RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 SPAG11BQ08648 103 aa15.23■□□□□ 0.03
SMARCB1-201ENST00000263121 CFAP161Q6P656 301 aa15.23■□□□□ 0.03
SMARCB1-201ENST00000263121 CIRBPQ14011 172 aaKnown RBP15.22■□□□□ 0.03
SMARCB1-201ENST00000263121 RMI2Q96E14 147 aa15.22■□□□□ 0.03
SMARCB1-201ENST00000263121 COL5A1-AS1Q5SY13 56 aa15.22■□□□□ 0.03
SMARCB1-201ENST00000263121 C2orf82Q6UX34 121 aa15.22■□□□□ 0.03
SMARCB1-201ENST00000263121 CKS1BP61024 79 aa15.21■□□□□ 0.03
SMARCB1-201ENST00000263121 MEIG1Q5JSS6 88 aa15.21■□□□□ 0.03
SMARCB1-201ENST00000263121 Q6ZVH6 145 aa15.21■□□□□ 0.03
SMARCB1-201ENST00000263121 C15orf56Q8N910 161 aa15.2■□□□□ 0.02
SMARCB1-201ENST00000263121 SMIM13P0DJ93 91 aa15.19■□□□□ 0.02
SMARCB1-201ENST00000263121 PTTG1IPP53801 180 aa15.19■□□□□ 0.02
SMARCB1-201ENST00000263121 VPS13DQ5THJ4 4388 aa15.18■□□□□ 0.02
SMARCB1-201ENST00000263121 C6orf223Q8N319 242 aa15.18■□□□□ 0.02
SMARCB1-201ENST00000263121 A6NDN8 102 aa15.17■□□□□ 0.02
SMARCB1-201ENST00000263121 MUSTN1Q8IVN3 82 aa15.17■□□□□ 0.02
SMARCB1-201ENST00000263121 A0A0U1RRA0 63 aa15.16■□□□□ 0.02
SMARCB1-201ENST00000263121 DAND5Q8N907 189 aa15.16■□□□□ 0.02
SMARCB1-201ENST00000263121 NTN5Q8WTR8 489 aaPredicted RBP15.16■□□□□ 0.02
SMARCB1-201ENST00000263121 LINC00526Q96FQ7 95 aa15.16■□□□□ 0.02
SMARCB1-201ENST00000263121 TTC32Q5I0X7 151 aa15.16■□□□□ 0.02
SMARCB1-201ENST00000263121 ERG28Q9UKR5 140 aa15.16■□□□□ 0.02
SMARCB1-201ENST00000263121 COX11Q9Y6N1 276 aa15.16■□□□□ 0.02
SMARCB1-201ENST00000263121 NBDYA0A0U1RRE5 68 aa15.15■□□□□ 0.02
SMARCB1-201ENST00000263121 GVQW2A0A096LPI5 108 aaPredicted RBP15.14■□□□□ 0.01
SMARCB1-201ENST00000263121 IFITM1P13164 125 aa15.14■□□□□ 0.01
SMARCB1-201ENST00000263121 HIGD2BQ4VC39 106 aa15.14■□□□□ 0.01
SMARCB1-201ENST00000263121 CASC10Q5T4H9 136 aa15.14■□□□□ 0.01
SMARCB1-201ENST00000263121 TENM2Q9NT68 2774 aa15.14■□□□□ 0.01
SMARCB1-201ENST00000263121 TMEM238LA0A1B0GVL6 79 aa15.13■□□□□ 0.01
SMARCB1-201ENST00000263121 A6NJY4 79 aa15.13■□□□□ 0.01
SMARCB1-201ENST00000263121 C10orf25Q5T742 122 aa15.13■□□□□ 0.01
SMARCB1-201ENST00000263121 NHP2Q9NX24 153 aaKnown RBP15.13■□□□□ 0.01
SMARCB1-201ENST00000263121 ZNF561-AS1K7EIQ3 104 aa15.12■□□□□ 0.01
SMARCB1-201ENST00000263121 RPL24P83731 157 aaKnown RBP15.12■□□□□ 0.01
SMARCB1-201ENST00000263121 UNQ6190/PRO20217Q6UXQ8 127 aa15.12■□□□□ 0.01
SMARCB1-201ENST00000263121 TGP01266 2768 aa15.12■□□□□ 0.01
SMARCB1-201ENST00000263121 A0A1B0GWB2 263 aa15.12■□□□□ 0.01
SMARCB1-201ENST00000263121 LINC00158P58513 81 aa15.12■□□□□ 0.01
SMARCB1-201ENST00000263121 LINC00308Q8TCZ7 52 aa15.12■□□□□ 0.01
SMARCB1-201ENST00000263121 EIF4EBP3O60516 100 aaPredicted RBP15.11■□□□□ 0.01
SMARCB1-201ENST00000263121 PFN2P35080 140 aa15.11■□□□□ 0.01
SMARCB1-201ENST00000263121 NPC2P61916 151 aa15.11■□□□□ 0.01
SMARCB1-201ENST00000263121 MIR7-3HGQ8N6C7 128 aa15.11■□□□□ 0.01
SMARCB1-201ENST00000263121 C2orf48Q96LS8 159 aa15.11■□□□□ 0.01
SMARCB1-201ENST00000263121 A4D1N5 150 aa15.1■□□□□ 0.01
SMARCB1-201ENST00000263121 K7ERJ3 54 aa15.09■□□□□ 0.01
SMARCB1-201ENST00000263121 TAX1BP3O14907 124 aa15.09■□□□□ 0.01
SMARCB1-201ENST00000263121 COX17Q14061 63 aa15.09■□□□□ 0.01
SMARCB1-201ENST00000263121 SOSTDC1Q6X4U4 206 aa15.09■□□□□ 0.01
SMARCB1-201ENST00000263121 PPDPFQ9H3Y8 114 aa15.09■□□□□ 0.01
SMARCB1-201ENST00000263121 USP17L23D6RBM5 183 aa15.09■□□□□ 0.01
SMARCB1-201ENST00000263121 F8WDY8 70 aa15.08■□□□□ 0
SMARCB1-201ENST00000263121 C9orf116Q5BN46 136 aaPredicted RBP15.07■□□□□ 0
SMARCB1-201ENST00000263121 COPS9Q8WXC6 57 aa15.07■□□□□ 0
SMARCB1-201ENST00000263121 CAMK2N2Q96S95 79 aa15.07■□□□□ 0
SMARCB1-201ENST00000263121 C3orf84H3BNL1 204 aa15.06■□□□□ 0
SMARCB1-201ENST00000263121 C6orf48Q9UBA6 75 aa15.06■□□□□ 0
SMARCB1-201ENST00000263121 CFC1BP0CG36 223 aa15.06■□□□□ 0
SMARCB1-201ENST00000263121 CFC1P0CG37 223 aa15.06■□□□□ 0
SMARCB1-201ENST00000263121 TRBV30A0A0K0K1B3 111 aa15.05■□□□□ -0
SMARCB1-201ENST00000263121 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.04■□□□□ -0
SMARCB1-201ENST00000263121 Q6ZRU5 148 aa15.04■□□□□ -0
SMARCB1-201ENST00000263121 RAB37Q96AX2 223 aa15.03■□□□□ -0
SMARCB1-201ENST00000263121 A0A0B4J2C4 111 aa15.02□□□□□ -0.01
SMARCB1-201ENST00000263121 A0A1B0GV90 55 aa15.02□□□□□ -0.01
SMARCB1-201ENST00000263121 PSCAO43653 123 aa15.01□□□□□ -0.01
SMARCB1-201ENST00000263121 LECT2O14960 151 aa15□□□□□ -0.01
SMARCB1-201ENST00000263121 SYCNQ0VAF6 134 aa15□□□□□ -0.01
SMARCB1-201ENST00000263121 Q6ZR54 194 aa15□□□□□ -0.01
SMARCB1-201ENST00000263121 Q6ZRN7 208 aaPredicted RBP15□□□□□ -0.01
SMARCB1-201ENST00000263121 DNAH10Q8IVF4 4471 aa15□□□□□ -0.01
SMARCB1-201ENST00000263121 LOC107984156A0A0G2JMH3 177 aa15□□□□□ -0.01
SMARCB1-201ENST00000263121 M0R2N4 97 aa15□□□□□ -0.01
SMARCB1-201ENST00000263121 WFDC2Q14508 124 aa15□□□□□ -0.01
SMARCB1-201ENST00000263121 ARL17AQ8IVW1 177 aa15□□□□□ -0.01
SMARCB1-201ENST00000263121 LINC00476Q8WZB0 136 aa15□□□□□ -0.01
SMARCB1-201ENST00000263121 C9orf118A6NHY6 69 aa14.98□□□□□ -0.01
SMARCB1-201ENST00000263121 SLPIP03973 132 aa14.98□□□□□ -0.01
SMARCB1-201ENST00000263121 SND1-IT1Q9HBX3 110 aa14.97□□□□□ -0.01
SMARCB1-201ENST00000263121 PRO1854Q9UHT4 67 aa14.97□□□□□ -0.01
SMARCB1-201ENST00000263121 LY6G6CO95867 125 aa14.97□□□□□ -0.01
SMARCB1-201ENST00000263121 CARD19Q96LW7 228 aa14.96□□□□□ -0.01
SMARCB1-201ENST00000263121 ALMS1Q8TCU4 4167 aa14.95□□□□□ -0.02
SMARCB1-201ENST00000263121 RNF151Q2KHN1 245 aa14.95□□□□□ -0.02
SMARCB1-201ENST00000263121 H3BUT2 72 aa14.93□□□□□ -0.02
SMARCB1-201ENST00000263121 NAA38Q9BRA0 125 aaKnown RBP14.93□□□□□ -0.02
SMARCB1-201ENST00000263121 PGPEP1Q9NXJ5 209 aa14.93□□□□□ -0.02
SMARCB1-201ENST00000263121 DNAH6Q9C0G6 4158 aa14.93□□□□□ -0.02
SMARCB1-201ENST00000263121 LRCOL1A6NCL2 159 aa14.92□□□□□ -0.02
SMARCB1-201ENST00000263121 NDUFC2-KCTD14E9PQ53 114 aa14.92□□□□□ -0.02
SMARCB1-201ENST00000263121 TSPAN13O95857 204 aa14.92□□□□□ -0.02
SMARCB1-201ENST00000263121 C14orf177Q52M58 125 aa14.9□□□□□ -0.02
SMARCB1-201ENST00000263121 IGKV2-28A0A075B6P5 120 aa14.9□□□□□ -0.02
SMARCB1-201ENST00000263121 IGKV2D-28P01615 120 aa14.9□□□□□ -0.02
SMARCB1-201ENST00000263121 KMT2AQ03164 3969 aa14.9□□□□□ -0.02
SMARCB1-201ENST00000263121 NDUFC2O95298 119 aa14.88□□□□□ -0.03
SMARCB1-201ENST00000263121 TLX1NBP0CAT3 122 aa14.88□□□□□ -0.03
SMARCB1-201ENST00000263121 A0A1W2PPM0 123 aa14.87□□□□□ -0.03
SMARCB1-201ENST00000263121 CNBPP62633 177 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms