RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 PFN2P35080 140 aa14.89□□□□□ -0.03
CLN6-201ENST00000249806 IGLV10-54A0A075B6I4 117 aa14.88□□□□□ -0.03
CLN6-201ENST00000249806 MRPL23Q16540 153 aaKnown RBP14.88□□□□□ -0.03
CLN6-201ENST00000249806 RETNQ9HD89 108 aa14.88□□□□□ -0.03
CLN6-201ENST00000249806 TRBV10-2A0A0K0K1G8 114 aa14.86□□□□□ -0.03
CLN6-201ENST00000249806 SHISA2Q6UWI4 295 aa14.86□□□□□ -0.03
CLN6-201ENST00000249806 IBA57-AS1B1ANH7 110 aa14.86□□□□□ -0.03
CLN6-201ENST00000249806 M0QXV9 152 aa14.86□□□□□ -0.03
CLN6-201ENST00000249806 LST1O00453 97 aa14.86□□□□□ -0.03
CLN6-201ENST00000249806 REG3AQ06141 175 aa14.86□□□□□ -0.03
CLN6-201ENST00000249806 C2orf82Q6UX34 121 aa14.86□□□□□ -0.03
CLN6-201ENST00000249806 SPATA25Q9BR10 227 aa14.85□□□□□ -0.03
CLN6-201ENST00000249806 SND1-IT1Q9HBX3 110 aa14.85□□□□□ -0.03
CLN6-201ENST00000249806 CHCHD10Q8WYQ3 142 aaPredicted RBP14.85□□□□□ -0.03
CLN6-201ENST00000249806 PPDPFQ9H3Y8 114 aa14.85□□□□□ -0.03
CLN6-201ENST00000249806 IGKV2-28A0A075B6P5 120 aa14.84□□□□□ -0.03
CLN6-201ENST00000249806 IGKV2D-28P01615 120 aa14.84□□□□□ -0.03
CLN6-201ENST00000249806 CCL18P55774 89 aa14.84□□□□□ -0.03
CLN6-201ENST00000249806 C3orf56Q8N813 242 aa14.84□□□□□ -0.03
CLN6-201ENST00000249806 NTN5Q8WTR8 489 aaPredicted RBP14.84□□□□□ -0.03
CLN6-201ENST00000249806 MAST4O15021 2626 aa14.83□□□□□ -0.04
CLN6-201ENST00000249806 CD164L2Q6UWJ8 174 aa14.83□□□□□ -0.04
CLN6-201ENST00000249806 Q8IZM0 81 aa14.83□□□□□ -0.04
CLN6-201ENST00000249806 LINC00337Q8N6G1 96 aa14.82□□□□□ -0.04
CLN6-201ENST00000249806 LELP1Q5T871 98 aa14.81□□□□□ -0.04
CLN6-201ENST00000249806 SIGMAR1Q99720 223 aa14.81□□□□□ -0.04
CLN6-201ENST00000249806 COX7A2LO14548 114 aa14.81□□□□□ -0.04
CLN6-201ENST00000249806 LINC01600Q96MT4 127 aa14.8□□□□□ -0.04
CLN6-201ENST00000249806 TEX49A0A1B0GTD5 131 aa14.8□□□□□ -0.04
CLN6-201ENST00000249806 TRAV13-2A0A0B4J235 113 aa14.79□□□□□ -0.04
CLN6-201ENST00000249806 LINC01561Q8N1V8 128 aa14.79□□□□□ -0.04
CLN6-201ENST00000249806 CDIP1Q9H305 208 aa14.79□□□□□ -0.04
CLN6-201ENST00000249806 TENM3Q9P273 2699 aa14.78□□□□□ -0.04
CLN6-201ENST00000249806 CRPP02741 224 aa14.78□□□□□ -0.04
CLN6-201ENST00000249806 EGFEM1PQ0D2K5 195 aa14.78□□□□□ -0.04
CLN6-201ENST00000249806 KIAA0087Q14695 138 aa14.78□□□□□ -0.04
CLN6-201ENST00000249806 CKS1BP61024 79 aa14.77□□□□□ -0.04
CLN6-201ENST00000249806 MALP21145 153 aa14.77□□□□□ -0.05
CLN6-201ENST00000249806 LYPD5Q6UWN5 251 aa14.76□□□□□ -0.05
CLN6-201ENST00000249806 KLK12Q9UKR0 248 aa14.76□□□□□ -0.05
CLN6-201ENST00000249806 H3BT86 120 aa14.75□□□□□ -0.05
CLN6-201ENST00000249806 FAM218AQ96MZ4 157 aa14.74□□□□□ -0.05
CLN6-201ENST00000249806 NOTCH1P46531 2555 aa14.73□□□□□ -0.05
CLN6-201ENST00000249806 Q6ZTC4 211 aa14.73□□□□□ -0.05
CLN6-201ENST00000249806 RPL28P46779 137 aaKnown RBP14.73□□□□□ -0.05
CLN6-201ENST00000249806 CFAP161Q6P656 301 aa14.73□□□□□ -0.05
CLN6-201ENST00000249806 UBE2WQ96B02 151 aa14.72□□□□□ -0.05
CLN6-201ENST00000249806 C9orf116Q5BN46 136 aaPredicted RBP14.72□□□□□ -0.05
CLN6-201ENST00000249806 SMIM11BQ8TCY0 68 aa14.72□□□□□ -0.05
CLN6-201ENST00000249806 COL6A5A8TX70 2615 aa14.72□□□□□ -0.05
CLN6-201ENST00000249806 KPRPQ5T749 579 aaPredicted RBP14.71□□□□□ -0.05
CLN6-201ENST00000249806 PRR34Q9NV39 138 aa14.71□□□□□ -0.05
CLN6-201ENST00000249806 ENHOQ6UWT2 76 aa14.7□□□□□ -0.06
CLN6-201ENST00000249806 TRAV8-4A0A0B4J246 113 aa14.69□□□□□ -0.06
CLN6-201ENST00000249806 LINC00526Q96FQ7 95 aa14.69□□□□□ -0.06
CLN6-201ENST00000249806 DNAH3Q8TD57 4116 aa14.69□□□□□ -0.06
CLN6-201ENST00000249806 C6orf223Q8N319 242 aa14.69□□□□□ -0.06
CLN6-201ENST00000249806 OR13C6PQ8NH95 151 aa14.68□□□□□ -0.06
CLN6-201ENST00000249806 CXCL5P42830 114 aa14.67□□□□□ -0.06
CLN6-201ENST00000249806 XGP55808 180 aa14.67□□□□□ -0.06
CLN6-201ENST00000249806 PRR3P79522 188 aaKnown RBP14.67□□□□□ -0.06
CLN6-201ENST00000249806 WFDC10BQ8IUB3 73 aa14.67□□□□□ -0.06
CLN6-201ENST00000249806 A0A0J9YWU9 116 aa14.66□□□□□ -0.06
CLN6-201ENST00000249806 TRACP01848 142 aa14.66□□□□□ -0.06
CLN6-201ENST00000249806 CYSRT1A8MQ03 144 aa14.65□□□□□ -0.06
CLN6-201ENST00000249806 MT-ATP8P03928 68 aa14.65□□□□□ -0.06
CLN6-201ENST00000249806 C10orf25Q5T742 122 aa14.65□□□□□ -0.06
CLN6-201ENST00000249806 COX17Q14061 63 aa14.65□□□□□ -0.06
CLN6-201ENST00000249806 KLK5Q9Y337 293 aaPredicted RBP14.65□□□□□ -0.06
CLN6-201ENST00000249806 H3BNG1 76 aa14.64□□□□□ -0.07
CLN6-201ENST00000249806 NANOS2P60321 138 aaKnown RBP14.64□□□□□ -0.07
CLN6-201ENST00000249806 UNQ6190/PRO20217Q6UXQ8 127 aa14.64□□□□□ -0.07
CLN6-201ENST00000249806 Q9HAA7 133 aa14.64□□□□□ -0.07
CLN6-201ENST00000249806 SPAG11BQ08648 103 aa14.64□□□□□ -0.07
CLN6-201ENST00000249806 BAALC-AS2P0C853 105 aa14.62□□□□□ -0.07
CLN6-201ENST00000249806 A0A087WYN8 130 aa14.62□□□□□ -0.07
CLN6-201ENST00000249806 BAHCC1Q9P281 2608 aa14.62□□□□□ -0.07
CLN6-201ENST00000249806 PRB2P02812 416 aaPredicted RBP14.61□□□□□ -0.07
CLN6-201ENST00000249806 NBEAL1Q6ZS30 2694 aa14.6□□□□□ -0.07
CLN6-201ENST00000249806 ESRGQ1W209 222 aa14.6□□□□□ -0.07
CLN6-201ENST00000249806 C22orf24Q9Y442 160 aa14.59□□□□□ -0.07
CLN6-201ENST00000249806 Q8NDZ9 215 aa14.58□□□□□ -0.07
CLN6-201ENST00000249806 C11orf45Q8TAV5 145 aa14.58□□□□□ -0.07
CLN6-201ENST00000249806 DEFB131BA0A096LNP1 70 aa14.58□□□□□ -0.08
CLN6-201ENST00000249806 SCGB1A1P11684 91 aa14.58□□□□□ -0.08
CLN6-201ENST00000249806 DEFB121Q5J5C9 76 aa14.58□□□□□ -0.08
CLN6-201ENST00000249806 H0YGX0 51 aa14.57□□□□□ -0.08
CLN6-201ENST00000249806 NDUFC2O95298 119 aa14.55□□□□□ -0.08
CLN6-201ENST00000249806 LECT2O14960 151 aa14.53□□□□□ -0.08
CLN6-201ENST00000249806 NCR3O14931 201 aa14.53□□□□□ -0.08
CLN6-201ENST00000249806 DNAL4O96015 105 aa14.53□□□□□ -0.08
CLN6-201ENST00000249806 KRTAP26-1Q6PEX3 210 aa14.51□□□□□ -0.09
CLN6-201ENST00000249806 TMEM126AQ9H061 195 aa14.5□□□□□ -0.09
CLN6-201ENST00000249806 C6orf48Q9UBA6 75 aa14.5□□□□□ -0.09
CLN6-201ENST00000249806 HIGD2BQ4VC39 106 aa14.5□□□□□ -0.09
CLN6-201ENST00000249806 SLPIP03973 132 aa14.49□□□□□ -0.09
CLN6-201ENST00000249806 C15orf53Q8NAA6 179 aa14.48□□□□□ -0.09
CLN6-201ENST00000249806 MRAPQ8TCY5 172 aa14.47□□□□□ -0.09
CLN6-201ENST00000249806 GVQW2A0A096LPI5 108 aaPredicted RBP14.46□□□□□ -0.09
CLN6-201ENST00000249806 C9orf129Q5T035 196 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms