RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 PLAC8L1A1L4L8 177 aa9.47□□□□□ -0.89
VHL-201ENST00000256474 C9orf129Q5T035 196 aaKnown RBP9.47□□□□□ -0.89
VHL-201ENST00000256474 MALP21145 153 aa9.47□□□□□ -0.89
VHL-201ENST00000256474 LINC00269Q8N2A0 174 aa9.47□□□□□ -0.89
VHL-201ENST00000256474 IGKV2-28A0A075B6P5 120 aa9.46□□□□□ -0.89
VHL-201ENST00000256474 IGKV2D-28P01615 120 aa9.46□□□□□ -0.89
VHL-201ENST00000256474 SMCR5Q8TEV8 140 aa9.46□□□□□ -0.89
VHL-201ENST00000256474 TENM1Q9UKZ4 2725 aa9.46□□□□□ -0.89
VHL-201ENST00000256474 TRBV6-4A0A1B0GX49 114 aa9.46□□□□□ -0.89
VHL-201ENST00000256474 SDIM1Q6ZPB5 146 aa9.46□□□□□ -0.9
VHL-201ENST00000256474 LINC00959A0A1B0GUT2 108 aa9.45□□□□□ -0.9
VHL-201ENST00000256474 SVIPQ8NHG7 77 aa9.45□□□□□ -0.9
VHL-201ENST00000256474 IGLV1-51P01701 117 aa9.45□□□□□ -0.9
VHL-201ENST00000256474 SS18Q15532 418 aa9.45□□□□□ -0.9
VHL-201ENST00000256474 FAM222AQ5U5X8 452 aa9.45□□□□□ -0.9
VHL-201ENST00000256474 CSDC2Q9Y534 153 aaKnown RBP9.45□□□□□ -0.9
VHL-201ENST00000256474 TEP1Q99973 2627 aaKnown RBP9.45□□□□□ -0.9
VHL-201ENST00000256474 PKD1L1Q8TDX9 2849 aa9.45□□□□□ -0.9
VHL-201ENST00000256474 IGHV3OR16-9A0A0B4J2B5 98 aa9.44□□□□□ -0.9
VHL-201ENST00000256474 SPATA3Q8NHX4 192 aa9.44□□□□□ -0.9
VHL-201ENST00000256474 IL17DQ8TAD2 202 aa9.44□□□□□ -0.9
VHL-201ENST00000256474 M0QXV9 152 aa9.43□□□□□ -0.9
VHL-201ENST00000256474 LRRC75A-AS1Q8N1F1 130 aa9.43□□□□□ -0.9
VHL-201ENST00000256474 TMEM86BQ8N661 226 aa9.43□□□□□ -0.9
VHL-201ENST00000256474 HIST1H4AP62805 103 aaKnown RBP9.42□□□□□ -0.9
VHL-201ENST00000256474 TRACP01848 142 aa9.42□□□□□ -0.9
VHL-201ENST00000256474 KLK5Q9Y337 293 aaPredicted RBP9.42□□□□□ -0.9
VHL-201ENST00000256474 C19orf73Q9NVV2 129 aa9.41□□□□□ -0.9
VHL-201ENST00000256474 A0A087WVE0 104 aa9.4□□□□□ -0.9
VHL-201ENST00000256474 LOC107984640A0A0U1RRK4 108 aa9.4□□□□□ -0.9
VHL-201ENST00000256474 INAFM2P0DMQ5 153 aa9.4□□□□□ -0.91
VHL-201ENST00000256474 CSNK1G2-AS1Q8NCQ2 148 aa9.4□□□□□ -0.91
VHL-201ENST00000256474 OTOGQ6ZRI0 2925 aa9.39□□□□□ -0.91
VHL-201ENST00000256474 A0A087WZ39 114 aa9.39□□□□□ -0.91
VHL-201ENST00000256474 CMC4P56277 68 aaPredicted RBP9.39□□□□□ -0.91
VHL-201ENST00000256474 S100A7L2Q5SY68 101 aa9.39□□□□□ -0.91
VHL-201ENST00000256474 RPL28P46779 137 aaKnown RBP9.39□□□□□ -0.91
VHL-201ENST00000256474 WFDC9Q8NEX5 89 aa9.39□□□□□ -0.91
VHL-201ENST00000256474 PPDPFQ9H3Y8 114 aa9.39□□□□□ -0.91
VHL-201ENST00000256474 HIVEP1P15822 2718 aa9.38□□□□□ -0.91
VHL-201ENST00000256474 DAD1P61803 113 aa9.38□□□□□ -0.91
VHL-201ENST00000256474 IBA57-AS1B1ANH7 110 aa9.38□□□□□ -0.91
VHL-201ENST00000256474 C6orf223Q8N319 242 aa9.38□□□□□ -0.91
VHL-201ENST00000256474 PRO0255Q9UI72 69 aa9.38□□□□□ -0.91
VHL-201ENST00000256474 LINC00643Q86TS7 51 aa9.37□□□□□ -0.91
VHL-201ENST00000256474 CHCHD10Q8WYQ3 142 aaPredicted RBP9.37□□□□□ -0.91
VHL-201ENST00000256474 OVOL2Q9BRP0 275 aa9.36□□□□□ -0.91
VHL-201ENST00000256474 KLK12Q9UKR0 248 aa9.36□□□□□ -0.91
VHL-201ENST00000256474 FAM240AA0A1B0GVK7 77 aa9.36□□□□□ -0.91
VHL-201ENST00000256474 ACYP1P07311 99 aa9.35□□□□□ -0.91
VHL-201ENST00000256474 CXCL5P42830 114 aa9.35□□□□□ -0.91
VHL-201ENST00000256474 KRTAP10-3P60369 221 aa9.35□□□□□ -0.91
VHL-201ENST00000256474 Q6Q795 121 aa9.35□□□□□ -0.91
VHL-201ENST00000256474 LINC00846Q9NV44 126 aa9.35□□□□□ -0.91
VHL-201ENST00000256474 REG3AQ06141 175 aa9.34□□□□□ -0.91
VHL-201ENST00000256474 C22orf24Q9Y442 160 aa9.34□□□□□ -0.91
VHL-201ENST00000256474 C6orf99Q4VX62 202 aa9.34□□□□□ -0.91
VHL-201ENST00000256474 XAGE1AQ9HD64 81 aa9.34□□□□□ -0.91
VHL-201ENST00000256474 ORMDL1Q9P0S3 153 aa9.34□□□□□ -0.91
VHL-201ENST00000256474 H0YGX0 51 aa9.33□□□□□ -0.92
VHL-201ENST00000256474 RPL18AQ02543 176 aaKnown RBP9.33□□□□□ -0.92
VHL-201ENST00000256474 KRTAP1-1Q07627 177 aa9.33□□□□□ -0.92
VHL-201ENST00000256474 UNQ6190/PRO20217Q6UXQ8 127 aa9.33□□□□□ -0.92
VHL-201ENST00000256474 LAMTOR3Q9UHA4 124 aa9.32□□□□□ -0.92
VHL-201ENST00000256474 INAFM1C9JVW0 142 aa9.32□□□□□ -0.92
VHL-201ENST00000256474 DEFB121Q5J5C9 76 aa9.32□□□□□ -0.92
VHL-201ENST00000256474 CELA1Q9UNI1 258 aa9.32□□□□□ -0.92
VHL-201ENST00000256474 IGHV4-28A0A0C4DH34 117 aa9.32□□□□□ -0.92
VHL-201ENST00000256474 X6R8D5 127 aa9.32□□□□□ -0.92
VHL-201ENST00000256474 HILS1P60008 231 aa9.31□□□□□ -0.92
VHL-201ENST00000256474 C10orf25Q5T742 122 aa9.31□□□□□ -0.92
VHL-201ENST00000256474 FAM19A3Q7Z5A8 133 aa9.31□□□□□ -0.92
VHL-201ENST00000256474 ANK3Q12955 4377 aaKnown RBP9.31□□□□□ -0.92
VHL-201ENST00000256474 A0A1B0GX51 115 aa9.31□□□□□ -0.92
VHL-201ENST00000256474 TRBV7-7A0A0K0K1E9 115 aa9.3□□□□□ -0.92
VHL-201ENST00000256474 SPAG11BQ08648 103 aa9.3□□□□□ -0.92
VHL-201ENST00000256474 C1orf43Q9BWL3 253 aa9.3□□□□□ -0.92
VHL-201ENST00000256474 HIGD2BQ4VC39 106 aa9.3□□□□□ -0.92
VHL-201ENST00000256474 PRB2P02812 416 aaPredicted RBP9.29□□□□□ -0.92
VHL-201ENST00000256474 FAM110AQ9BQ89 295 aa9.29□□□□□ -0.92
VHL-201ENST00000256474 NBEAL1Q6ZS30 2694 aa9.28□□□□□ -0.92
VHL-201ENST00000256474 NOTCH1P46531 2555 aa9.28□□□□□ -0.92
VHL-201ENST00000256474 MGAM2Q2M2H8 2515 aa9.28□□□□□ -0.92
VHL-201ENST00000256474 hADV29S1A0JD25 119 aa9.28□□□□□ -0.92
VHL-201ENST00000256474 LY6G6DO95868 133 aa9.28□□□□□ -0.92
VHL-201ENST00000256474 PKIGQ9Y2B9 76 aa9.27□□□□□ -0.93
VHL-201ENST00000256474 TRAV23DV6A0A075B6W5 121 aa9.27□□□□□ -0.93
VHL-201ENST00000256474 Q8IZM0 81 aa9.27□□□□□ -0.93
VHL-201ENST00000256474 KIR2DL5BQ8NHK3 375 aa9.27□□□□□ -0.93
VHL-201ENST00000256474 LINC01600Q96MT4 127 aa9.27□□□□□ -0.93
VHL-201ENST00000256474 CD164L2Q6UWJ8 174 aa9.26□□□□□ -0.93
VHL-201ENST00000256474 C16orf95Q9H693 158 aa9.26□□□□□ -0.93
VHL-201ENST00000256474 ANK2Q01484 3957 aa9.26□□□□□ -0.93
VHL-201ENST00000256474 J3QKU1 62 aa9.26□□□□□ -0.93
VHL-201ENST00000256474 Q8NDZ9 215 aa9.26□□□□□ -0.93
VHL-201ENST00000256474 TMEM126AQ9H061 195 aa9.26□□□□□ -0.93
VHL-201ENST00000256474 HAMPP81172 84 aa9.25□□□□□ -0.93
VHL-201ENST00000256474 RETNQ9HD89 108 aa9.25□□□□□ -0.93
VHL-201ENST00000256474 CYSRT1A8MQ03 144 aa9.25□□□□□ -0.93
VHL-201ENST00000256474 ENHOQ6UWT2 76 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms