RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 PMCHL1Q16048 86 aa15.31■□□□□ 0.04
SDF2L1-201ENST00000248958 CXCL5P42830 114 aa15.3■□□□□ 0.04
SDF2L1-201ENST00000248958 C2orf82Q6UX34 121 aa15.3■□□□□ 0.04
SDF2L1-201ENST00000248958 TRGC2P03986 189 aa15.29■□□□□ 0.04
SDF2L1-201ENST00000248958 NDUFA6P56556 154 aa15.28■□□□□ 0.04
SDF2L1-201ENST00000248958 SMIM1B2RUZ4 78 aa15.27■□□□□ 0.04
SDF2L1-201ENST00000248958 H3BRM9 83 aa15.27■□□□□ 0.04
SDF2L1-201ENST00000248958 IGLC3P0DOY3 106 aa15.27■□□□□ 0.04
SDF2L1-201ENST00000248958 Q6ZRP5 223 aa15.27■□□□□ 0.04
SDF2L1-201ENST00000248958 BAGE3Q86Y29 109 aa15.26■□□□□ 0.03
SDF2L1-201ENST00000248958 NDUFC2-KCTD14E9PQ53 114 aa15.25■□□□□ 0.03
SDF2L1-201ENST00000248958 C9orf116Q5BN46 136 aaPredicted RBP15.25■□□□□ 0.03
SDF2L1-201ENST00000248958 A0A1W2PNN7 141 aa15.24■□□□□ 0.03
SDF2L1-201ENST00000248958 COLCA2A8K830 154 aa15.24■□□□□ 0.03
SDF2L1-201ENST00000248958 F8VRH5 84 aa15.24■□□□□ 0.03
SDF2L1-201ENST00000248958 HSBP1O75506 76 aa15.24■□□□□ 0.03
SDF2L1-201ENST00000248958 COX7B2Q8TF08 81 aa15.24■□□□□ 0.03
SDF2L1-201ENST00000248958 DMBT1Q9UGM3 2413 aaPredicted RBP15.23■□□□□ 0.03
SDF2L1-201ENST00000248958 FLG2Q5D862 2391 aaPredicted RBP15.22■□□□□ 0.03
SDF2L1-201ENST00000248958 GAGE2EQ4V326 116 aa15.22■□□□□ 0.03
SDF2L1-201ENST00000248958 GAGE2DQ9UEU5 116 aa15.22■□□□□ 0.03
SDF2L1-201ENST00000248958 MYCBP2O75592 4640 aa15.2■□□□□ 0.02
SDF2L1-201ENST00000248958 KRTAP29-1A8MX34 341 aaPredicted RBP15.2■□□□□ 0.02
SDF2L1-201ENST00000248958 SPINK8P0C7L1 97 aa15.2■□□□□ 0.02
SDF2L1-201ENST00000248958 IFI27L1Q96BM0 104 aa15.2■□□□□ 0.02
SDF2L1-201ENST00000248958 PRR3P79522 188 aaKnown RBP15.19■□□□□ 0.02
SDF2L1-201ENST00000248958 TRAV12-1A0A0B4J245 112 aa15.18■□□□□ 0.02
SDF2L1-201ENST00000248958 ZNF22P17026 224 aaPredicted RBP15.18■□□□□ 0.02
SDF2L1-201ENST00000248958 HNRNPA3P51991 378 aaKnown RBP15.18■□□□□ 0.02
SDF2L1-201ENST00000248958 OXTP01178 125 aa15.17■□□□□ 0.02
SDF2L1-201ENST00000248958 CHTOPQ9Y3Y2 248 aaKnown RBP15.17■□□□□ 0.02
SDF2L1-201ENST00000248958 IGLV5-39A0A0G2JS06 123 aa15.15■□□□□ 0.02
SDF2L1-201ENST00000248958 J3QL48 77 aa15.15■□□□□ 0.02
SDF2L1-201ENST00000248958 FAM19A2Q8N3H0 131 aa15.15■□□□□ 0.02
SDF2L1-201ENST00000248958 C11orf86A6NJI1 115 aa15.14■□□□□ 0.01
SDF2L1-201ENST00000248958 SERF1AO75920 110 aa15.13■□□□□ 0.01
SDF2L1-201ENST00000248958 TMEM170BQ5T4T1 132 aa15.13■□□□□ 0.01
SDF2L1-201ENST00000248958 FAM168BA1KXE4 195 aa15.12■□□□□ 0.01
SDF2L1-201ENST00000248958 C9orf129Q5T035 196 aaKnown RBP15.12■□□□□ 0.01
SDF2L1-201ENST00000248958 PHF5AQ7RTV0 110 aaKnown RBP15.12■□□□□ 0.01
SDF2L1-201ENST00000248958 LEPROTL1O95214 131 aa15.11■□□□□ 0.01
SDF2L1-201ENST00000248958 FAM19A5Q7Z5A7 132 aaPredicted RBP15.11■□□□□ 0.01
SDF2L1-201ENST00000248958 LINC00310P59036 64 aa15.1■□□□□ 0.01
SDF2L1-201ENST00000248958 SFTA2Q6UW10 78 aa15.1■□□□□ 0.01
SDF2L1-201ENST00000248958 SCO1O75880 301 aa15.09■□□□□ 0.01
SDF2L1-201ENST00000248958 M0QXV9 152 aa15.07■□□□□ 0
SDF2L1-201ENST00000248958 ODF1Q14990 250 aa15.07■□□□□ 0
SDF2L1-201ENST00000248958 HSPB8Q9UJY1 196 aa15.07■□□□□ 0
SDF2L1-201ENST00000248958 SPINK6Q6UWN8 80 aa15.06■□□□□ 0
SDF2L1-201ENST00000248958 PSORS1C2Q9UIG4 136 aa15.06■□□□□ 0
SDF2L1-201ENST00000248958 KRTAP7-1Q8IUC3 87 aa15.05■□□□□ -0
SDF2L1-201ENST00000248958 XAGE1AQ9HD64 81 aa15.05■□□□□ -0
SDF2L1-201ENST00000248958 TMEM223A0PJW6 202 aa15.04■□□□□ -0
SDF2L1-201ENST00000248958 NUPR1O60356 82 aa15.03■□□□□ -0
SDF2L1-201ENST00000248958 UBE2BP63146 152 aa15.02■□□□□ -0
SDF2L1-201ENST00000248958 PKHD1L1Q86WI1 4243 aa15.02□□□□□ -0.01
SDF2L1-201ENST00000248958 SRSF9Q13242 221 aaKnown RBP eCLIP15.01□□□□□ -0.01
SDF2L1-201ENST00000248958 COX17Q14061 63 aa15.01□□□□□ -0.01
SDF2L1-201ENST00000248958 C1orf137Q5JT78 98 aa15.01□□□□□ -0.01
SDF2L1-201ENST00000248958 H0Y8G0 127 aa15□□□□□ -0.01
SDF2L1-201ENST00000248958 HIST1H2BKO60814 126 aa15□□□□□ -0.01
SDF2L1-201ENST00000248958 HIST1H2BJP06899 126 aa15□□□□□ -0.01
SDF2L1-201ENST00000248958 HIST1H2BOP23527 126 aa15□□□□□ -0.01
SDF2L1-201ENST00000248958 HIST1H2BBP33778 126 aa15□□□□□ -0.01
SDF2L1-201ENST00000248958 HIST1H2BDP58876 126 aa15□□□□□ -0.01
SDF2L1-201ENST00000248958 HIST1H2BCP62807 126 aa15□□□□□ -0.01
SDF2L1-201ENST00000248958 HIST2H2BEQ16778 126 aa15□□□□□ -0.01
SDF2L1-201ENST00000248958 LBHQ53QV2 105 aaPredicted RBP15□□□□□ -0.01
SDF2L1-201ENST00000248958 HIST2H2BFQ5QNW6 126 aaPredicted RBP15□□□□□ -0.01
SDF2L1-201ENST00000248958 HIST1H2BHQ93079 126 aa15□□□□□ -0.01
SDF2L1-201ENST00000248958 HIST1H2BNQ99877 126 aa15□□□□□ -0.01
SDF2L1-201ENST00000248958 HIST1H2BMQ99879 126 aa15□□□□□ -0.01
SDF2L1-201ENST00000248958 TP73-AS1Q9UF72 201 aa15□□□□□ -0.01
SDF2L1-201ENST00000248958 PLA2G2DQ9UNK4 145 aa15□□□□□ -0.01
SDF2L1-201ENST00000248958 FABP4P15090 132 aa14.99□□□□□ -0.01
SDF2L1-201ENST00000248958 SERTAD4-AS1Q5TG53 156 aa14.99□□□□□ -0.01
SDF2L1-201ENST00000248958 ERG28Q9UKR5 140 aa14.99□□□□□ -0.01
SDF2L1-201ENST00000248958 C22orf24Q9Y442 160 aa14.99□□□□□ -0.01
SDF2L1-201ENST00000248958 PLNP26678 52 aa14.97□□□□□ -0.01
SDF2L1-201ENST00000248958 PFN2P35080 140 aa14.97□□□□□ -0.01
SDF2L1-201ENST00000248958 ZNF625Q96I27 306 aaPredicted RBP14.97□□□□□ -0.01
SDF2L1-201ENST00000248958 REG3GQ6UW15 175 aa14.96□□□□□ -0.01
SDF2L1-201ENST00000248958 MAP1LC3CQ9BXW4 147 aa14.96□□□□□ -0.01
SDF2L1-201ENST00000248958 LRP1Q07954 4544 aaKnown RBP14.96□□□□□ -0.01
SDF2L1-201ENST00000248958 FAT3Q8TDW7 4589 aa14.95□□□□□ -0.02
SDF2L1-201ENST00000248958 IGLV7-43P04211 117 aa14.94□□□□□ -0.02
SDF2L1-201ENST00000248958 MRPL55Q7Z7F7 128 aaKnown RBP14.94□□□□□ -0.02
SDF2L1-201ENST00000248958 KRTAP11-1Q8IUC1 163 aa14.94□□□□□ -0.02
SDF2L1-201ENST00000248958 IGLV5-37A0A075B6J1 123 aa14.92□□□□□ -0.02
SDF2L1-201ENST00000248958 DPM2O94777 84 aa14.92□□□□□ -0.02
SDF2L1-201ENST00000248958 S100A1P23297 94 aa14.91□□□□□ -0.02
SDF2L1-201ENST00000248958 HERV-K104P63124 156 aa14.9□□□□□ -0.02
SDF2L1-201ENST00000248958 LINC01600Q96MT4 127 aa14.9□□□□□ -0.02
SDF2L1-201ENST00000248958 SND1-IT1Q9HBX3 110 aa14.9□□□□□ -0.02
SDF2L1-201ENST00000248958 LINC00587B1AMM8 73 aa14.89□□□□□ -0.03
SDF2L1-201ENST00000248958 IGKCP01834 107 aa14.89□□□□□ -0.03
SDF2L1-201ENST00000248958 HERVK_113P61574 105 aa14.89□□□□□ -0.03
SDF2L1-201ENST00000248958 NKAPP1Q8N9T2 125 aa14.89□□□□□ -0.03
SDF2L1-201ENST00000248958 DIRC1Q969H9 104 aa14.88□□□□□ -0.03
SDF2L1-201ENST00000248958 LEPROTO15243 131 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms