RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 CEND1Q8N111 149 aa11.16□□□□□ -0.62
HLA-F-216ENST00000259951 NBDYA0A0U1RRE5 68 aa11.15□□□□□ -0.62
HLA-F-216ENST00000259951 GCSHP23434 173 aa11.15□□□□□ -0.62
HLA-F-216ENST00000259951 DNAH7Q8WXX0 4024 aa11.14□□□□□ -0.63
HLA-F-216ENST00000259951 ZNF561-AS1K7EIQ3 104 aa11.14□□□□□ -0.63
HLA-F-216ENST00000259951 SPANXDQ9BXN6 97 aa11.14□□□□□ -0.63
HLA-F-216ENST00000259951 SPANXCQ9NY87 97 aa11.14□□□□□ -0.63
HLA-F-216ENST00000259951 KRTAP1-5Q9BYS1 174 aa11.13□□□□□ -0.63
HLA-F-216ENST00000259951 CSMD3Q7Z407 3707 aa11.13□□□□□ -0.63
HLA-F-216ENST00000259951 CASC10Q5T4H9 136 aa11.13□□□□□ -0.63
HLA-F-216ENST00000259951 COPS9Q8WXC6 57 aa11.13□□□□□ -0.63
HLA-F-216ENST00000259951 LITAFQ99732 161 aa11.13□□□□□ -0.63
HLA-F-216ENST00000259951 TENM2Q9NT68 2774 aa11.12□□□□□ -0.63
HLA-F-216ENST00000259951 F8WDY8 70 aa11.12□□□□□ -0.63
HLA-F-216ENST00000259951 PTTG1IPP53801 180 aa11.12□□□□□ -0.63
HLA-F-216ENST00000259951 C15orf56Q8N910 161 aa11.12□□□□□ -0.63
HLA-F-216ENST00000259951 TMEM238LA0A1B0GVL6 79 aa11.11□□□□□ -0.63
HLA-F-216ENST00000259951 A6NDN8 102 aa11.11□□□□□ -0.63
HLA-F-216ENST00000259951 A6NJY4 79 aa11.11□□□□□ -0.63
HLA-F-216ENST00000259951 IFITM1P13164 125 aa11.11□□□□□ -0.63
HLA-F-216ENST00000259951 C2orf82Q6UX34 121 aa11.11□□□□□ -0.63
HLA-F-216ENST00000259951 NTN5Q8WTR8 489 aaPredicted RBP11.11□□□□□ -0.63
HLA-F-216ENST00000259951 GVQW2A0A096LPI5 108 aaPredicted RBP11.1□□□□□ -0.63
HLA-F-216ENST00000259951 ADAMTSL4-AS1Q5T5F5 129 aa11.1□□□□□ -0.63
HLA-F-216ENST00000259951 C2orf48Q96LS8 159 aa11.1□□□□□ -0.63
HLA-F-216ENST00000259951 ERG28Q9UKR5 140 aa11.1□□□□□ -0.63
HLA-F-216ENST00000259951 SMIM13P0DJ93 91 aa11.09□□□□□ -0.63
HLA-F-216ENST00000259951 RPL24P83731 157 aaKnown RBP11.09□□□□□ -0.63
HLA-F-216ENST00000259951 PSCAO43653 123 aa11.09□□□□□ -0.63
HLA-F-216ENST00000259951 FXYD2P54710 66 aa11.09□□□□□ -0.63
HLA-F-216ENST00000259951 LINC00158P58513 81 aa11.09□□□□□ -0.63
HLA-F-216ENST00000259951 COX17Q14061 63 aa11.09□□□□□ -0.63
HLA-F-216ENST00000259951 HIGD2BQ4VC39 106 aa11.09□□□□□ -0.63
HLA-F-216ENST00000259951 C6orf223Q8N319 242 aa11.08□□□□□ -0.64
HLA-F-216ENST00000259951 CAMK2N2Q96S95 79 aa11.08□□□□□ -0.64
HLA-F-216ENST00000259951 A0A0U1RRA0 63 aa11.07□□□□□ -0.64
HLA-F-216ENST00000259951 USP17L23D6RBM5 183 aa11.07□□□□□ -0.64
HLA-F-216ENST00000259951 UNQ6190/PRO20217Q6UXQ8 127 aa11.07□□□□□ -0.64
HLA-F-216ENST00000259951 MUSTN1Q8IVN3 82 aa11.07□□□□□ -0.64
HLA-F-216ENST00000259951 PFN2P35080 140 aa11.06□□□□□ -0.64
HLA-F-216ENST00000259951 LINC00526Q96FQ7 95 aa11.06□□□□□ -0.64
HLA-F-216ENST00000259951 PPDPFQ9H3Y8 114 aa11.06□□□□□ -0.64
HLA-F-216ENST00000259951 TRBV30A0A0K0K1B3 111 aa11.06□□□□□ -0.64
HLA-F-216ENST00000259951 RYR3Q15413 4870 aa11.05□□□□□ -0.64
HLA-F-216ENST00000259951 LY6G6CO95867 125 aa11.05□□□□□ -0.64
HLA-F-216ENST00000259951 MIR7-3HGQ8N6C7 128 aa11.05□□□□□ -0.64
HLA-F-216ENST00000259951 DAND5Q8N907 189 aa11.05□□□□□ -0.64
HLA-F-216ENST00000259951 LINC00308Q8TCZ7 52 aa11.05□□□□□ -0.64
HLA-F-216ENST00000259951 LINC00476Q8WZB0 136 aa11.04□□□□□ -0.64
HLA-F-216ENST00000259951 NHP2Q9NX24 153 aaKnown RBP11.04□□□□□ -0.64
HLA-F-216ENST00000259951 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.03□□□□□ -0.64
HLA-F-216ENST00000259951 C10orf25Q5T742 122 aa11.03□□□□□ -0.64
HLA-F-216ENST00000259951 SYCNQ0VAF6 134 aa11.02□□□□□ -0.64
HLA-F-216ENST00000259951 C14orf177Q52M58 125 aa11.02□□□□□ -0.64
HLA-F-216ENST00000259951 STARD9Q9P2P6 4700 aa11.02□□□□□ -0.65
HLA-F-216ENST00000259951 A4D1N5 150 aa11.02□□□□□ -0.65
HLA-F-216ENST00000259951 M0R2N4 97 aa11.02□□□□□ -0.65
HLA-F-216ENST00000259951 NPC2P61916 151 aa11.02□□□□□ -0.65
HLA-F-216ENST00000259951 Q6ZR54 194 aa11.02□□□□□ -0.65
HLA-F-216ENST00000259951 C6orf48Q9UBA6 75 aa11.02□□□□□ -0.65
HLA-F-216ENST00000259951 A0A1B0GWB2 263 aa11.01□□□□□ -0.65
HLA-F-216ENST00000259951 Q6ZRU5 148 aa11.01□□□□□ -0.65
HLA-F-216ENST00000259951 C9orf116Q5BN46 136 aaPredicted RBP11□□□□□ -0.65
HLA-F-216ENST00000259951 PLECQ15149 4684 aaKnown RBP10.99□□□□□ -0.65
HLA-F-216ENST00000259951 RNF151Q2KHN1 245 aa10.99□□□□□ -0.65
HLA-F-216ENST00000259951 CARD19Q96LW7 228 aa10.99□□□□□ -0.65
HLA-F-216ENST00000259951 LECT2O14960 151 aa10.98□□□□□ -0.65
HLA-F-216ENST00000259951 TAX1BP3O14907 124 aa10.98□□□□□ -0.65
HLA-F-216ENST00000259951 SOSTDC1Q6X4U4 206 aa10.98□□□□□ -0.65
HLA-F-216ENST00000259951 Q6ZRN7 208 aaPredicted RBP10.98□□□□□ -0.65
HLA-F-216ENST00000259951 A0A0B4J2C4 111 aa10.97□□□□□ -0.65
HLA-F-216ENST00000259951 LOC107984156A0A0G2JMH3 177 aa10.97□□□□□ -0.65
HLA-F-216ENST00000259951 CFC1BP0CG36 223 aa10.97□□□□□ -0.65
HLA-F-216ENST00000259951 CFC1P0CG37 223 aa10.97□□□□□ -0.65
HLA-F-216ENST00000259951 ARL17AQ8IVW1 177 aa10.97□□□□□ -0.65
HLA-F-216ENST00000259951 RAB37Q96AX2 223 aa10.97□□□□□ -0.65
HLA-F-216ENST00000259951 K7ERJ3 54 aa10.96□□□□□ -0.65
HLA-F-216ENST00000259951 EIF4EBP3O60516 100 aaPredicted RBP10.95□□□□□ -0.66
HLA-F-216ENST00000259951 SND1-IT1Q9HBX3 110 aa10.95□□□□□ -0.66
HLA-F-216ENST00000259951 NDUFC2-KCTD14E9PQ53 114 aa10.95□□□□□ -0.66
HLA-F-216ENST00000259951 C1orf134Q5TEV5 83 aa10.95□□□□□ -0.66
HLA-F-216ENST00000259951 PRO1854Q9UHT4 67 aa10.95□□□□□ -0.66
HLA-F-216ENST00000259951 LYSTQ99698 3801 aa10.94□□□□□ -0.66
HLA-F-216ENST00000259951 WFDC2Q14508 124 aa10.94□□□□□ -0.66
HLA-F-216ENST00000259951 LRCOL1A6NCL2 159 aa10.93□□□□□ -0.66
HLA-F-216ENST00000259951 SLPIP03973 132 aa10.92□□□□□ -0.66
HLA-F-216ENST00000259951 TLX1NBP0CAT3 122 aa10.92□□□□□ -0.66
HLA-F-216ENST00000259951 CNBPP62633 177 aaKnown RBP10.92□□□□□ -0.66
HLA-F-216ENST00000259951 C9orf118A6NHY6 69 aa10.91□□□□□ -0.66
HLA-F-216ENST00000259951 VPS13DQ5THJ4 4388 aa10.91□□□□□ -0.66
HLA-F-216ENST00000259951 NDUFC2O95298 119 aa10.91□□□□□ -0.66
HLA-F-216ENST00000259951 SACSQ9NZJ4 4579 aa10.9□□□□□ -0.66
HLA-F-216ENST00000259951 RYR2Q92736 4967 aa10.9□□□□□ -0.66
HLA-F-216ENST00000259951 VAMP3Q15836 100 aa10.9□□□□□ -0.66
HLA-F-216ENST00000259951 DNAH1Q9P2D7 4330 aa10.89□□□□□ -0.67
HLA-F-216ENST00000259951 TRAV13-2A0A0B4J235 113 aa10.89□□□□□ -0.67
HLA-F-216ENST00000259951 UBE2V1Q13404 147 aa10.89□□□□□ -0.67
HLA-F-216ENST00000259951 PGPEP1Q9NXJ5 209 aa10.89□□□□□ -0.67
HLA-F-216ENST00000259951 LOC107984640A0A0U1RRK4 108 aa10.88□□□□□ -0.67
HLA-F-216ENST00000259951 PKIGQ9Y2B9 76 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms