
ERCC8-201ENST00000265038 CKS1BP61024 79 aa5.27□□□□□ -1.57
ERCC8-201ENST00000265038 FAM19A2Q8N3H0 131 aa5.27□□□□□ -1.57
ERCC8-201ENST00000265038 GAGE2EQ4V326 116 aa5.26□□□□□ -1.57
ERCC8-201ENST00000265038 C7orf33Q8WU49 177 aa5.26□□□□□ -1.57
ERCC8-201ENST00000265038 GAGE2DQ9UEU5 116 aa5.26□□□□□ -1.57
ERCC8-201ENST00000265038 C11orf86A6NJI1 115 aa5.26□□□□□ -1.57
ERCC8-201ENST00000265038 NDUFC2-KCTD14E9PQ53 114 aa5.26□□□□□ -1.57
ERCC8-201ENST00000265038 NUPR1O60356 82 aa5.26□□□□□ -1.57
ERCC8-201ENST00000265038 HSBP1O75506 76 aa5.26□□□□□ -1.57
ERCC8-201ENST00000265038 SERF1AO75920 110 aa5.26□□□□□ -1.57
ERCC8-201ENST00000265038 ZNF22P17026 224 aaPredicted RBP5.26□□□□□ -1.57
ERCC8-201ENST00000265038 COX7B2Q8TF08 81 aa5.26□□□□□ -1.57
ERCC8-201ENST00000265038 IFI27L1Q96BM0 104 aa5.26□□□□□ -1.57
ERCC8-201ENST00000265038 FAM168BA1KXE4 195 aa5.25□□□□□ -1.57
ERCC8-201ENST00000265038 H3BRM9 83 aa5.25□□□□□ -1.57
ERCC8-201ENST00000265038 KRTAP7-1Q8IUC3 87 aa5.25□□□□□ -1.57
ERCC8-201ENST00000265038 TRAV12-1A0A0B4J245 112 aa5.24□□□□□ -1.57
ERCC8-201ENST00000265038 IGLV5-39A0A0G2JS06 123 aa5.24□□□□□ -1.57
ERCC8-201ENST00000265038 F8VRH5 84 aa5.24□□□□□ -1.57
ERCC8-201ENST00000265038 CXCL5P42830 114 aa5.24□□□□□ -1.57
ERCC8-201ENST00000265038 C9orf129Q5T035 196 aaKnown RBP5.24□□□□□ -1.57
ERCC8-201ENST00000265038 CHTOPQ9Y3Y2 248 aaKnown RBP5.24□□□□□ -1.57
ERCC8-201ENST00000265038 PHF5AQ7RTV0 110 aaKnown RBP5.24□□□□□ -1.57
ERCC8-201ENST00000265038 PRR3P79522 188 aaKnown RBP5.23□□□□□ -1.57
ERCC8-201ENST00000265038 KRTAP29-1A8MX34 341 aaPredicted RBP5.23□□□□□ -1.57
ERCC8-201ENST00000265038 ANKRD39Q53RE8 183 aa5.23□□□□□ -1.57
ERCC8-201ENST00000265038 TMEM170BQ5T4T1 132 aa5.23□□□□□ -1.57
ERCC8-201ENST00000265038 LCE2AQ5TA79 106 aaPredicted RBP5.23□□□□□ -1.57
ERCC8-201ENST00000265038 HIST1H2BKO60814 126 aa5.22□□□□□ -1.57
ERCC8-201ENST00000265038 LEPROTL1O95214 131 aa5.22□□□□□ -1.57
ERCC8-201ENST00000265038 HIST1H2BJP06899 126 aa5.22□□□□□ -1.57
ERCC8-201ENST00000265038 HIST1H2BOP23527 126 aa5.22□□□□□ -1.57
ERCC8-201ENST00000265038 HIST1H2BBP33778 126 aa5.22□□□□□ -1.57
ERCC8-201ENST00000265038 HIST1H2BDP58876 126 aa5.22□□□□□ -1.57
ERCC8-201ENST00000265038 HIST1H2BCP62807 126 aa5.22□□□□□ -1.57
ERCC8-201ENST00000265038 HIST2H2BEQ16778 126 aa5.22□□□□□ -1.57
ERCC8-201ENST00000265038 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.22□□□□□ -1.57
ERCC8-201ENST00000265038 FAM19A5Q7Z5A7 132 aaPredicted RBP5.22□□□□□ -1.57
ERCC8-201ENST00000265038 KRTAP11-1Q8IUC1 163 aa5.22□□□□□ -1.57
ERCC8-201ENST00000265038 HIST1H2BHQ93079 126 aa5.22□□□□□ -1.57
ERCC8-201ENST00000265038 HIST1H2BNQ99877 126 aa5.22□□□□□ -1.57
ERCC8-201ENST00000265038 HIST1H2BMQ99879 126 aa5.22□□□□□ -1.57
ERCC8-201ENST00000265038 FLG2Q5D862 2391 aaPredicted RBP5.22□□□□□ -1.57
ERCC8-201ENST00000265038 XAGE1AQ9HD64 81 aa5.21□□□□□ -1.57
ERCC8-201ENST00000265038 SRRM2Q9UQ35 2752 aaKnown RBP5.21□□□□□ -1.58
ERCC8-201ENST00000265038 MYCBP2O75592 4640 aa5.21□□□□□ -1.58
ERCC8-201ENST00000265038 TMEM223A0PJW6 202 aa5.21□□□□□ -1.58
ERCC8-201ENST00000265038 FABP4P15090 132 aa5.21□□□□□ -1.58
ERCC8-201ENST00000265038 ODF1Q14990 250 aa5.21□□□□□ -1.58
ERCC8-201ENST00000265038 H0Y8G0 127 aa5.2□□□□□ -1.58
ERCC8-201ENST00000265038 SERTAD4-AS1Q5TG53 156 aa5.2□□□□□ -1.58
ERCC8-201ENST00000265038 PSORS1C2Q9UIG4 136 aa5.2□□□□□ -1.58
ERCC8-201ENST00000265038 M0QXV9 152 aa5.19□□□□□ -1.58
ERCC8-201ENST00000265038 OXTP01178 125 aa5.19□□□□□ -1.58
ERCC8-201ENST00000265038 SRSF9Q13242 221 aaKnown RBP eCLIP5.19□□□□□ -1.58
ERCC8-201ENST00000265038 HSPB8Q9UJY1 196 aa5.19□□□□□ -1.58
ERCC8-201ENST00000265038 ZNF625Q96I27 306 aaPredicted RBP5.19□□□□□ -1.58
ERCC8-201ENST00000265038 PKHD1L1Q86WI1 4243 aa5.19□□□□□ -1.58
ERCC8-201ENST00000265038 C22orf24Q9Y442 160 aa5.18□□□□□ -1.58
ERCC8-201ENST00000265038 PFN2P35080 140 aa5.18□□□□□ -1.58
ERCC8-201ENST00000265038 SPINK6Q6UWN8 80 aa5.18□□□□□ -1.58
ERCC8-201ENST00000265038 PMCHL2Q9BQD1 86 aa5.18□□□□□ -1.58
ERCC8-201ENST00000265038 ERG28Q9UKR5 140 aa5.18□□□□□ -1.58
ERCC8-201ENST00000265038 LRP1Q07954 4544 aaKnown RBP5.17□□□□□ -1.58
ERCC8-201ENST00000265038 C1orf137Q5JT78 98 aa5.17□□□□□ -1.58
ERCC8-201ENST00000265038 PLA2G2DQ9UNK4 145 aa5.17□□□□□ -1.58
ERCC8-201ENST00000265038 S100A1P23297 94 aa5.16□□□□□ -1.58
ERCC8-201ENST00000265038 UBE2BP63146 152 aa5.16□□□□□ -1.58
ERCC8-201ENST00000265038 MAP1LC3CQ9BXW4 147 aa5.16□□□□□ -1.58
ERCC8-201ENST00000265038 FAT3Q8TDW7 4589 aa5.16□□□□□ -1.58
ERCC8-201ENST00000265038 DPM2O94777 84 aa5.16□□□□□ -1.58
ERCC8-201ENST00000265038 PLNP26678 52 aa5.16□□□□□ -1.58
ERCC8-201ENST00000265038 COX17Q14061 63 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms