RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 NHLRC4P0CG21 123 aaPredicted RBP12.47□□□□□ -0.41
NDFIP1-201ENST00000253814 C9orf116Q5BN46 136 aaPredicted RBP12.47□□□□□ -0.41
NDFIP1-201ENST00000253814 IGLV5-39A0A0G2JS06 123 aa12.47□□□□□ -0.41
NDFIP1-201ENST00000253814 TMEM256-PLSCR3K7ERE1 68 aa12.46□□□□□ -0.41
NDFIP1-201ENST00000253814 LRRC75A-AS1Q8N1F1 130 aa12.46□□□□□ -0.41
NDFIP1-201ENST00000253814 CHCHD10Q8WYQ3 142 aaPredicted RBP12.46□□□□□ -0.41
NDFIP1-201ENST00000253814 RPL28P46779 137 aaKnown RBP12.46□□□□□ -0.41
NDFIP1-201ENST00000253814 RBM3P98179 157 aaKnown RBP12.46□□□□□ -0.41
NDFIP1-201ENST00000253814 XAGE1AQ9HD64 81 aa12.46□□□□□ -0.41
NDFIP1-201ENST00000253814 USP17L23D6RBM5 183 aa12.46□□□□□ -0.42
NDFIP1-201ENST00000253814 DEFB105AQ8NG35 78 aa12.45□□□□□ -0.42
NDFIP1-201ENST00000253814 SVEP1Q4LDE5 3571 aa12.44□□□□□ -0.42
NDFIP1-201ENST00000253814 COX7CP15954 63 aa12.44□□□□□ -0.42
NDFIP1-201ENST00000253814 REG3AQ06141 175 aa12.44□□□□□ -0.42
NDFIP1-201ENST00000253814 SCXQ7RTU7 201 aa12.44□□□□□ -0.42
NDFIP1-201ENST00000253814 LINC01006Q8NI28 216 aa12.44□□□□□ -0.42
NDFIP1-201ENST00000253814 HECTD1Q9ULT8 2610 aa12.43□□□□□ -0.42
NDFIP1-201ENST00000253814 CSDC2Q9Y534 153 aaKnown RBP12.42□□□□□ -0.42
NDFIP1-201ENST00000253814 LINC00846Q9NV44 126 aa12.42□□□□□ -0.42
NDFIP1-201ENST00000253814 UPK3BQ9BT76 320 aa12.41□□□□□ -0.42
NDFIP1-201ENST00000253814 LOC107984640A0A0U1RRK4 108 aa12.41□□□□□ -0.42
NDFIP1-201ENST00000253814 USP24Q9UPU5 2620 aa12.41□□□□□ -0.42
NDFIP1-201ENST00000253814 CAMK2N2Q96S95 79 aa12.4□□□□□ -0.42
NDFIP1-201ENST00000253814 HIGD2BQ4VC39 106 aa12.4□□□□□ -0.42
NDFIP1-201ENST00000253814 SHISA2Q6UWI4 295 aa12.4□□□□□ -0.42
NDFIP1-201ENST00000253814 TRBV7-7A0A0K0K1E9 115 aa12.39□□□□□ -0.43
NDFIP1-201ENST00000253814 IGLV5-45A0A087WSX0 123 aa12.39□□□□□ -0.43
NDFIP1-201ENST00000253814 A0A087WZ39 114 aa12.39□□□□□ -0.43
NDFIP1-201ENST00000253814 A8MTW9 85 aa12.39□□□□□ -0.43
NDFIP1-201ENST00000253814 APOC4P55056 127 aa12.39□□□□□ -0.43
NDFIP1-201ENST00000253814 IGHV4-28A0A0C4DH34 117 aa12.38□□□□□ -0.43
NDFIP1-201ENST00000253814 SERP2Q8N6R1 65 aa12.37□□□□□ -0.43
NDFIP1-201ENST00000253814 FHL2Q14192 279 aa12.37□□□□□ -0.43
NDFIP1-201ENST00000253814 CRYBG3Q68DQ2 2970 aa12.37□□□□□ -0.43
NDFIP1-201ENST00000253814 Q6ZQY7 126 aa12.37□□□□□ -0.43
NDFIP1-201ENST00000253814 PPDPFQ9H3Y8 114 aa12.37□□□□□ -0.43
NDFIP1-201ENST00000253814 SMCR5Q8TEV8 140 aa12.36□□□□□ -0.43
NDFIP1-201ENST00000253814 ATRQ13535 2644 aa12.36□□□□□ -0.43
NDFIP1-201ENST00000253814 IGKV2D-24A0A075B6R9 120 aa12.36□□□□□ -0.43
NDFIP1-201ENST00000253814 NKAPP1Q8N9T2 125 aa12.35□□□□□ -0.43
NDFIP1-201ENST00000253814 SPART-AS1P0CW21 52 aa12.35□□□□□ -0.43
NDFIP1-201ENST00000253814 SPENQ96T58 3664 aaKnown RBP12.34□□□□□ -0.43
NDFIP1-201ENST00000253814 IGHV3OR16-9A0A0B4J2B5 98 aa12.34□□□□□ -0.43
NDFIP1-201ENST00000253814 HILS1P60008 231 aa12.34□□□□□ -0.43
NDFIP1-201ENST00000253814 DIRC1Q969H9 104 aa12.34□□□□□ -0.43
NDFIP1-201ENST00000253814 IGSF10Q6WRI0 2623 aa12.34□□□□□ -0.43
NDFIP1-201ENST00000253814 UNQ6190/PRO20217Q6UXQ8 127 aa12.34□□□□□ -0.43
NDFIP1-201ENST00000253814 CELSR1Q9NYQ6 3014 aa12.32□□□□□ -0.44
NDFIP1-201ENST00000253814 CD164L2Q6UWJ8 174 aa12.32□□□□□ -0.44
NDFIP1-201ENST00000253814 FAM19A1Q7Z5A9 133 aa12.32□□□□□ -0.44
NDFIP1-201ENST00000253814 IGKV2-28A0A075B6P5 120 aa12.31□□□□□ -0.44
NDFIP1-201ENST00000253814 IGKV2D-28P01615 120 aa12.31□□□□□ -0.44
NDFIP1-201ENST00000253814 Q6JHZ5 121 aa12.31□□□□□ -0.44
NDFIP1-201ENST00000253814 Q8IZM0 81 aa12.31□□□□□ -0.44
NDFIP1-201ENST00000253814 Q8N814 137 aa12.3□□□□□ -0.44
NDFIP1-201ENST00000253814 FLNBO75369 2602 aaKnown RBP12.3□□□□□ -0.44
NDFIP1-201ENST00000253814 DPH3Q96FX2 82 aa12.3□□□□□ -0.44
NDFIP1-201ENST00000253814 SNURFQ9Y675 71 aa12.3□□□□□ -0.44
NDFIP1-201ENST00000253814 C6orf223Q8N319 242 aa12.29□□□□□ -0.44
NDFIP1-201ENST00000253814 FAM104AQ969W3 186 aa12.29□□□□□ -0.44
NDFIP1-201ENST00000253814 FAM110AQ9BQ89 295 aa12.29□□□□□ -0.44
NDFIP1-201ENST00000253814 IGLV1-51P01701 117 aa12.29□□□□□ -0.44
NDFIP1-201ENST00000253814 CCKP06307 115 aa12.29□□□□□ -0.44
NDFIP1-201ENST00000253814 C9orf66Q5T8R8 295 aa12.28□□□□□ -0.44
NDFIP1-201ENST00000253814 C1orf43Q9BWL3 253 aa12.28□□□□□ -0.44
NDFIP1-201ENST00000253814 COX7BP24311 80 aa12.27□□□□□ -0.45
NDFIP1-201ENST00000253814 SMR3AQ99954 134 aa12.27□□□□□ -0.45
NDFIP1-201ENST00000253814 NF1P21359 2839 aa12.26□□□□□ -0.45
NDFIP1-201ENST00000253814 CYSRT1A8MQ03 144 aa12.26□□□□□ -0.45
NDFIP1-201ENST00000253814 ZNF843Q8N446 348 aa12.26□□□□□ -0.45
NDFIP1-201ENST00000253814 NREPQ16612 68 aa12.26□□□□□ -0.45
NDFIP1-201ENST00000253814 PRB2P02812 416 aaPredicted RBP12.25□□□□□ -0.45
NDFIP1-201ENST00000253814 Q8N3U1 123 aa12.25□□□□□ -0.45
NDFIP1-201ENST00000253814 FBN2P35556 2912 aa12.25□□□□□ -0.45
NDFIP1-201ENST00000253814 UTP20O75691 2785 aaKnown RBP12.25□□□□□ -0.45
NDFIP1-201ENST00000253814 FAM19A5Q7Z5A7 132 aaPredicted RBP12.24□□□□□ -0.45
NDFIP1-201ENST00000253814 CUBNO60494 3623 aa12.24□□□□□ -0.45
NDFIP1-201ENST00000253814 DEFB121Q5J5C9 76 aa12.23□□□□□ -0.45
NDFIP1-201ENST00000253814 SVIPQ8NHG7 77 aa12.23□□□□□ -0.45
NDFIP1-201ENST00000253814 TMEM258P61165 79 aa12.23□□□□□ -0.45
NDFIP1-201ENST00000253814 C9orf129Q5T035 196 aaKnown RBP12.23□□□□□ -0.45
NDFIP1-201ENST00000253814 LYRM9A8MSI8 78 aa12.22□□□□□ -0.45
NDFIP1-201ENST00000253814 FAM236DA0A1B0GTK5 79 aa12.2□□□□□ -0.46
NDFIP1-201ENST00000253814 FAM236CP0DP71 79 aa12.2□□□□□ -0.46
NDFIP1-201ENST00000253814 ATP5EP2Q5VTU8 51 aa12.2□□□□□ -0.46
NDFIP1-201ENST00000253814 C3orf84H3BNL1 204 aa12.2□□□□□ -0.46
NDFIP1-201ENST00000253814 TRBV10-3A0A0K0K1G6 114 aa12.19□□□□□ -0.46
NDFIP1-201ENST00000253814 SMIM9A6NGZ8 99 aa12.19□□□□□ -0.46
NDFIP1-201ENST00000253814 KIR2DL5BQ8NHK3 375 aa12.19□□□□□ -0.46
NDFIP1-201ENST00000253814 UNC79Q9P2D8 2635 aa12.18□□□□□ -0.46
NDFIP1-201ENST00000253814 MRAPQ8TCY5 172 aa12.17□□□□□ -0.46
NDFIP1-201ENST00000253814 HRCT1Q6UXD1 115 aa12.17□□□□□ -0.46
NDFIP1-201ENST00000253814 F8WEM9 126 aa12.16□□□□□ -0.46
NDFIP1-201ENST00000253814 UBE2BP63146 152 aa12.16□□□□□ -0.46
NDFIP1-201ENST00000253814 J3QKU1 62 aa12.16□□□□□ -0.46
NDFIP1-201ENST00000253814 ETDCA0A1B0GVM5 59 aa12.15□□□□□ -0.46
NDFIP1-201ENST00000253814 COX17Q14061 63 aa12.15□□□□□ -0.46
NDFIP1-201ENST00000253814 PDE6GP18545 87 aa12.15□□□□□ -0.46
NDFIP1-201ENST00000253814 SETXQ7Z333 2677 aaKnown RBP12.15□□□□□ -0.47
NDFIP1-201ENST00000253814 A0A1B0GUV1 79 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms