RNA–Protein interactions for RNA: ENST00000262717.8

CDH20-201, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDH20, Length 3,882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-201ENST00000262717 LINC00337Q8N6G1 96 aa10.3□□□□□ -0.76
CDH20-201ENST00000262717 SPATA3Q8NHX4 192 aa10.3□□□□□ -0.76
CDH20-201ENST00000262717 VWFP04275 2813 aa10.29□□□□□ -0.76
CDH20-201ENST00000262717 STAB1Q9NY15 2570 aa10.29□□□□□ -0.76
CDH20-201ENST00000262717 IGHV4-28A0A0C4DH34 117 aa10.29□□□□□ -0.76
CDH20-201ENST00000262717 C9orf66Q5T8R8 295 aa10.29□□□□□ -0.76
CDH20-201ENST00000262717 CHCHD10Q8WYQ3 142 aaPredicted RBP10.29□□□□□ -0.76
CDH20-201ENST00000262717 IGLV5-45A0A087WSX0 123 aa10.28□□□□□ -0.76
CDH20-201ENST00000262717 IGKV3D-7A0A0C4DH55 119 aa10.28□□□□□ -0.76
CDH20-201ENST00000262717 APOC4P55056 127 aa10.28□□□□□ -0.76
CDH20-201ENST00000262717 FAM218AQ96MZ4 157 aa10.28□□□□□ -0.76
CDH20-201ENST00000262717 PLAC8L1A1L4L8 177 aa10.28□□□□□ -0.76
CDH20-201ENST00000262717 CSDC2Q9Y534 153 aaKnown RBP10.28□□□□□ -0.76
CDH20-201ENST00000262717 ZNF469Q96JG9 3925 aaPredicted RBP10.28□□□□□ -0.76
CDH20-201ENST00000262717 REG3AQ06141 175 aa10.27□□□□□ -0.76
CDH20-201ENST00000262717 HIVEP1P15822 2718 aa10.27□□□□□ -0.77
CDH20-201ENST00000262717 FAM236AA0A1B0GUQ0 79 aa10.27□□□□□ -0.77
CDH20-201ENST00000262717 FAM236BA0A1B0GV22 79 aa10.27□□□□□ -0.77
CDH20-201ENST00000262717 A0A087WYN8 130 aa10.27□□□□□ -0.77
CDH20-201ENST00000262717 HIST1H4AP62805 103 aaKnown RBP10.27□□□□□ -0.77
CDH20-201ENST00000262717 SBSPONQ8IVN8 264 aa10.27□□□□□ -0.77
CDH20-201ENST00000262717 NDUFV3P56181 108 aaKnown RBP10.26□□□□□ -0.77
CDH20-201ENST00000262717 NBEAL1Q6ZS30 2694 aa10.26□□□□□ -0.77
CDH20-201ENST00000262717 C19orf73Q9NVV2 129 aa10.26□□□□□ -0.77
CDH20-201ENST00000262717 MGAM2Q2M2H8 2515 aa10.25□□□□□ -0.77
CDH20-201ENST00000262717 IGHV3OR16-9A0A0B4J2B5 98 aa10.25□□□□□ -0.77
CDH20-201ENST00000262717 KRTAP1-1Q07627 177 aa10.25□□□□□ -0.77
CDH20-201ENST00000262717 KRTAP10-3P60369 221 aa10.25□□□□□ -0.77
CDH20-201ENST00000262717 LAMTOR3Q9UHA4 124 aa10.25□□□□□ -0.77
CDH20-201ENST00000262717 INAFM2P0DMQ5 153 aa10.24□□□□□ -0.77
CDH20-201ENST00000262717 OVOL2Q9BRP0 275 aa10.24□□□□□ -0.77
CDH20-201ENST00000262717 C16orf95Q9H693 158 aa10.24□□□□□ -0.77
CDH20-201ENST00000262717 CLUHP3Q96NS8 147 aa10.24□□□□□ -0.77
CDH20-201ENST00000262717 SPART-AS1P0CW21 52 aa10.24□□□□□ -0.77
CDH20-201ENST00000262717 SPAG11BQ08648 103 aa10.24□□□□□ -0.77
CDH20-201ENST00000262717 CSNK1G2-AS1Q8NCQ2 148 aa10.24□□□□□ -0.77
CDH20-201ENST00000262717 XAGE1AQ9HD64 81 aa10.24□□□□□ -0.77
CDH20-201ENST00000262717 A0A087WZ39 114 aa10.23□□□□□ -0.77
CDH20-201ENST00000262717 IBA57-AS1B1ANH7 110 aa10.23□□□□□ -0.77
CDH20-201ENST00000262717 HIGD2BQ4VC39 106 aa10.23□□□□□ -0.77
CDH20-201ENST00000262717 OXLD1Q5BKU9 147 aa10.23□□□□□ -0.77
CDH20-201ENST00000262717 RETNQ9HD89 108 aa10.23□□□□□ -0.77
CDH20-201ENST00000262717 CELA1Q9UNI1 258 aa10.23□□□□□ -0.77
CDH20-201ENST00000262717 IL17DQ8TAD2 202 aa10.22□□□□□ -0.77
CDH20-201ENST00000262717 CCDC179H3BU77 68 aa10.22□□□□□ -0.77
CDH20-201ENST00000262717 C6orf223Q8N319 242 aa10.22□□□□□ -0.77
CDH20-201ENST00000262717 MRPL23Q16540 153 aaKnown RBP10.22□□□□□ -0.77
CDH20-201ENST00000262717 RPL18AQ02543 176 aaKnown RBP10.21□□□□□ -0.77
CDH20-201ENST00000262717 TENM1Q9UKZ4 2725 aa10.21□□□□□ -0.78
CDH20-201ENST00000262717 SDIM1Q6ZPB5 146 aa10.2□□□□□ -0.78
CDH20-201ENST00000262717 TRACP01848 142 aa10.2□□□□□ -0.78
CDH20-201ENST00000262717 X6R8D5 127 aa10.2□□□□□ -0.78
CDH20-201ENST00000262717 ORMDL1Q9P0S3 153 aa10.2□□□□□ -0.78
CDH20-201ENST00000262717 IGKV2-28A0A075B6P5 120 aa10.19□□□□□ -0.78
CDH20-201ENST00000262717 ZNF561-AS1K7EIQ3 104 aa10.19□□□□□ -0.78
CDH20-201ENST00000262717 IGKV2D-28P01615 120 aa10.19□□□□□ -0.78
CDH20-201ENST00000262717 UNQ6190/PRO20217Q6UXQ8 127 aa10.19□□□□□ -0.78
CDH20-201ENST00000262717 NSD1Q96L73 2696 aaPredicted RBP10.19□□□□□ -0.78
CDH20-201ENST00000262717 H0YGX0 51 aa10.19□□□□□ -0.78
CDH20-201ENST00000262717 COL6A5A8TX70 2615 aa10.19□□□□□ -0.78
CDH20-201ENST00000262717 C6orf99Q4VX62 202 aa10.18□□□□□ -0.78
CDH20-201ENST00000262717 KIR2DL5BQ8NHK3 375 aa10.18□□□□□ -0.78
CDH20-201ENST00000262717 IGHV4-30-4P0DP06 118 aa10.17□□□□□ -0.78
CDH20-201ENST00000262717 MRAPQ8TCY5 172 aa10.17□□□□□ -0.78
CDH20-201ENST00000262717 LYRM9A8MSI8 78 aa10.17□□□□□ -0.78
CDH20-201ENST00000262717 SHISA2Q6UWI4 295 aa10.17□□□□□ -0.78
CDH20-201ENST00000262717 OTOGQ6ZRI0 2925 aa10.16□□□□□ -0.78
CDH20-201ENST00000262717 PRB2P02812 416 aaPredicted RBP10.16□□□□□ -0.78
CDH20-201ENST00000262717 CD164L2Q6UWJ8 174 aa10.16□□□□□ -0.78
CDH20-201ENST00000262717 IGKV2D-24A0A075B6R9 120 aa10.15□□□□□ -0.78
CDH20-201ENST00000262717 RPL28P46779 137 aaKnown RBP10.15□□□□□ -0.78
CDH20-201ENST00000262717 SMIM9A6NGZ8 99 aa10.15□□□□□ -0.78
CDH20-201ENST00000262717 DEFB121Q5J5C9 76 aa10.14□□□□□ -0.79
CDH20-201ENST00000262717 C9orf153Q5TBE3 101 aa10.14□□□□□ -0.79
CDH20-201ENST00000262717 CAMK2N2Q96S95 79 aa10.13□□□□□ -0.79
CDH20-201ENST00000262717 CITED1Q99966 193 aa10.13□□□□□ -0.79
CDH20-201ENST00000262717 TMEM126AQ9H061 195 aa10.13□□□□□ -0.79
CDH20-201ENST00000262717 ACYP1P07311 99 aa10.12□□□□□ -0.79
CDH20-201ENST00000262717 C10orf25Q5T742 122 aa10.12□□□□□ -0.79
CDH20-201ENST00000262717 Q8IZM0 81 aa10.12□□□□□ -0.79
CDH20-201ENST00000262717 CYSRT1A8MQ03 144 aa10.12□□□□□ -0.79
CDH20-201ENST00000262717 LINC00643Q86TS7 51 aa10.12□□□□□ -0.79
CDH20-201ENST00000262717 HAMPP81172 84 aa10.11□□□□□ -0.79
CDH20-201ENST00000262717 WFDC9Q8NEX5 89 aa10.11□□□□□ -0.79
CDH20-201ENST00000262717 CXCL5P42830 114 aa10.11□□□□□ -0.79
CDH20-201ENST00000262717 C9orf129Q5T035 196 aaKnown RBP10.11□□□□□ -0.79
CDH20-201ENST00000262717 A0A087WVE0 104 aa10.1□□□□□ -0.79
CDH20-201ENST00000262717 M0QXV9 152 aa10.09□□□□□ -0.79
CDH20-201ENST00000262717 SMIM20Q8N5G0 67 aa10.09□□□□□ -0.79
CDH20-201ENST00000262717 PDZD2O15018 2839 aa10.09□□□□□ -0.79
CDH20-201ENST00000262717 MIFP14174 115 aa10.08□□□□□ -0.8
CDH20-201ENST00000262717 A0A1B0GUV1 79 aa10.08□□□□□ -0.8
CDH20-201ENST00000262717 SMCR5Q8TEV8 140 aa10.08□□□□□ -0.8
CDH20-201ENST00000262717 KPRPQ5T749 579 aaPredicted RBP10.08□□□□□ -0.8
CDH20-201ENST00000262717 DEFB105AQ8NG35 78 aa10.08□□□□□ -0.8
CDH20-201ENST00000262717 WFDC10BQ8IUB3 73 aa10.07□□□□□ -0.8
CDH20-201ENST00000262717 Q6ZTC4 211 aa10.07□□□□□ -0.8
CDH20-201ENST00000262717 C1orf43Q9BWL3 253 aa10.06□□□□□ -0.8
CDH20-201ENST00000262717 A0A1B0GX51 115 aa10.06□□□□□ -0.8
CDH20-201ENST00000262717 LELP1Q5T871 98 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms